RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 CEP170BQ9Y4F5 1589 aaPredicted RBP11.85□□□□□ -0.51
KDM1B-203ENST00000546309 PCGF6Q9BYE7 350 aa11.85□□□□□ -0.51
KDM1B-203ENST00000546309 CCDC141Q6ZP82 1450 aa11.84□□□□□ -0.51
KDM1B-203ENST00000546309 DISP3Q9P2K9 1392 aa11.84□□□□□ -0.51
KDM1B-203ENST00000546309 ZNF335Q9H4Z2 1342 aaPredicted RBP11.83□□□□□ -0.52
KDM1B-203ENST00000546309 ALKQ9UM73 1620 aa11.82□□□□□ -0.52
KDM1B-203ENST00000546309 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
KDM1B-203ENST00000546309 KIF3BO15066 747 aa11.81□□□□□ -0.52
KDM1B-203ENST00000546309 RNF17Q9BXT8 1623 aaKnown RBP11.81□□□□□ -0.52
KDM1B-203ENST00000546309 PZPP20742 1482 aa11.8□□□□□ -0.52
KDM1B-203ENST00000546309 PLA2R1Q13018 1463 aa11.8□□□□□ -0.52
KDM1B-203ENST00000546309 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
KDM1B-203ENST00000546309 STRCP1A6NGW2 1772 aa11.79□□□□□ -0.52
KDM1B-203ENST00000546309 A2ML1A8K2U0 1454 aa11.79□□□□□ -0.52
KDM1B-203ENST00000546309 ILDR2Q71H61 639 aa11.79□□□□□ -0.52
KDM1B-203ENST00000546309 ABCC3O15438 1527 aa11.79□□□□□ -0.52
KDM1B-203ENST00000546309 ABCC5O15440 1437 aa11.78□□□□□ -0.52
KDM1B-203ENST00000546309 MYOM3Q5VTT5 1437 aa11.78□□□□□ -0.52
KDM1B-203ENST00000546309 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
KDM1B-203ENST00000546309 KDM5DQ9BY66 1539 aa11.77□□□□□ -0.52
KDM1B-203ENST00000546309 CEP152O94986 1710 aa11.77□□□□□ -0.53
KDM1B-203ENST00000546309 VWDEQ8N2E2 1590 aa11.76□□□□□ -0.53
KDM1B-203ENST00000546309 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
KDM1B-203ENST00000546309 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
KDM1B-203ENST00000546309 TNRQ92752 1358 aa11.75□□□□□ -0.53
KDM1B-203ENST00000546309 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
KDM1B-203ENST00000546309 RRBP1Q9P2E9 1410 aaKnown RBP11.75□□□□□ -0.53
KDM1B-203ENST00000546309 SPATA31D1Q6ZQQ2 1576 aa11.75□□□□□ -0.53
KDM1B-203ENST00000546309 POLR1AO95602 1720 aaPredicted RBP11.74□□□□□ -0.53
KDM1B-203ENST00000546309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
KDM1B-203ENST00000546309 PTPN23Q9H3S7 1636 aa11.72□□□□□ -0.53
KDM1B-203ENST00000546309 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
KDM1B-203ENST00000546309 SOCS7O14512 581 aa11.72□□□□□ -0.53
KDM1B-203ENST00000546309 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
KDM1B-203ENST00000546309 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.53
KDM1B-203ENST00000546309 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.53
KDM1B-203ENST00000546309 FAM135AQ9P2D6 1515 aa11.71□□□□□ -0.53
KDM1B-203ENST00000546309 IQSEC2Q5JU85 1478 aa11.71□□□□□ -0.53
KDM1B-203ENST00000546309 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
KDM1B-203ENST00000546309 DEPDC5O75140 1603 aa11.71□□□□□ -0.54
KDM1B-203ENST00000546309 MED14O60244 1454 aa11.7□□□□□ -0.54
KDM1B-203ENST00000546309 WASHC2CQ9Y4E1 1318 aa11.7□□□□□ -0.54
KDM1B-203ENST00000546309 PKD2Q13563 968 aa11.7□□□□□ -0.54
KDM1B-203ENST00000546309 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
KDM1B-203ENST00000546309 XIRP1Q702N8 1843 aaKnown RBP11.7□□□□□ -0.54
KDM1B-203ENST00000546309 DAPK1P53355 1430 aa11.69□□□□□ -0.54
KDM1B-203ENST00000546309 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
KDM1B-203ENST00000546309 LTKP29376 864 aa11.69□□□□□ -0.54
KDM1B-203ENST00000546309 UGGT1Q9NYU2 1555 aa11.68□□□□□ -0.54
KDM1B-203ENST00000546309 DUOX2Q9NRD8 1548 aa11.68□□□□□ -0.54
KDM1B-203ENST00000546309 UBAP1LF5GYI3 381 aa11.67□□□□□ -0.54
KDM1B-203ENST00000546309 RRP7BPQ9NSQ0 103 aa11.67□□□□□ -0.54
KDM1B-203ENST00000546309 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
KDM1B-203ENST00000546309 ARHGAP23Q9P227 1491 aa11.67□□□□□ -0.54
KDM1B-203ENST00000546309 SHANK2Q9UPX8 1470 aa11.67□□□□□ -0.54
KDM1B-203ENST00000546309 SYNMO15061 1565 aa11.67□□□□□ -0.54
KDM1B-203ENST00000546309 KIF15Q9NS87 1388 aa11.67□□□□□ -0.54
KDM1B-203ENST00000546309 TSPY4P0CV99 314 aa11.66□□□□□ -0.54
KDM1B-203ENST00000546309 TSPY10P0CW01 314 aa11.66□□□□□ -0.54
KDM1B-203ENST00000546309 ARHGAP31Q2M1Z3 1444 aa11.65□□□□□ -0.54
KDM1B-203ENST00000546309 IQGAP1P46940 1657 aa11.65□□□□□ -0.55
KDM1B-203ENST00000546309 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
KDM1B-203ENST00000546309 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
KDM1B-203ENST00000546309 CHIC2Q9UKJ5 165 aa11.64□□□□□ -0.55
KDM1B-203ENST00000546309 SCAF1Q9H7N4 1312 aaKnown RBP11.63□□□□□ -0.55
KDM1B-203ENST00000546309 SLIT1O75093 1534 aa11.63□□□□□ -0.55
KDM1B-203ENST00000546309 LRRC7Q96NW7 1537 aa11.63□□□□□ -0.55
KDM1B-203ENST00000546309 ADGRL2O95490 1459 aa11.63□□□□□ -0.55
KDM1B-203ENST00000546309 ERBINQ96RT1 1412 aa11.62□□□□□ -0.55
KDM1B-203ENST00000546309 LMTK2Q8IWU2 1503 aa11.62□□□□□ -0.55
KDM1B-203ENST00000546309 NOS1P29475 1434 aa11.61□□□□□ -0.55
KDM1B-203ENST00000546309 MYO5BQ9ULV0 1848 aa11.61□□□□□ -0.55
KDM1B-203ENST00000546309 TET3O43151 1660 aa11.61□□□□□ -0.55
KDM1B-203ENST00000546309 HSPA1LP34931 641 aa11.6□□□□□ -0.55
KDM1B-203ENST00000546309 IDI1Q13907 227 aa11.6□□□□□ -0.55
KDM1B-203ENST00000546309 ANKLE2Q86XL3 938 aa11.6□□□□□ -0.55
KDM1B-203ENST00000546309 THEMISQ8N1K5 641 aaPredicted RBP11.6□□□□□ -0.55
KDM1B-203ENST00000546309 CPS1P31327 1500 aa11.6□□□□□ -0.55
KDM1B-203ENST00000546309 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
KDM1B-203ENST00000546309 EFCAB6Q5THR3 1501 aa11.57□□□□□ -0.56
KDM1B-203ENST00000546309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
KDM1B-203ENST00000546309 HRCP23327 699 aa11.56□□□□□ -0.56
KDM1B-203ENST00000546309 PIP4K2BP78356 416 aa11.56□□□□□ -0.56
KDM1B-203ENST00000546309 TMEM2Q9UHN6 1383 aa11.55□□□□□ -0.56
KDM1B-203ENST00000546309 ZFYVE9O95405 1425 aa11.54□□□□□ -0.56
KDM1B-203ENST00000546309 TOM1O60784 492 aa11.54□□□□□ -0.56
KDM1B-203ENST00000546309 ZEB1P37275 1124 aaPredicted RBP11.54□□□□□ -0.56
KDM1B-203ENST00000546309 RBM33Q96EV2 1170 aaKnown RBP11.54□□□□□ -0.56
KDM1B-203ENST00000546309 E9PCH4 1651 aa11.54□□□□□ -0.56
KDM1B-203ENST00000546309 KDM5AP29375 1690 aaKnown RBP11.54□□□□□ -0.56
KDM1B-203ENST00000546309 UNC13BO14795 1591 aa11.54□□□□□ -0.56
KDM1B-203ENST00000546309 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
KDM1B-203ENST00000546309 TXNDC2Q86VQ3 553 aa11.53□□□□□ -0.56
KDM1B-203ENST00000546309 MED1Q15648 1581 aaPredicted RBP11.53□□□□□ -0.56
KDM1B-203ENST00000546309 TMEM131LA2VDJ0 1609 aa11.53□□□□□ -0.56
KDM1B-203ENST00000546309 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.56
KDM1B-203ENST00000546309 PHF23Q9BUL5 403 aaPredicted RBP11.52□□□□□ -0.57
KDM1B-203ENST00000546309 RGS17Q9UGC6 210 aaPredicted RBP11.52□□□□□ -0.57
KDM1B-203ENST00000546309 ADGRB3O60242 1522 aa11.5□□□□□ -0.57
KDM1B-203ENST00000546309 GCC2Q8IWJ2 1684 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms