RNA–Protein interactions for RNA: ENST00000546741.2

PKP2-204, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-204ENST00000546741 NEUROD1Q13562 356 aa21.53■■□□□ 1.04
PKP2-204ENST00000546741 DEPDC5O75140 1603 aa21.52■■□□□ 1.04
PKP2-204ENST00000546741 EIF2AK4Q9P2K8 1649 aaKnown RBP21.52■■□□□ 1.04
PKP2-204ENST00000546741 TSPOAP1O95153 1857 aa21.51■■□□□ 1.03
PKP2-204ENST00000546741 DHX29Q7Z478 1369 aaKnown RBP21.5■■□□□ 1.03
PKP2-204ENST00000546741 FRMPD1Q5SYB0 1578 aa21.49■■□□□ 1.03
PKP2-204ENST00000546741 TEX14Q8IWB6 1497 aa21.48■■□□□ 1.03
PKP2-204ENST00000546741 PKD2Q13563 968 aa21.47■■□□□ 1.03
PKP2-204ENST00000546741 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
PKP2-204ENST00000546741 RPRD2Q5VT52 1461 aaKnown RBP21.46■■□□□ 1.03
PKP2-204ENST00000546741 VWDEQ8N2E2 1590 aa21.45■■□□□ 1.02
PKP2-204ENST00000546741 BCORL1Q5H9F3 1711 aa21.44■■□□□ 1.02
PKP2-204ENST00000546741 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
PKP2-204ENST00000546741 MROH1Q8NDA8 1641 aa21.44■■□□□ 1.02
PKP2-204ENST00000546741 ZMYM4Q5VZL5 1548 aa21.43■■□□□ 1.02
PKP2-204ENST00000546741 A2MP01023 1474 aa21.43■■□□□ 1.02
PKP2-204ENST00000546741 PPP1R15AO75807 674 aaPredicted RBP21.43■■□□□ 1.02
PKP2-204ENST00000546741 TONSLQ96HA7 1378 aa21.42■■□□□ 1.02
PKP2-204ENST00000546741 DIP2CQ9Y2E4 1556 aa21.42■■□□□ 1.02
PKP2-204ENST00000546741 PRDM15P57071 1507 aaPredicted RBP21.41■■□□□ 1.02
PKP2-204ENST00000546741 RNF17Q9BXT8 1623 aaKnown RBP21.41■■□□□ 1.02
PKP2-204ENST00000546741 MYT1LQ9UL68 1186 aa21.38■■□□□ 1.01
PKP2-204ENST00000546741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.37■■□□□ 1.01
PKP2-204ENST00000546741 TET3O43151 1660 aa21.36■■□□□ 1.01
PKP2-204ENST00000546741 ATP10AO60312 1499 aa21.36■■□□□ 1.01
PKP2-204ENST00000546741 E9PCH4 1651 aa21.35■■□□□ 1.01
PKP2-204ENST00000546741 PLA2R1Q13018 1463 aa21.35■■□□□ 1.01
PKP2-204ENST00000546741 KIF3BO15066 747 aa21.35■■□□□ 1.01
PKP2-204ENST00000546741 DNAJC5Q9H3Z4 198 aa21.35■■□□□ 1.01
PKP2-204ENST00000546741 ZNF316A6NFI3 1004 aaPredicted RBP21.34■■□□□ 1.01
PKP2-204ENST00000546741 YEATS2Q9ULM3 1422 aa21.34■■□□□ 1.01
PKP2-204ENST00000546741 COL17A1Q9UMD9 1497 aaPredicted RBP21.34■■□□□ 1.01
PKP2-204ENST00000546741 LMTK2Q8IWU2 1503 aa21.32■■□□□ 1
PKP2-204ENST00000546741 L3MBTL2Q969R5 705 aa21.31■■□□□ 1
PKP2-204ENST00000546741 REREQ9P2R6 1566 aa21.29■■□□□ 1
PKP2-204ENST00000546741 KANK1Q14678 1352 aa21.29■■□□□ 1
PKP2-204ENST00000546741 PTPRTO14522 1441 aa21.27■□□□□ 0.99
PKP2-204ENST00000546741 CEP152O94986 1710 aa21.27■□□□□ 0.99
PKP2-204ENST00000546741 SPHKAPQ2M3C7 1700 aa21.25■□□□□ 0.99
PKP2-204ENST00000546741 EFCAB6Q5THR3 1501 aa21.25■□□□□ 0.99
PKP2-204ENST00000546741 TRPM2O94759 1503 aa21.23■□□□□ 0.99
PKP2-204ENST00000546741 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
PKP2-204ENST00000546741 PIAS4Q8N2W9 510 aaPredicted RBP21.22■□□□□ 0.99
PKP2-204ENST00000546741 ABCC3O15438 1527 aa21.21■□□□□ 0.99
PKP2-204ENST00000546741 AGLP35573 1532 aa21.21■□□□□ 0.99
PKP2-204ENST00000546741 ARHGEF40Q8TER5 1519 aa21.2■□□□□ 0.99
PKP2-204ENST00000546741 SIGLEC1Q9BZZ2 1709 aa21.19■□□□□ 0.98
PKP2-204ENST00000546741 ZC3H13Q5T200 1668 aaKnown RBP21.19■□□□□ 0.98
PKP2-204ENST00000546741 NBPF8Q3BBV2 869 aa21.18■□□□□ 0.98
PKP2-204ENST00000546741 UHRF1BP1Q6BDS2 1440 aa21.17■□□□□ 0.98
PKP2-204ENST00000546741 CLTCL1P53675 1640 aa21.16■□□□□ 0.98
PKP2-204ENST00000546741 CAMSAP1Q5T5Y3 1602 aa21.16■□□□□ 0.98
PKP2-204ENST00000546741 GGT6Q6P531 493 aa21.15■□□□□ 0.98
PKP2-204ENST00000546741 NEURL4Q96JN8 1562 aa21.14■□□□□ 0.97
PKP2-204ENST00000546741 NPATQ14207 1427 aa21.14■□□□□ 0.97
PKP2-204ENST00000546741 SPATA31E1Q6ZUB1 1445 aa21.14■□□□□ 0.97
PKP2-204ENST00000546741 ARHGAP31Q2M1Z3 1444 aa21.11■□□□□ 0.97
PKP2-204ENST00000546741 WASHC2CQ9Y4E1 1318 aa21.1■□□□□ 0.97
PKP2-204ENST00000546741 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
PKP2-204ENST00000546741 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
PKP2-204ENST00000546741 NOS1P29475 1434 aa21.06■□□□□ 0.96
PKP2-204ENST00000546741 CNTLNQ9NXG0 1405 aa21.06■□□□□ 0.96
PKP2-204ENST00000546741 UGGT1Q9NYU2 1555 aa21.06■□□□□ 0.96
PKP2-204ENST00000546741 KIF1BO60333 1816 aa21.05■□□□□ 0.96
PKP2-204ENST00000546741 RALGAPBQ86X10 1494 aa21.05■□□□□ 0.96
PKP2-204ENST00000546741 CFAP65Q6ZU64 1925 aaKnown RBP21.04■□□□□ 0.96
PKP2-204ENST00000546741 DCAF11Q8TEB1 546 aa21.04■□□□□ 0.96
PKP2-204ENST00000546741 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
PKP2-204ENST00000546741 PIK3C2BO00750 1634 aa21.03■□□□□ 0.96
PKP2-204ENST00000546741 SYNMO15061 1565 aa21.02■□□□□ 0.96
PKP2-204ENST00000546741 TRPM1Q7Z4N2 1603 aa21.02■□□□□ 0.96
PKP2-204ENST00000546741 RGL3Q3MIN7 710 aa21.02■□□□□ 0.95
PKP2-204ENST00000546741 MROH2AA6NES4 1674 aa21.01■□□□□ 0.95
PKP2-204ENST00000546741 PREX1Q8TCU6 1659 aa21.01■□□□□ 0.95
PKP2-204ENST00000546741 ADGRB3O60242 1522 aa20.99■□□□□ 0.95
PKP2-204ENST00000546741 CLTCQ00610 1675 aaKnown RBP20.99■□□□□ 0.95
PKP2-204ENST00000546741 IFT172Q9UG01 1749 aa20.99■□□□□ 0.95
PKP2-204ENST00000546741 KDM2AQ9Y2K7 1162 aa20.98■□□□□ 0.95
PKP2-204ENST00000546741 HSPA5P11021 654 aaKnown RBP20.97■□□□□ 0.95
PKP2-204ENST00000546741 MADDQ8WXG6 1647 aa20.97■□□□□ 0.95
PKP2-204ENST00000546741 EIF4G2P78344 907 aaKnown RBP eCLIP20.97■□□□□ 0.95
PKP2-204ENST00000546741 HIRIP3Q9BW71 556 aaPredicted RBP20.97■□□□□ 0.95
PKP2-204ENST00000546741 STAC3Q96MF2 364 aa20.96■□□□□ 0.95
PKP2-204ENST00000546741 ZNF326Q5BKZ1 582 aaKnown RBP20.94■□□□□ 0.94
PKP2-204ENST00000546741 LAMC1P11047 1609 aa20.94■□□□□ 0.94
PKP2-204ENST00000546741 GPRASP1Q5JY77 1395 aa20.93■□□□□ 0.94
PKP2-204ENST00000546741 MYOM2P54296 1465 aa20.92■□□□□ 0.94
PKP2-204ENST00000546741 ERVK-7P63135 1459 aa20.92■□□□□ 0.94
PKP2-204ENST00000546741 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
PKP2-204ENST00000546741 PPLO60437 1756 aa20.9■□□□□ 0.94
PKP2-204ENST00000546741 POLR1AO95602 1720 aaPredicted RBP20.89■□□□□ 0.93
PKP2-204ENST00000546741 KIAA1210Q9ULL0 1709 aa20.89■□□□□ 0.93
PKP2-204ENST00000546741 NRXN1Q9ULB1 1477 aa20.89■□□□□ 0.93
PKP2-204ENST00000546741 USP47Q96K76 1375 aa20.88■□□□□ 0.93
PKP2-204ENST00000546741 SLC52A1Q9NWF4 448 aa20.88■□□□□ 0.93
PKP2-204ENST00000546741 MLECQ14165 292 aa20.87■□□□□ 0.93
PKP2-204ENST00000546741 ROCK2O75116 1388 aaKnown RBP20.86■□□□□ 0.93
PKP2-204ENST00000546741 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
PKP2-204ENST00000546741 IDI1Q13907 227 aa20.85■□□□□ 0.93
PKP2-204ENST00000546741 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms