RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 OFD1O75665 1012 aa12.97□□□□□ -0.33
SOD2-216ENST00000546260 NEUROD2Q15784 382 aa12.97□□□□□ -0.33
SOD2-216ENST00000546260 MPHOSPH9Q99550 1183 aa12.97□□□□□ -0.33
SOD2-216ENST00000546260 COG6Q9Y2V7 657 aa12.96□□□□□ -0.33
SOD2-216ENST00000546260 CCDC18Q5T9S5 1454 aa12.96□□□□□ -0.34
SOD2-216ENST00000546260 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
SOD2-216ENST00000546260 ERBB4Q15303 1308 aa12.95□□□□□ -0.34
SOD2-216ENST00000546260 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
SOD2-216ENST00000546260 CENPJQ9HC77 1338 aaPredicted RBP12.95□□□□□ -0.34
SOD2-216ENST00000546260 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
SOD2-216ENST00000546260 PRDM4Q9UKN5 801 aa12.95□□□□□ -0.34
SOD2-216ENST00000546260 ARHGAP35Q9NRY4 1499 aa12.94□□□□□ -0.34
SOD2-216ENST00000546260 RNF214Q8ND24 703 aa12.94□□□□□ -0.34
SOD2-216ENST00000546260 DYNC1I1O14576 645 aa12.94□□□□□ -0.34
SOD2-216ENST00000546260 KIF15Q9NS87 1388 aa12.94□□□□□ -0.34
SOD2-216ENST00000546260 CLUAP1Q96AJ1 413 aa12.93□□□□□ -0.34
SOD2-216ENST00000546260 CAVIN1Q6NZI2 390 aaKnown RBP12.93□□□□□ -0.34
SOD2-216ENST00000546260 FMN1Q68DA7 1419 aa12.92□□□□□ -0.34
SOD2-216ENST00000546260 SEC24BO95487 1268 aa12.92□□□□□ -0.34
SOD2-216ENST00000546260 SASS6Q6UVJ0 657 aa12.92□□□□□ -0.34
SOD2-216ENST00000546260 CCDC94Q9BW85 323 aaPredicted RBP12.92□□□□□ -0.34
SOD2-216ENST00000546260 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
SOD2-216ENST00000546260 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
SOD2-216ENST00000546260 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
SOD2-216ENST00000546260 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
SOD2-216ENST00000546260 APPP05067 770 aa12.91□□□□□ -0.34
SOD2-216ENST00000546260 KCNJ4P48050 445 aa12.9□□□□□ -0.34
SOD2-216ENST00000546260 NBPF8Q3BBV2 869 aa12.9□□□□□ -0.34
SOD2-216ENST00000546260 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
SOD2-216ENST00000546260 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
SOD2-216ENST00000546260 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
SOD2-216ENST00000546260 PMFBP1Q8TBY8 1022 aa12.9□□□□□ -0.34
SOD2-216ENST00000546260 IPO4Q8TEX9 1081 aaKnown RBP12.9□□□□□ -0.34
SOD2-216ENST00000546260 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
SOD2-216ENST00000546260 FBLN2P98095 1184 aa12.89□□□□□ -0.35
SOD2-216ENST00000546260 RWDD1Q9H446 243 aaPredicted RBP12.89□□□□□ -0.35
SOD2-216ENST00000546260 CCDC39Q9UFE4 941 aa12.89□□□□□ -0.35
SOD2-216ENST00000546260 SMARCA2P51531 1590 aa12.89□□□□□ -0.35
SOD2-216ENST00000546260 LETM1O95202 739 aaPredicted RBP12.89□□□□□ -0.35
SOD2-216ENST00000546260 CUX2O14529 1486 aa12.89□□□□□ -0.35
SOD2-216ENST00000546260 TAF3Q5VWG9 929 aa12.89□□□□□ -0.35
SOD2-216ENST00000546260 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
SOD2-216ENST00000546260 RIPK4P57078 832 aa12.88□□□□□ -0.35
SOD2-216ENST00000546260 UACAQ9BZF9 1416 aa12.88□□□□□ -0.35
SOD2-216ENST00000546260 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
SOD2-216ENST00000546260 PDCL2Q8N4E4 241 aa12.87□□□□□ -0.35
SOD2-216ENST00000546260 DMTNQ08495 405 aa12.87□□□□□ -0.35
SOD2-216ENST00000546260 PANK1Q8TE04 598 aa12.87□□□□□ -0.35
SOD2-216ENST00000546260 GTPBP4Q9BZE4 634 aaKnown RBP12.87□□□□□ -0.35
SOD2-216ENST00000546260 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
SOD2-216ENST00000546260 FAM177BA6PVY3 158 aa12.87□□□□□ -0.35
SOD2-216ENST00000546260 USP47Q96K76 1375 aa12.87□□□□□ -0.35
SOD2-216ENST00000546260 ERICH4A6NGS2 130 aa12.87□□□□□ -0.35
SOD2-216ENST00000546260 KIF20AO95235 890 aa12.86□□□□□ -0.35
SOD2-216ENST00000546260 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
SOD2-216ENST00000546260 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
SOD2-216ENST00000546260 HMGN5P82970 282 aaKnown RBP12.86□□□□□ -0.35
SOD2-216ENST00000546260 TNPO1Q92973 898 aaKnown RBP12.86□□□□□ -0.35
SOD2-216ENST00000546260 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
SOD2-216ENST00000546260 ZNF777Q9ULD5 760 aaPredicted RBP12.86□□□□□ -0.35
SOD2-216ENST00000546260 TSC1Q92574 1164 aa12.85□□□□□ -0.35
SOD2-216ENST00000546260 KNSTRNQ9Y448 316 aa12.85□□□□□ -0.35
SOD2-216ENST00000546260 CGNL1Q0VF96 1302 aa12.85□□□□□ -0.35
SOD2-216ENST00000546260 KIF3AQ9Y496 699 aa12.84□□□□□ -0.35
SOD2-216ENST00000546260 BCAR3O75815 825 aa12.84□□□□□ -0.35
SOD2-216ENST00000546260 IRX3P78415 501 aaPredicted RBP12.84□□□□□ -0.35
SOD2-216ENST00000546260 NCOA1Q15788 1441 aa12.83□□□□□ -0.35
SOD2-216ENST00000546260 GAS2L3Q86XJ1 694 aa12.83□□□□□ -0.36
SOD2-216ENST00000546260 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
SOD2-216ENST00000546260 FOXD4L6Q3SYB3 417 aaPredicted RBP12.83□□□□□ -0.36
SOD2-216ENST00000546260 FOXD4L3Q6VB84 417 aaPredicted RBP12.83□□□□□ -0.36
SOD2-216ENST00000546260 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
SOD2-216ENST00000546260 RGL3Q3MIN7 710 aa12.83□□□□□ -0.36
SOD2-216ENST00000546260 TBC1D32Q96NH3 1257 aa12.82□□□□□ -0.36
SOD2-216ENST00000546260 BAZ1AQ9NRL2 1556 aaPredicted RBP12.82□□□□□ -0.36
SOD2-216ENST00000546260 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
SOD2-216ENST00000546260 IGHDP01880 384 aa12.81□□□□□ -0.36
SOD2-216ENST00000546260 CERS3Q8IU89 383 aa12.81□□□□□ -0.36
SOD2-216ENST00000546260 UTP14CQ5TAP6 766 aaKnown RBP12.81□□□□□ -0.36
SOD2-216ENST00000546260 DRC7Q8IY82 874 aa12.81□□□□□ -0.36
SOD2-216ENST00000546260 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
SOD2-216ENST00000546260 TERF1P54274 439 aa12.8□□□□□ -0.36
SOD2-216ENST00000546260 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
SOD2-216ENST00000546260 ZBTB22O15209 634 aa12.79□□□□□ -0.36
SOD2-216ENST00000546260 PRPF40AO75400 957 aaKnown RBP12.79□□□□□ -0.36
SOD2-216ENST00000546260 ERICH3Q5RHP9 1530 aa12.79□□□□□ -0.36
SOD2-216ENST00000546260 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
SOD2-216ENST00000546260 ZKSCAN5Q9Y2L8 839 aa12.79□□□□□ -0.36
SOD2-216ENST00000546260 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
SOD2-216ENST00000546260 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
SOD2-216ENST00000546260 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
SOD2-216ENST00000546260 LRRC9Q6ZRR7 1453 aa12.78□□□□□ -0.36
SOD2-216ENST00000546260 SSFA2P28290 1259 aa12.77□□□□□ -0.36
SOD2-216ENST00000546260 ZNF592Q92610 1267 aa12.77□□□□□ -0.36
SOD2-216ENST00000546260 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
SOD2-216ENST00000546260 APAF1O14727 1248 aa12.77□□□□□ -0.37
SOD2-216ENST00000546260 SYAP1Q96A49 352 aaPredicted RBP12.76□□□□□ -0.37
SOD2-216ENST00000546260 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
SOD2-216ENST00000546260 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
SOD2-216ENST00000546260 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms