RNA–Protein interactions for RNA: ENST00000546556.1

CPM-203, Transcript of carboxypeptidase M, humanhuman

TSL 2

Gene CPM, Length 697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-203ENST00000546556 NPDC1Q9NQX5 325 aaPredicted RBP11.73□□□□□ -0.53
CPM-203ENST00000546556 MAP3K7O43318 606 aa11.72□□□□□ -0.53
CPM-203ENST00000546556 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
CPM-203ENST00000546556 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
CPM-203ENST00000546556 FOSBP53539 338 aa11.7□□□□□ -0.54
CPM-203ENST00000546556 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
CPM-203ENST00000546556 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
CPM-203ENST00000546556 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
CPM-203ENST00000546556 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
CPM-203ENST00000546556 RBM33Q96EV2 1170 aaKnown RBP11.67□□□□□ -0.54
CPM-203ENST00000546556 CDHR5Q9HBB8 845 aa11.67□□□□□ -0.54
CPM-203ENST00000546556 GPR153Q6NV75 609 aa11.66□□□□□ -0.54
CPM-203ENST00000546556 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
CPM-203ENST00000546556 ZDHHC16Q969W1 377 aa11.66□□□□□ -0.54
CPM-203ENST00000546556 BICRAQ9NZM4 1560 aa11.64□□□□□ -0.55
CPM-203ENST00000546556 TSR1Q2NL82 804 aaKnown RBP11.64□□□□□ -0.55
CPM-203ENST00000546556 ARSIQ5FYB1 569 aa11.64□□□□□ -0.55
CPM-203ENST00000546556 PARP9Q8IXQ6 854 aa11.64□□□□□ -0.55
CPM-203ENST00000546556 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
CPM-203ENST00000546556 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
CPM-203ENST00000546556 NUDT7P0C024 238 aa11.63□□□□□ -0.55
CPM-203ENST00000546556 C6orf132Q5T0Z8 1188 aa11.63□□□□□ -0.55
CPM-203ENST00000546556 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
CPM-203ENST00000546556 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
CPM-203ENST00000546556 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
CPM-203ENST00000546556 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
CPM-203ENST00000546556 SNPHO15079 494 aa11.6□□□□□ -0.55
CPM-203ENST00000546556 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
CPM-203ENST00000546556 OATP04181 439 aa11.59□□□□□ -0.55
CPM-203ENST00000546556 TTLL12Q14166 644 aaPredicted RBP11.58□□□□□ -0.56
CPM-203ENST00000546556 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPM-203ENST00000546556 CLCN1P35523 988 aa11.56□□□□□ -0.56
CPM-203ENST00000546556 TTC13Q8NBP0 860 aa11.56□□□□□ -0.56
CPM-203ENST00000546556 TMUB1Q9BVT8 246 aa11.56□□□□□ -0.56
CPM-203ENST00000546556 ADAM33Q9BZ11 813 aa11.56□□□□□ -0.56
CPM-203ENST00000546556 PLEKHG3A1L390 1219 aa11.55□□□□□ -0.56
CPM-203ENST00000546556 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
CPM-203ENST00000546556 C14orf37Q86TY3 774 aa11.55□□□□□ -0.56
CPM-203ENST00000546556 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
CPM-203ENST00000546556 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
CPM-203ENST00000546556 LHX6Q9UPM6 363 aa11.54□□□□□ -0.56
CPM-203ENST00000546556 PRSS12P56730 875 aa11.53□□□□□ -0.56
CPM-203ENST00000546556 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
CPM-203ENST00000546556 PADI6Q6TGC4 694 aa11.52□□□□□ -0.57
CPM-203ENST00000546556 METTL3Q86U44 580 aaKnown RBP11.52□□□□□ -0.57
CPM-203ENST00000546556 BCL2L12Q9HB09 334 aa11.52□□□□□ -0.57
CPM-203ENST00000546556 HOXB1P14653 301 aaPredicted RBP11.51□□□□□ -0.57
CPM-203ENST00000546556 REPIN1Q9BWE0 567 aaKnown RBP11.51□□□□□ -0.57
CPM-203ENST00000546556 ADGRG1Q9Y653 693 aa11.51□□□□□ -0.57
CPM-203ENST00000546556 PXYLP1Q8TE99 480 aa11.5□□□□□ -0.57
CPM-203ENST00000546556 CDCA7LQ96GN5 454 aa11.5□□□□□ -0.57
CPM-203ENST00000546556 PHOX2BQ99453 314 aa11.5□□□□□ -0.57
CPM-203ENST00000546556 MS4A1P11836 297 aa11.49□□□□□ -0.57
CPM-203ENST00000546556 MDM2Q00987 491 aaPredicted RBP11.48□□□□□ -0.57
CPM-203ENST00000546556 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
CPM-203ENST00000546556 CECR2Q9BXF3 1484 aa11.46□□□□□ -0.57
CPM-203ENST00000546556 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
CPM-203ENST00000546556 PTPREP23469 700 aa11.46□□□□□ -0.57
CPM-203ENST00000546556 SSTR3P32745 418 aaPredicted RBP11.46□□□□□ -0.57
CPM-203ENST00000546556 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
CPM-203ENST00000546556 MYO15BQ96JP2 1530 aa11.45□□□□□ -0.58
CPM-203ENST00000546556 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
CPM-203ENST00000546556 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
CPM-203ENST00000546556 CC2D2AQ9P2K1 1620 aa11.43□□□□□ -0.58
CPM-203ENST00000546556 COL9A1P20849 921 aa11.43□□□□□ -0.58
CPM-203ENST00000546556 RSPH6AQ9H0K4 717 aa11.43□□□□□ -0.58
CPM-203ENST00000546556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.42□□□□□ -0.58
CPM-203ENST00000546556 POTEMA6NI47 508 aa11.42□□□□□ -0.58
CPM-203ENST00000546556 ONECUT3O60422 494 aaPredicted RBP11.42□□□□□ -0.58
CPM-203ENST00000546556 SH3D19Q5HYK7 790 aa11.4□□□□□ -0.58
CPM-203ENST00000546556 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
CPM-203ENST00000546556 EYA1Q99502 592 aa11.4□□□□□ -0.58
CPM-203ENST00000546556 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
CPM-203ENST00000546556 BEGAINQ9BUH8 593 aa11.39□□□□□ -0.59
CPM-203ENST00000546556 FAM198AQ9UFP1 575 aa11.39□□□□□ -0.59
CPM-203ENST00000546556 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
CPM-203ENST00000546556 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
CPM-203ENST00000546556 SKIV2LQ15477 1246 aaKnown RBP11.37□□□□□ -0.59
CPM-203ENST00000546556 PACS2Q86VP3 889 aa11.37□□□□□ -0.59
CPM-203ENST00000546556 KCNH8Q96L42 1107 aa11.37□□□□□ -0.59
CPM-203ENST00000546556 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
CPM-203ENST00000546556 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
CPM-203ENST00000546556 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
CPM-203ENST00000546556 FLIIQ13045 1269 aa11.34□□□□□ -0.59
CPM-203ENST00000546556 NUDT18Q6ZVK8 323 aa11.34□□□□□ -0.59
CPM-203ENST00000546556 NLRP7Q8WX94 980 aa11.34□□□□□ -0.59
CPM-203ENST00000546556 TATDN2Q93075 761 aa11.34□□□□□ -0.59
CPM-203ENST00000546556 PLSCR2Q9NRY7 297 aa11.34□□□□□ -0.59
CPM-203ENST00000546556 DNAJB2P25686 324 aa11.33□□□□□ -0.6
CPM-203ENST00000546556 EIF4G1Q04637 1599 aaKnown RBP11.33□□□□□ -0.6
CPM-203ENST00000546556 SCRIBQ14160 1630 aa11.32□□□□□ -0.6
CPM-203ENST00000546556 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
CPM-203ENST00000546556 PNMA3Q9UL41 463 aa11.32□□□□□ -0.6
CPM-203ENST00000546556 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
CPM-203ENST00000546556 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
CPM-203ENST00000546556 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
CPM-203ENST00000546556 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
CPM-203ENST00000546556 ZCCHC6Q5VYS8 1495 aaKnown RBP11.3□□□□□ -0.6
CPM-203ENST00000546556 ZBED2Q9BTP6 218 aa11.29□□□□□ -0.6
CPM-203ENST00000546556 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms