RNA–Protein interactions for RNA: ENST00000547061.5

RACGAP1-208, Transcript of Rac GTPase activating protein 1, human

TSL 3

Gene RACGAP1, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-208	ENST00000547061	C3orf67	Q6ZVT6	689 aa		10.68	□□□□□ -0.7
RACGAP1-208	ENST00000547061	CTTNBP2	Q8WZ74	1663 aa		10.68	□□□□□ -0.7
RACGAP1-208	ENST00000547061	ATP10B	O94823	1461 aa		10.67	□□□□□ -0.7
RACGAP1-208	ENST00000547061	CD109	Q6YHK3	1445 aa		10.67	□□□□□ -0.7
RACGAP1-208	ENST00000547061	MAP3K4	Q9Y6R4	1608 aa		10.66	□□□□□ -0.7
RACGAP1-208	ENST00000547061	SAMD9	Q5K651	1589 aa		10.66	□□□□□ -0.7
RACGAP1-208	ENST00000547061	PDCD7	Q8N8D1	485 aa	Known RBP	10.66	□□□□□ -0.7
RACGAP1-208	ENST00000547061	KDM6B	O15054	1643 aa		10.66	□□□□□ -0.7
RACGAP1-208	ENST00000547061	POTEB2	H3BUK9	544 aa		10.65	□□□□□ -0.7
RACGAP1-208	ENST00000547061	PHF8	Q9UPP1	1060 aa		10.65	□□□□□ -0.7
RACGAP1-208	ENST00000547061	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.65	□□□□□ -0.7
RACGAP1-208	ENST00000547061	RYDEN	Q9NUL5	291 aa	Known RBP	10.64	□□□□□ -0.71
RACGAP1-208	ENST00000547061	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.64	□□□□□ -0.71
RACGAP1-208	ENST00000547061	EFCAB5	A4FU69	1503 aa		10.63	□□□□□ -0.71
RACGAP1-208	ENST00000547061	ARAP3	Q8WWN8	1544 aa		10.63	□□□□□ -0.71
RACGAP1-208	ENST00000547061	KIF21B	O75037	1637 aa		10.63	□□□□□ -0.71
RACGAP1-208	ENST00000547061	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.62	□□□□□ -0.71
RACGAP1-208	ENST00000547061	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.62	□□□□□ -0.71
RACGAP1-208	ENST00000547061	PPRC1	Q5VV67	1664 aa	Known RBP	10.61	□□□□□ -0.71
RACGAP1-208	ENST00000547061	KDM4F	A0A1W2PPD8	638 aa		10.61	□□□□□ -0.71
RACGAP1-208	ENST00000547061	PLEKHD1	A6NEE1	506 aa		10.61	□□□□□ -0.71
RACGAP1-208	ENST00000547061	BOLA1	Q9Y3E2	137 aa		10.61	□□□□□ -0.71
RACGAP1-208	ENST00000547061	ILDR1	Q86SU0	546 aa	Predicted RBP	10.6	□□□□□ -0.71
RACGAP1-208	ENST00000547061	NEO1	Q92859	1461 aa		10.6	□□□□□ -0.71
RACGAP1-208	ENST00000547061	CFAP43	Q8NDM7	1665 aa		10.6	□□□□□ -0.71
RACGAP1-208	ENST00000547061	OTUD5	Q96G74	571 aa		10.59	□□□□□ -0.71
RACGAP1-208	ENST00000547061	FMN1	Q68DA7	1419 aa		10.58	□□□□□ -0.72
RACGAP1-208	ENST00000547061	NUP153	P49790	1475 aa	Known RBP	10.58	□□□□□ -0.72
RACGAP1-208	ENST00000547061	KCNH8	Q96L42	1107 aa		10.58	□□□□□ -0.72
RACGAP1-208	ENST00000547061	DPY19L2	Q6NUT2	758 aa		10.57	□□□□□ -0.72
RACGAP1-208	ENST00000547061	SLAIN1	Q8ND83	568 aa		10.57	□□□□□ -0.72
RACGAP1-208	ENST00000547061	MFRP	Q9BY79	579 aa		10.57	□□□□□ -0.72
RACGAP1-208	ENST00000547061	ABCA9	Q8IUA7	1624 aa		10.56	□□□□□ -0.72
RACGAP1-208	ENST00000547061	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.56	□□□□□ -0.72
RACGAP1-208	ENST00000547061	RAPGEF6	Q8TEU7	1601 aa		10.55	□□□□□ -0.72
RACGAP1-208	ENST00000547061	POTEJ	P0CG39	1038 aa		10.55	□□□□□ -0.72
RACGAP1-208	ENST00000547061	P3H3	Q8IVL6	736 aa		10.55	□□□□□ -0.72
RACGAP1-208	ENST00000547061	FBXO22	Q8NEZ5	403 aa		10.53	□□□□□ -0.72
RACGAP1-208	ENST00000547061	FHOD3	Q2V2M9	1422 aa		10.52	□□□□□ -0.73
RACGAP1-208	ENST00000547061	UBTF	P17480	764 aa	Known RBP	10.52	□□□□□ -0.73
RACGAP1-208	ENST00000547061	MICALL2	Q8IY33	904 aa		10.52	□□□□□ -0.73
RACGAP1-208	ENST00000547061	MS4A4A	Q96JQ5	239 aa		10.52	□□□□□ -0.73
RACGAP1-208	ENST00000547061	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.51	□□□□□ -0.73
RACGAP1-208	ENST00000547061	TSPOAP1	O95153	1857 aa		10.51	□□□□□ -0.73
RACGAP1-208	ENST00000547061	MAGI2	Q86UL8	1455 aa		10.5	□□□□□ -0.73
RACGAP1-208	ENST00000547061	PLCH2	O75038	1416 aa		10.5	□□□□□ -0.73
RACGAP1-208	ENST00000547061	ARHGAP35	Q9NRY4	1499 aa		10.49	□□□□□ -0.73
RACGAP1-208	ENST00000547061	SNPH	O15079	494 aa		10.48	□□□□□ -0.73
RACGAP1-208	ENST00000547061	ADGRL1	O94910	1474 aa		10.48	□□□□□ -0.73
RACGAP1-208	ENST00000547061	AKNA	Q7Z591	1439 aa		10.47	□□□□□ -0.73
RACGAP1-208	ENST00000547061	EFCAB2	Q5VUJ9	269 aa		10.46	□□□□□ -0.73
RACGAP1-208	ENST00000547061	BBX	Q8WY36	941 aa	Predicted RBP	10.46	□□□□□ -0.73
RACGAP1-208	ENST00000547061	DENND4B	O75064	1496 aa	Predicted RBP	10.46	□□□□□ -0.74
RACGAP1-208	ENST00000547061	FANCA	O15360	1455 aa		10.45	□□□□□ -0.74
RACGAP1-208	ENST00000547061	CASKIN1	Q8WXD9	1431 aa		10.45	□□□□□ -0.74
RACGAP1-208	ENST00000547061	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.45	□□□□□ -0.74
RACGAP1-208	ENST00000547061	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
RACGAP1-208	ENST00000547061	TRO	Q12816	1431 aa	Predicted RBP	10.44	□□□□□ -0.74
RACGAP1-208	ENST00000547061	RAPGEF3	O95398	923 aa		10.44	□□□□□ -0.74
RACGAP1-208	ENST00000547061	NKX1-1	Q15270	411 aa	Predicted RBP	10.44	□□□□□ -0.74
RACGAP1-208	ENST00000547061	CFAP74	Q9C0B2	1584 aa		10.43	□□□□□ -0.74
RACGAP1-208	ENST00000547061	ZMYM4	Q5VZL5	1548 aa		10.43	□□□□□ -0.74
RACGAP1-208	ENST00000547061	CCDC18	Q5T9S5	1454 aa		10.42	□□□□□ -0.74
RACGAP1-208	ENST00000547061	CLIP1	P30622	1438 aa		10.42	□□□□□ -0.74
RACGAP1-208	ENST00000547061	HECW1	Q76N89	1606 aa		10.42	□□□□□ -0.74
RACGAP1-208	ENST00000547061	ARID3C	A6NKF2	412 aa		10.41	□□□□□ -0.74
RACGAP1-208	ENST00000547061	TMC2	Q8TDI7	906 aa		10.41	□□□□□ -0.74
RACGAP1-208	ENST00000547061	POGZ	Q7Z3K3	1410 aa		10.41	□□□□□ -0.74
RACGAP1-208	ENST00000547061	FYCO1	Q9BQS8	1478 aa		10.38	□□□□□ -0.75
RACGAP1-208	ENST00000547061	PPP1R37	O75864	691 aa		10.38	□□□□□ -0.75
RACGAP1-208	ENST00000547061	RANGAP1	P46060	587 aa	Predicted RBP	10.38	□□□□□ -0.75
RACGAP1-208	ENST00000547061	FAM163A	Q96GL9	167 aa	Predicted RBP	10.38	□□□□□ -0.75
RACGAP1-208	ENST00000547061	SCAPER	Q9BY12	1400 aa		10.38	□□□□□ -0.75
RACGAP1-208	ENST00000547061	FRMPD1	Q5SYB0	1578 aa		10.37	□□□□□ -0.75
RACGAP1-208	ENST00000547061	CDK13	Q14004	1512 aa	Known RBP	10.37	□□□□□ -0.75
RACGAP1-208	ENST00000547061	ZNF518A	Q6AHZ1	1483 aa		10.36	□□□□□ -0.75
RACGAP1-208	ENST00000547061	RIMBP2	O15034	1052 aa		10.36	□□□□□ -0.75
RACGAP1-208	ENST00000547061	GTPBP6	O43824	516 aa	Predicted RBP	10.36	□□□□□ -0.75
RACGAP1-208	ENST00000547061	SPRYD3	Q8NCJ5	442 aa		10.36	□□□□□ -0.75
RACGAP1-208	ENST00000547061	ATP10A	O60312	1499 aa		10.36	□□□□□ -0.75
RACGAP1-208	ENST00000547061	PTPRM	P28827	1452 aa		10.36	□□□□□ -0.75
RACGAP1-208	ENST00000547061	MLH3	Q9UHC1	1453 aa		10.36	□□□□□ -0.75
RACGAP1-208	ENST00000547061	ADAMTSL3	P82987	1691 aa		10.35	□□□□□ -0.75
RACGAP1-208	ENST00000547061	KIAA1107	Q9UPP5	1409 aa		10.35	□□□□□ -0.75
RACGAP1-208	ENST00000547061	ARHGEF40	Q8TER5	1519 aa		10.35	□□□□□ -0.75
RACGAP1-208	ENST00000547061	ZNF710	Q8N1W2	664 aa		10.35	□□□□□ -0.75
RACGAP1-208	ENST00000547061	TTC37	Q6PGP7	1564 aa		10.35	□□□□□ -0.75
RACGAP1-208	ENST00000547061	DOK7	Q18PE1	504 aa		10.34	□□□□□ -0.75
RACGAP1-208	ENST00000547061	KIF14	Q15058	1648 aa		10.33	□□□□□ -0.76
RACGAP1-208	ENST00000547061	RICTOR	Q6R327	1708 aa		10.33	□□□□□ -0.76
RACGAP1-208	ENST00000547061	RSPH4A	Q5TD94	716 aa		10.33	□□□□□ -0.76
RACGAP1-208	ENST00000547061	CFAP44	Q96MT7	982 aa		10.33	□□□□□ -0.76
RACGAP1-208	ENST00000547061	RERE	Q9P2R6	1566 aa		10.33	□□□□□ -0.76
RACGAP1-208	ENST00000547061	ZFYVE16	Q7Z3T8	1539 aa		10.33	□□□□□ -0.76
RACGAP1-208	ENST00000547061	KDM5C	P41229	1560 aa		10.32	□□□□□ -0.76
RACGAP1-208	ENST00000547061	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.32	□□□□□ -0.76
RACGAP1-208	ENST00000547061	C9orf84	Q5VXU9	1444 aa		10.32	□□□□□ -0.76
RACGAP1-208	ENST00000547061	PLEKHH2	Q8IVE3	1493 aa		10.31	□□□□□ -0.76
RACGAP1-208	ENST00000547061	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.31	□□□□□ -0.76
RACGAP1-208	ENST00000547061	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms