RNA–Protein interactions for RNA: ENST00000547465.1

CASC18-201, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best)

Gene CASC18, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-201ENST00000547465 USTQ9Y2C2 406 aa6.59□□□□□ -1.35
CASC18-201ENST00000547465 CSB-PGBD3P0DP91 1061 aa6.58□□□□□ -1.36
CASC18-201ENST00000547465 HIC1Q14526 733 aa6.58□□□□□ -1.36
CASC18-201ENST00000547465 PPP1R15BQ5SWA1 713 aa6.58□□□□□ -1.36
CASC18-201ENST00000547465 WWC1Q8IX03 1113 aa6.58□□□□□ -1.36
CASC18-201ENST00000547465 ZNF579Q8NAF0 562 aaKnown RBP6.58□□□□□ -1.36
CASC18-201ENST00000547465 TSPYL2Q9H2G4 693 aaPredicted RBP6.58□□□□□ -1.36
CASC18-201ENST00000547465 PRKAR2AP13861 404 aaKnown RBP6.57□□□□□ -1.36
CASC18-201ENST00000547465 PROCA1Q8NCQ7 364 aaPredicted RBP6.57□□□□□ -1.36
CASC18-201ENST00000547465 PBXIP1Q96AQ6 731 aa6.57□□□□□ -1.36
CASC18-201ENST00000547465 CLEC11AQ9Y240 323 aa6.57□□□□□ -1.36
CASC18-201ENST00000547465 IVNS1ABPQ9Y6Y0 642 aa6.57□□□□□ -1.36
CASC18-201ENST00000547465 UNCXA6NJT0 531 aa6.56□□□□□ -1.36
CASC18-201ENST00000547465 FCHSD2O94868 740 aa6.56□□□□□ -1.36
CASC18-201ENST00000547465 FECHP22830 423 aa6.56□□□□□ -1.36
CASC18-201ENST00000547465 SNRKQ9NRH2 765 aa6.56□□□□□ -1.36
CASC18-201ENST00000547465 GRXCR2A6NFK2 248 aa6.55□□□□□ -1.36
CASC18-201ENST00000547465 CCDC125Q86Z20 511 aa6.55□□□□□ -1.36
CASC18-201ENST00000547465 BANK1Q8NDB2 785 aa6.55□□□□□ -1.36
CASC18-201ENST00000547465 REPIN1Q9BWE0 567 aaKnown RBP6.55□□□□□ -1.36
CASC18-201ENST00000547465 EMILIN3Q9NT22 766 aa6.55□□□□□ -1.36
CASC18-201ENST00000547465 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
CASC18-201ENST00000547465 GLMNQ92990 594 aa6.54□□□□□ -1.36
CASC18-201ENST00000547465 MS4A4AQ96JQ5 239 aa6.54□□□□□ -1.36
CASC18-201ENST00000547465 POLR3GLQ9BT43 218 aa6.54□□□□□ -1.36
CASC18-201ENST00000547465 IGSF5Q9NSI5 407 aa6.54□□□□□ -1.36
CASC18-201ENST00000547465 POLR3EQ9NVU0 708 aa6.54□□□□□ -1.36
CASC18-201ENST00000547465 GDPD2Q9HCC8 539 aa6.53□□□□□ -1.36
CASC18-201ENST00000547465 RBM47A0AV96 593 aaKnown RBP6.51□□□□□ -1.37
CASC18-201ENST00000547465 TBC1D12O60347 775 aa6.51□□□□□ -1.37
CASC18-201ENST00000547465 CANXP27824 592 aaKnown RBP6.51□□□□□ -1.37
CASC18-201ENST00000547465 CLCN1P35523 988 aa6.51□□□□□ -1.37
CASC18-201ENST00000547465 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.5□□□□□ -1.37
CASC18-201ENST00000547465 POM121CA8CG34 1229 aa6.5□□□□□ -1.37
CASC18-201ENST00000547465 RFX1P22670 979 aa6.5□□□□□ -1.37
CASC18-201ENST00000547465 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.5□□□□□ -1.37
CASC18-201ENST00000547465 GPHNQ9NQX3 736 aaPredicted RBP6.5□□□□□ -1.37
CASC18-201ENST00000547465 CARNS1A5YM72 827 aa6.49□□□□□ -1.37
CASC18-201ENST00000547465 SSTR3P32745 418 aaPredicted RBP6.49□□□□□ -1.37
CASC18-201ENST00000547465 RFC5P40937 340 aa6.49□□□□□ -1.37
CASC18-201ENST00000547465 ABL2P42684 1182 aa6.49□□□□□ -1.37
CASC18-201ENST00000547465 TMEM259Q4ZIN3 620 aa6.49□□□□□ -1.37
CASC18-201ENST00000547465 OTUD5Q96G74 571 aa6.49□□□□□ -1.37
CASC18-201ENST00000547465 BEGAINQ9BUH8 593 aa6.49□□□□□ -1.37
CASC18-201ENST00000547465 TMUB1Q9BVT8 246 aa6.49□□□□□ -1.37
CASC18-201ENST00000547465 OSBPP22059 807 aa6.48□□□□□ -1.37
CASC18-201ENST00000547465 VRTNQ9H8Y1 702 aa6.48□□□□□ -1.37
CASC18-201ENST00000547465 PRM3Q9NNZ6 103 aa6.48□□□□□ -1.37
CASC18-201ENST00000547465 GPCPD1Q9NPB8 672 aa6.48□□□□□ -1.37
CASC18-201ENST00000547465 MDM2Q00987 491 aaPredicted RBP6.47□□□□□ -1.37
CASC18-201ENST00000547465 IFNL1Q8IU54 200 aa6.47□□□□□ -1.37
CASC18-201ENST00000547465 CLK2P49760 499 aaKnown RBP6.46□□□□□ -1.38
CASC18-201ENST00000547465 MYSM1Q5VVJ2 828 aa6.46□□□□□ -1.38
CASC18-201ENST00000547465 MRRFQ96E11 262 aaKnown RBP6.46□□□□□ -1.38
CASC18-201ENST00000547465 MTMR14Q8NCE2 650 aa6.45□□□□□ -1.38
CASC18-201ENST00000547465 DRC1Q96MC2 740 aa6.45□□□□□ -1.38
CASC18-201ENST00000547465 KIAA1522Q9P206 1035 aaPredicted RBP6.45□□□□□ -1.38
CASC18-201ENST00000547465 PCDH10Q9P2E7 1040 aa6.45□□□□□ -1.38
CASC18-201ENST00000547465 CCDC61Q9Y6R9 512 aa6.45□□□□□ -1.38
CASC18-201ENST00000547465 SRPK2P78362 688 aaKnown RBP6.44□□□□□ -1.38
CASC18-201ENST00000547465 PTGDRQ13258 359 aa6.44□□□□□ -1.38
CASC18-201ENST00000547465 DSG2Q14126 1118 aa6.44□□□□□ -1.38
CASC18-201ENST00000547465 CFAP70Q5T0N1 1121 aa6.44□□□□□ -1.38
CASC18-201ENST00000547465 HDGFL1Q5TGJ6 251 aa6.44□□□□□ -1.38
CASC18-201ENST00000547465 DHX37Q8IY37 1157 aaKnown RBP6.44□□□□□ -1.38
CASC18-201ENST00000547465 SMARCA5O60264 1052 aaPredicted RBP6.43□□□□□ -1.38
CASC18-201ENST00000547465 BRD2P25440 801 aaKnown RBP6.43□□□□□ -1.38
CASC18-201ENST00000547465 GNEQ9Y223 722 aaKnown RBP6.43□□□□□ -1.38
CASC18-201ENST00000547465 MAP3K9P80192 1104 aa6.42□□□□□ -1.38
CASC18-201ENST00000547465 SPATA32Q96LK8 384 aa6.42□□□□□ -1.38
CASC18-201ENST00000547465 CWC22Q9HCG8 908 aaKnown RBP6.42□□□□□ -1.38
CASC18-201ENST00000547465 TBC1D2BQ9UPU7 963 aa6.42□□□□□ -1.38
CASC18-201ENST00000547465 TCF3P15923 654 aa6.41□□□□□ -1.38
CASC18-201ENST00000547465 ERCC3P19447 782 aa6.41□□□□□ -1.38
CASC18-201ENST00000547465 GOLGA2Q08379 1002 aa6.41□□□□□ -1.38
CASC18-201ENST00000547465 PPP2R2DQ66LE6 453 aa6.41□□□□□ -1.38
CASC18-201ENST00000547465 B4GALNT3Q6L9W6 998 aa6.41□□□□□ -1.38
CASC18-201ENST00000547465 TXNDC2Q86VQ3 553 aa6.41□□□□□ -1.38
CASC18-201ENST00000547465 SREK1Q8WXA9 508 aaKnown RBP6.41□□□□□ -1.38
CASC18-201ENST00000547465 DCBLD2Q96PD2 775 aa6.4□□□□□ -1.38
CASC18-201ENST00000547465 PPP1R12CQ9BZL4 782 aa6.4□□□□□ -1.38
CASC18-201ENST00000547465 FAM217BQ9NTX9 383 aaPredicted RBP6.4□□□□□ -1.38
CASC18-201ENST00000547465 TMEM88BA6NKF7 163 aa6.39□□□□□ -1.39
CASC18-201ENST00000547465 SOCS7O14512 581 aa6.39□□□□□ -1.39
CASC18-201ENST00000547465 NCLP19338 710 aaKnown RBP6.39□□□□□ -1.39
CASC18-201ENST00000547465 FBXO31Q5XUX0 539 aaPredicted RBP6.39□□□□□ -1.39
CASC18-201ENST00000547465 ADAMTS19Q8TE59 1207 aa6.39□□□□□ -1.39
CASC18-201ENST00000547465 DDX12PQ92771 950 aa6.39□□□□□ -1.39
CASC18-201ENST00000547465 C8orf37Q96NL8 207 aa6.39□□□□□ -1.39
CASC18-201ENST00000547465 POTEB2H3BUK9 544 aa6.38□□□□□ -1.39
CASC18-201ENST00000547465 MAP3K13O43283 966 aa6.38□□□□□ -1.39
CASC18-201ENST00000547465 ATG7O95352 703 aa6.38□□□□□ -1.39
CASC18-201ENST00000547465 ZNF16P17020 682 aaPredicted RBP6.38□□□□□ -1.39
CASC18-201ENST00000547465 LMOD1P29536 600 aaPredicted RBP6.38□□□□□ -1.39
CASC18-201ENST00000547465 DIXDC1Q155Q3 683 aa6.38□□□□□ -1.39
CASC18-201ENST00000547465 TSR1Q2NL82 804 aaKnown RBP6.38□□□□□ -1.39
CASC18-201ENST00000547465 CHADLQ6NUI6 762 aa6.38□□□□□ -1.39
CASC18-201ENST00000547465 CCER1Q8TC90 406 aaPredicted RBP6.38□□□□□ -1.39
CASC18-201ENST00000547465 SIRT1Q96EB6 747 aa6.38□□□□□ -1.39
CASC18-201ENST00000547465 PHOX2BQ99453 314 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms