RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 TSPY10P0CW01 314 aa29.58■■■□□ 2.33
CHPT1-202ENST00000546490 PLA2R1Q13018 1463 aa29.58■■■□□ 2.33
CHPT1-202ENST00000546490 RNF17Q9BXT8 1623 aaKnown RBP29.58■■■□□ 2.33
CHPT1-202ENST00000546490 EIF2AK4Q9P2K8 1649 aaKnown RBP29.58■■■□□ 2.33
CHPT1-202ENST00000546490 KIF3BO15066 747 aa29.57■■■□□ 2.32
CHPT1-202ENST00000546490 KANK4Q5T7N3 995 aaPredicted RBP29.57■■■□□ 2.32
CHPT1-202ENST00000546490 CROCC2H7BZ55 1655 aa29.56■■■□□ 2.32
CHPT1-202ENST00000546490 ZC3H13Q5T200 1668 aaKnown RBP29.56■■■□□ 2.32
CHPT1-202ENST00000546490 PZPP20742 1482 aa29.55■■■□□ 2.32
CHPT1-202ENST00000546490 A2ML1A8K2U0 1454 aa29.52■■■□□ 2.32
CHPT1-202ENST00000546490 DNMT1P26358 1616 aaKnown RBP29.52■■■□□ 2.32
CHPT1-202ENST00000546490 POLR1AO95602 1720 aaPredicted RBP29.51■■■□□ 2.32
CHPT1-202ENST00000546490 LTBP4Q8N2S1 1624 aa29.51■■■□□ 2.31
CHPT1-202ENST00000546490 PTPN23Q9H3S7 1636 aa29.49■■■□□ 2.31
CHPT1-202ENST00000546490 TCOF1Q13428 1488 aaKnown RBP29.49■■■□□ 2.31
CHPT1-202ENST00000546490 APLP2Q06481 763 aa29.48■■■□□ 2.31
CHPT1-202ENST00000546490 WASHC2CQ9Y4E1 1318 aa29.46■■■□□ 2.31
CHPT1-202ENST00000546490 TNRQ92752 1358 aa29.46■■■□□ 2.31
CHPT1-202ENST00000546490 SHANK2Q9UPX8 1470 aa29.45■■■□□ 2.31
CHPT1-202ENST00000546490 IQSEC2Q5JU85 1478 aa29.44■■■□□ 2.3
CHPT1-202ENST00000546490 CEP152O94986 1710 aa29.44■■■□□ 2.3
CHPT1-202ENST00000546490 DUOX2Q9NRD8 1548 aa29.44■■■□□ 2.3
CHPT1-202ENST00000546490 MROH1Q8NDA8 1641 aa29.43■■■□□ 2.3
CHPT1-202ENST00000546490 PKD2Q13563 968 aa29.43■■■□□ 2.3
CHPT1-202ENST00000546490 ABCC3O15438 1527 aa29.43■■■□□ 2.3
CHPT1-202ENST00000546490 NCKAP5LQ9HCH0 1330 aa29.43■■■□□ 2.3
CHPT1-202ENST00000546490 NLRP1Q9C000 1473 aa29.38■■■□□ 2.29
CHPT1-202ENST00000546490 FBXO31Q5XUX0 539 aaPredicted RBP29.37■■■□□ 2.29
CHPT1-202ENST00000546490 FGD6Q6ZV73 1430 aa29.36■■■□□ 2.29
CHPT1-202ENST00000546490 SPATA31D1Q6ZQQ2 1576 aa29.35■■■□□ 2.29
CHPT1-202ENST00000546490 NEURL4Q96JN8 1562 aa29.35■■■□□ 2.29
CHPT1-202ENST00000546490 PRDM15P57071 1507 aaPredicted RBP29.35■■■□□ 2.29
CHPT1-202ENST00000546490 ABCC5O15440 1437 aa29.34■■■□□ 2.29
CHPT1-202ENST00000546490 UGGT1Q9NYU2 1555 aa29.34■■■□□ 2.29
CHPT1-202ENST00000546490 KIF15Q9NS87 1388 aa29.33■■■□□ 2.29
CHPT1-202ENST00000546490 DAPK1P53355 1430 aa29.33■■■□□ 2.29
CHPT1-202ENST00000546490 ERBINQ96RT1 1412 aa29.33■■■□□ 2.29
CHPT1-202ENST00000546490 DEPDC5O75140 1603 aa29.31■■■□□ 2.28
CHPT1-202ENST00000546490 ZNF335Q9H4Z2 1342 aaPredicted RBP29.3■■■□□ 2.28
CHPT1-202ENST00000546490 CFAP65Q6ZU64 1925 aaKnown RBP29.3■■■□□ 2.28
CHPT1-202ENST00000546490 ERVK-7P63135 1459 aa29.29■■■□□ 2.28
CHPT1-202ENST00000546490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.23■■■□□ 2.276e-6■□□□□ 11
CHPT1-202ENST00000546490 UBR1Q8IWV7 1749 aa29.23■■■□□ 2.27
CHPT1-202ENST00000546490 IQGAP1P46940 1657 aa29.22■■■□□ 2.27
CHPT1-202ENST00000546490 THEMISQ8N1K5 641 aaPredicted RBP29.22■■■□□ 2.27
CHPT1-202ENST00000546490 RRP7BPQ9NSQ0 103 aa29.2■■■□□ 2.26
CHPT1-202ENST00000546490 CPS1P31327 1500 aa29.19■■■□□ 2.26
CHPT1-202ENST00000546490 MED14O60244 1454 aa29.18■■■□□ 2.26
CHPT1-202ENST00000546490 ANKRD30AQ9BXX3 1397 aa29.18■■■□□ 2.26
CHPT1-202ENST00000546490 ANKLE2Q86XL3 938 aa29.18■■■□□ 2.26
CHPT1-202ENST00000546490 ARHGAP31Q2M1Z3 1444 aa29.18■■■□□ 2.26
CHPT1-202ENST00000546490 NPHP4O75161 1426 aaPredicted RBP29.15■■■□□ 2.26
CHPT1-202ENST00000546490 ADGRL2O95490 1459 aa29.15■■■□□ 2.26
CHPT1-202ENST00000546490 KANK1Q14678 1352 aa29.14■■■□□ 2.26
CHPT1-202ENST00000546490 VWDEQ8N2E2 1590 aa29.14■■■□□ 2.26
CHPT1-202ENST00000546490 LMTK2Q8IWU2 1503 aa29.11■■■□□ 2.25
CHPT1-202ENST00000546490 CHIC2Q9UKJ5 165 aa29.1■■■□□ 2.25
CHPT1-202ENST00000546490 PIK3C2BO00750 1634 aa29.09■■■□□ 2.25
CHPT1-202ENST00000546490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.08■■■□□ 2.25
CHPT1-202ENST00000546490 KDM5AP29375 1690 aaKnown RBP29.08■■■□□ 2.25
CHPT1-202ENST00000546490 UBAP1LF5GYI3 381 aa29.07■■■□□ 2.24
CHPT1-202ENST00000546490 EFCAB6Q5THR3 1501 aa29.07■■■□□ 2.24
CHPT1-202ENST00000546490 SYNMO15061 1565 aa29.05■■■□□ 2.24
CHPT1-202ENST00000546490 SLIT1O75093 1534 aa29.04■■■□□ 2.24
CHPT1-202ENST00000546490 FAM50AQ14320 339 aaKnown RBP29.04■■■□□ 2.24
CHPT1-202ENST00000546490 SCAF11Q99590 1463 aaKnown RBP29.04■■■□□ 2.24
CHPT1-202ENST00000546490 STRCP1A6NGW2 1772 aa29.03■■■□□ 2.24
CHPT1-202ENST00000546490 ARHGAP23Q9P227 1491 aa29.03■■■□□ 2.24
CHPT1-202ENST00000546490 DISP3Q9P2K9 1392 aa28.98■■■□□ 2.23
CHPT1-202ENST00000546490 ANKRD50Q9ULJ7 1429 aa28.97■■■□□ 2.23
CHPT1-202ENST00000546490 TET3O43151 1660 aa28.96■■■□□ 2.23
CHPT1-202ENST00000546490 GCC2Q8IWJ2 1684 aa28.96■■■□□ 2.23
CHPT1-202ENST00000546490 UNC13BO14795 1591 aa28.95■■■□□ 2.22
CHPT1-202ENST00000546490 ADGRB3O60242 1522 aa28.94■■■□□ 2.22
CHPT1-202ENST00000546490 RPRD2Q5VT52 1461 aaKnown RBP28.92■■■□□ 2.22
CHPT1-202ENST00000546490 NOS1P29475 1434 aa28.92■■■□□ 2.22
CHPT1-202ENST00000546490 TOM1O60784 492 aa28.9■■■□□ 2.22
CHPT1-202ENST00000546490 TMEM2Q9UHN6 1383 aa28.89■■■□□ 2.22
CHPT1-202ENST00000546490 STAG3Q9UJ98 1225 aa28.89■■■□□ 2.22
CHPT1-202ENST00000546490 EID1Q9Y6B2 187 aa28.89■■■□□ 2.22
CHPT1-202ENST00000546490 LRRC7Q96NW7 1537 aa28.89■■■□□ 2.21
CHPT1-202ENST00000546490 TXNDC2Q86VQ3 553 aa28.88■■■□□ 2.21
CHPT1-202ENST00000546490 SCAF1Q9H7N4 1312 aaKnown RBP28.88■■■□□ 2.21
CHPT1-202ENST00000546490 MYO5BQ9ULV0 1848 aa28.86■■■□□ 2.21
CHPT1-202ENST00000546490 LTKP29376 864 aa28.86■■■□□ 2.21
CHPT1-202ENST00000546490 ALKQ9UM73 1620 aa28.85■■■□□ 2.21
CHPT1-202ENST00000546490 ROCK1Q13464 1354 aa28.84■■■□□ 2.21
CHPT1-202ENST00000546490 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
CHPT1-202ENST00000546490 PIP4K2BP78356 416 aa28.83■■■□□ 2.21
CHPT1-202ENST00000546490 IDI1Q13907 227 aa28.83■■■□□ 2.21
CHPT1-202ENST00000546490 IQGAP3Q86VI3 1631 aa28.83■■■□□ 2.21
CHPT1-202ENST00000546490 E9PCH4 1651 aa28.81■■■□□ 2.2
CHPT1-202ENST00000546490 SLC52A1Q9NWF4 448 aa28.79■■■□□ 2.2
CHPT1-202ENST00000546490 TMEM131LA2VDJ0 1609 aa28.76■■■□□ 2.19
CHPT1-202ENST00000546490 HSPA1LP34931 641 aa28.74■■■□□ 2.19
CHPT1-202ENST00000546490 NWD1Q149M9 1564 aa28.71■■■□□ 2.19
CHPT1-202ENST00000546490 ILDR2Q71H61 639 aa28.71■■■□□ 2.19
CHPT1-202ENST00000546490 MED1Q15648 1581 aaPredicted RBP28.71■■■□□ 2.19
CHPT1-202ENST00000546490 ZFYVE9O95405 1425 aa28.68■■■□□ 2.18
CHPT1-202ENST00000546490 ITGAEP38570 1179 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms