RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 RRP7BPQ9NSQ0 103 aa14.23□□□□□ -0.13
NPAS3-205ENST00000547068 DENND4BO75064 1496 aaPredicted RBP14.23□□□□□ -0.13
NPAS3-205ENST00000547068 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
NPAS3-205ENST00000547068 DIP2BQ9P265 1576 aa14.23□□□□□ -0.13
NPAS3-205ENST00000547068 MS4A1P11836 297 aa14.22□□□□□ -0.13
NPAS3-205ENST00000547068 CDC42BPBQ9Y5S2 1711 aa14.22□□□□□ -0.13
NPAS3-205ENST00000547068 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
NPAS3-205ENST00000547068 POLR1AO95602 1720 aaPredicted RBP14.22□□□□□ -0.13
NPAS3-205ENST00000547068 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
NPAS3-205ENST00000547068 DDRGK1Q96HY6 314 aa14.2□□□□□ -0.14
NPAS3-205ENST00000547068 ZNF644Q9H582 1327 aaPredicted RBP14.2□□□□□ -0.14
NPAS3-205ENST00000547068 ARAP3Q8WWN8 1544 aa14.2□□□□□ -0.14
NPAS3-205ENST00000547068 RRP1P56182 461 aaKnown RBP14.2□□□□□ -0.14
NPAS3-205ENST00000547068 NBPF8Q3BBV2 869 aa14.2□□□□□ -0.14
NPAS3-205ENST00000547068 MPHOSPH9Q99550 1183 aa14.19□□□□□ -0.14
NPAS3-205ENST00000547068 SPATA31E1Q6ZUB1 1445 aa14.19□□□□□ -0.14
NPAS3-205ENST00000547068 CHIC2Q9UKJ5 165 aa14.19□□□□□ -0.14
NPAS3-205ENST00000547068 FANCAO15360 1455 aa14.19□□□□□ -0.14
NPAS3-205ENST00000547068 TCOF1Q13428 1488 aaKnown RBP14.19□□□□□ -0.14
NPAS3-205ENST00000547068 MAP3K4Q9Y6R4 1608 aa14.18□□□□□ -0.14
NPAS3-205ENST00000547068 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
NPAS3-205ENST00000547068 NFKBIBQ15653 356 aa14.18□□□□□ -0.14
NPAS3-205ENST00000547068 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
NPAS3-205ENST00000547068 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
NPAS3-205ENST00000547068 KIF13AQ9H1H9 1805 aa14.17□□□□□ -0.14
NPAS3-205ENST00000547068 FOXD1Q16676 465 aa14.17□□□□□ -0.14
NPAS3-205ENST00000547068 RSPH4AQ5TD94 716 aa14.17□□□□□ -0.14
NPAS3-205ENST00000547068 FRAT1Q92837 279 aaPredicted RBP14.17□□□□□ -0.14
NPAS3-205ENST00000547068 PLEKHH2Q8IVE3 1493 aa14.16□□□□□ -0.14
NPAS3-205ENST00000547068 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
NPAS3-205ENST00000547068 HNRNPMP52272 730 aaKnown RBP eCLIP14.16□□□□□ -0.14
NPAS3-205ENST00000547068 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
NPAS3-205ENST00000547068 TSPOAP1O95153 1857 aa14.15□□□□□ -0.14
NPAS3-205ENST00000547068 CFAP74Q9C0B2 1584 aa14.15□□□□□ -0.14
NPAS3-205ENST00000547068 POLR3GLQ9BT43 218 aa14.15□□□□□ -0.14
NPAS3-205ENST00000547068 SAMD9LQ8IVG5 1584 aa14.14□□□□□ -0.15
NPAS3-205ENST00000547068 TEX14Q8IWB6 1497 aa14.14□□□□□ -0.15
NPAS3-205ENST00000547068 TSPY4P0CV99 314 aa14.14□□□□□ -0.15
NPAS3-205ENST00000547068 TSPY10P0CW01 314 aa14.14□□□□□ -0.15
NPAS3-205ENST00000547068 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
NPAS3-205ENST00000547068 RCAN3Q9UKA8 241 aa14.13□□□□□ -0.15
NPAS3-205ENST00000547068 KIAA1107Q9UPP5 1409 aa14.13□□□□□ -0.15
NPAS3-205ENST00000547068 NEO1Q92859 1461 aa14.13□□□□□ -0.15
NPAS3-205ENST00000547068 KDM6BO15054 1643 aa14.12□□□□□ -0.15
NPAS3-205ENST00000547068 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
NPAS3-205ENST00000547068 DAXXQ9UER7 740 aaPredicted RBP14.12□□□□□ -0.15
NPAS3-205ENST00000547068 ADGRL1O94910 1474 aa14.12□□□□□ -0.15
NPAS3-205ENST00000547068 SCAPERQ9BY12 1400 aa14.11□□□□□ -0.15
NPAS3-205ENST00000547068 DAPK1P53355 1430 aa14.1□□□□□ -0.15
NPAS3-205ENST00000547068 SYCP2Q9BX26 1530 aa14.1□□□□□ -0.15
NPAS3-205ENST00000547068 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
NPAS3-205ENST00000547068 ABCC1P33527 1531 aa14.1□□□□□ -0.15
NPAS3-205ENST00000547068 SLC4A3P48751 1232 aa14.09□□□□□ -0.15
NPAS3-205ENST00000547068 FAM43AQ8N2R8 423 aa14.09□□□□□ -0.15
NPAS3-205ENST00000547068 DNMT1P26358 1616 aaKnown RBP14.09□□□□□ -0.15
NPAS3-205ENST00000547068 ABCC5O15440 1437 aa14.09□□□□□ -0.15
NPAS3-205ENST00000547068 MBD5Q9P267 1494 aa14.09□□□□□ -0.15
NPAS3-205ENST00000547068 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
NPAS3-205ENST00000547068 CCDC141Q6ZP82 1450 aa14.08□□□□□ -0.16
NPAS3-205ENST00000547068 LRPPRCP42704 1394 aaKnown RBP14.07□□□□□ -0.16
NPAS3-205ENST00000547068 PPRC1Q5VV67 1664 aaKnown RBP14.07□□□□□ -0.16
NPAS3-205ENST00000547068 ARHGEF12Q9NZN5 1544 aa14.07□□□□□ -0.16
NPAS3-205ENST00000547068 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
NPAS3-205ENST00000547068 SKAP1Q86WV1 359 aa14.06□□□□□ -0.16
NPAS3-205ENST00000547068 TRAPPC8Q9Y2L5 1435 aa14.06□□□□□ -0.16
NPAS3-205ENST00000547068 BCORL1Q5H9F3 1711 aa14.05□□□□□ -0.16
NPAS3-205ENST00000547068 SPAG9O60271 1321 aaKnown RBP14.05□□□□□ -0.16
NPAS3-205ENST00000547068 ARID4BQ4LE39 1312 aaPredicted RBP14.05□□□□□ -0.16
NPAS3-205ENST00000547068 USP47Q96K76 1375 aa14.05□□□□□ -0.16
NPAS3-205ENST00000547068 BRD4O60885 1362 aaPredicted RBP14.04□□□□□ -0.16
NPAS3-205ENST00000547068 C9orf84Q5VXU9 1444 aa14.04□□□□□ -0.16
NPAS3-205ENST00000547068 ZNF518AQ6AHZ1 1483 aa14.04□□□□□ -0.16
NPAS3-205ENST00000547068 ANKRD30AQ9BXX3 1397 aa14.03□□□□□ -0.16
NPAS3-205ENST00000547068 RAPGEF3O95398 923 aa14.03□□□□□ -0.16
NPAS3-205ENST00000547068 PDE3BQ13370 1112 aa14.03□□□□□ -0.16
NPAS3-205ENST00000547068 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
NPAS3-205ENST00000547068 ROCK2O75116 1388 aaKnown RBP14.03□□□□□ -0.16
NPAS3-205ENST00000547068 FRAT2O75474 233 aaPredicted RBP14.03□□□□□ -0.16
NPAS3-205ENST00000547068 CROCC2H7BZ55 1655 aa14.03□□□□□ -0.16
NPAS3-205ENST00000547068 KIF15Q9NS87 1388 aa14.02□□□□□ -0.16
NPAS3-205ENST00000547068 MYBBP1AQ9BQG0 1328 aaKnown RBP14.02□□□□□ -0.16
NPAS3-205ENST00000547068 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.16
NPAS3-205ENST00000547068 ROCK1Q13464 1354 aa14.02□□□□□ -0.17
NPAS3-205ENST00000547068 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
NPAS3-205ENST00000547068 POGZQ7Z3K3 1410 aa14.01□□□□□ -0.17
NPAS3-205ENST00000547068 PLIN1O60240 522 aa14.01□□□□□ -0.17
NPAS3-205ENST00000547068 ZNF326Q5BKZ1 582 aaKnown RBP14.01□□□□□ -0.17
NPAS3-205ENST00000547068 PKNOX2Q96KN3 472 aa14□□□□□ -0.17
NPAS3-205ENST00000547068 CRBNQ96SW2 442 aa14□□□□□ -0.17
NPAS3-205ENST00000547068 RTEL1-TNFRSF6BF6WH68 1400 aa14□□□□□ -0.17
NPAS3-205ENST00000547068 ADGBQ8N7X0 1667 aa13.99□□□□□ -0.17
NPAS3-205ENST00000547068 RALBP1Q15311 655 aa13.99□□□□□ -0.17
NPAS3-205ENST00000547068 MAST1Q9Y2H9 1570 aa13.99□□□□□ -0.17
NPAS3-205ENST00000547068 ADGRL2O95490 1459 aa13.98□□□□□ -0.17
NPAS3-205ENST00000547068 KTN1Q86UP2 1357 aaKnown RBP13.98□□□□□ -0.17
NPAS3-205ENST00000547068 CDCA7LQ96GN5 454 aa13.98□□□□□ -0.17
NPAS3-205ENST00000547068 RICTORQ6R327 1708 aa13.97□□□□□ -0.17
NPAS3-205ENST00000547068 FAM161AQ3B820 660 aa13.97□□□□□ -0.17
NPAS3-205ENST00000547068 KDM5CP41229 1560 aa13.96□□□□□ -0.17
NPAS3-205ENST00000547068 GLIPR1L2Q4G1C9 344 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms