RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, human

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-215	ENST00000546191	CDC42BPA	Q5VT25	1732 aa		13.23	□□□□□ -0.29
NEK6-215	ENST00000546191	SHANK2	Q9UPX8	1470 aa		13.23	□□□□□ -0.29
NEK6-215	ENST00000546191	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.23	□□□□□ -0.29
NEK6-215	ENST00000546191	FAM43A	Q8N2R8	423 aa		13.23	□□□□□ -0.29
NEK6-215	ENST00000546191	ABCA9	Q8IUA7	1624 aa		13.22	□□□□□ -0.29
NEK6-215	ENST00000546191	TRH	P20396	242 aa	Predicted RBP	13.22	□□□□□ -0.29
NEK6-215	ENST00000546191	USP35	Q9P2H5	1018 aa		13.22	□□□□□ -0.29
NEK6-215	ENST00000546191	PZP	P20742	1482 aa		13.21	□□□□□ -0.29
NEK6-215	ENST00000546191	TEX14	Q8IWB6	1497 aa		13.21	□□□□□ -0.3
NEK6-215	ENST00000546191	CDC42BPB	Q9Y5S2	1711 aa		13.21	□□□□□ -0.3
NEK6-215	ENST00000546191	ANP32A	P39687	249 aa	Known RBP	13.2	□□□□□ -0.3
NEK6-215	ENST00000546191	ANKRD30A	Q9BXX3	1397 aa		13.2	□□□□□ -0.3
NEK6-215	ENST00000546191	PPRC1	Q5VV67	1664 aa	Known RBP	13.2	□□□□□ -0.3
NEK6-215	ENST00000546191	MAP3K4	Q9Y6R4	1608 aa		13.2	□□□□□ -0.3
NEK6-215	ENST00000546191	ANP32C	O43423	234 aa		13.2	□□□□□ -0.3
NEK6-215	ENST00000546191	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.2	□□□□□ -0.3
NEK6-215	ENST00000546191	RRP9	O43818	475 aa	Known RBP	13.19	□□□□□ -0.3
NEK6-215	ENST00000546191	L3MBTL2	Q969R5	705 aa		13.19	□□□□□ -0.3
NEK6-215	ENST00000546191	MYO5C	Q9NQX4	1742 aa		13.18	□□□□□ -0.3
NEK6-215	ENST00000546191	GLI2	P10070	1586 aa		13.18	□□□□□ -0.3
NEK6-215	ENST00000546191	TAF7L	Q5H9L4	462 aa		13.18	□□□□□ -0.3
NEK6-215	ENST00000546191	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.18	□□□□□ -0.3
NEK6-215	ENST00000546191	CD109	Q6YHK3	1445 aa		13.18	□□□□□ -0.3
NEK6-215	ENST00000546191	PREX2	Q70Z35	1606 aa		13.17	□□□□□ -0.3
NEK6-215	ENST00000546191	ARHGEF5	Q12774	1597 aa		13.17	□□□□□ -0.3
NEK6-215	ENST00000546191	HSPA5	P11021	654 aa	Known RBP	13.16	□□□□□ -0.3
NEK6-215	ENST00000546191	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
NEK6-215	ENST00000546191	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.16	□□□□□ -0.3
NEK6-215	ENST00000546191	KIAA1107	Q9UPP5	1409 aa		13.16	□□□□□ -0.3
NEK6-215	ENST00000546191	GSE1	Q14687	1217 aa		13.16	□□□□□ -0.3
NEK6-215	ENST00000546191	LAS1L	Q9Y4W2	734 aa	Known RBP	13.16	□□□□□ -0.3
NEK6-215	ENST00000546191	ARHGAP5	Q13017	1502 aa		13.15	□□□□□ -0.3
NEK6-215	ENST00000546191	FOXD1	Q16676	465 aa		13.15	□□□□□ -0.3
NEK6-215	ENST00000546191	PPP4R2	Q9NY27	417 aa		13.15	□□□□□ -0.3
NEK6-215	ENST00000546191	ANKRD50	Q9ULJ7	1429 aa		13.15	□□□□□ -0.3
NEK6-215	ENST00000546191	KDM5D	Q9BY66	1539 aa		13.15	□□□□□ -0.3
NEK6-215	ENST00000546191	C9orf84	Q5VXU9	1444 aa		13.14	□□□□□ -0.31
NEK6-215	ENST00000546191	PLCH2	O75038	1416 aa		13.14	□□□□□ -0.31
NEK6-215	ENST00000546191	SAMD9L	Q8IVG5	1584 aa		13.14	□□□□□ -0.31
NEK6-215	ENST00000546191	MBD5	Q9P267	1494 aa		13.13	□□□□□ -0.31
NEK6-215	ENST00000546191	ARHGEF12	Q9NZN5	1544 aa		13.12	□□□□□ -0.31
NEK6-215	ENST00000546191	FANCA	O15360	1455 aa		13.12	□□□□□ -0.31
NEK6-215	ENST00000546191	SPATA31E1	Q6ZUB1	1445 aa		13.11	□□□□□ -0.31
NEK6-215	ENST00000546191	RSPH4A	Q5TD94	716 aa		13.11	□□□□□ -0.31
NEK6-215	ENST00000546191	NBPF8	Q3BBV2	869 aa		13.1	□□□□□ -0.31
NEK6-215	ENST00000546191	B4GALNT3	Q6L9W6	998 aa		13.1	□□□□□ -0.31
NEK6-215	ENST00000546191	PRDM4	Q9UKN5	801 aa		13.1	□□□□□ -0.31
NEK6-215	ENST00000546191	POLR1A	O95602	1720 aa	Predicted RBP	13.09	□□□□□ -0.31
NEK6-215	ENST00000546191	SYCP2	Q9BX26	1530 aa		13.09	□□□□□ -0.31
NEK6-215	ENST00000546191	CCDC141	Q6ZP82	1450 aa		13.09	□□□□□ -0.31
NEK6-215	ENST00000546191	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.09	□□□□□ -0.31
NEK6-215	ENST00000546191	CNTLN	Q9NXG0	1405 aa		13.09	□□□□□ -0.31
NEK6-215	ENST00000546191	TSPY4	P0CV99	314 aa		13.09	□□□□□ -0.31
NEK6-215	ENST00000546191	TSPY10	P0CW01	314 aa		13.09	□□□□□ -0.31
NEK6-215	ENST00000546191	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
NEK6-215	ENST00000546191	HSP90AA1	P07900	732 aa	Known RBP	13.08	□□□□□ -0.32
NEK6-215	ENST00000546191	FRAT1	Q92837	279 aa	Predicted RBP	13.08	□□□□□ -0.32
NEK6-215	ENST00000546191	CCDC7	Q96M83	1385 aa		13.08	□□□□□ -0.32
NEK6-215	ENST00000546191	MAST1	Q9Y2H9	1570 aa		13.08	□□□□□ -0.32
NEK6-215	ENST00000546191	PKD2	Q13563	968 aa		13.07	□□□□□ -0.32
NEK6-215	ENST00000546191	ABCC1	P33527	1531 aa		13.07	□□□□□ -0.32
NEK6-215	ENST00000546191	KIF15	Q9NS87	1388 aa		13.06	□□□□□ -0.32
NEK6-215	ENST00000546191	EFCAB2	Q5VUJ9	269 aa		13.06	□□□□□ -0.32
NEK6-215	ENST00000546191	UHRF1BP1	Q6BDS2	1440 aa		13.06	□□□□□ -0.32
NEK6-215	ENST00000546191	TRAPPC8	Q9Y2L5	1435 aa		13.06	□□□□□ -0.32
NEK6-215	ENST00000546191	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.06	□□□□□ -0.32
NEK6-215	ENST00000546191	ARAP3	Q8WWN8	1544 aa		13.06	□□□□□ -0.32
NEK6-215	ENST00000546191	ADGRL1	O94910	1474 aa		13.05	□□□□□ -0.32
NEK6-215	ENST00000546191	NUP155	O75694	1391 aa		13.05	□□□□□ -0.32
NEK6-215	ENST00000546191	RAPGEF3	O95398	923 aa		13.05	□□□□□ -0.32
NEK6-215	ENST00000546191	RGS3	P49796	1198 aa		13.05	□□□□□ -0.32
NEK6-215	ENST00000546191	DCAF11	Q8TEB1	546 aa		13.05	□□□□□ -0.32
NEK6-215	ENST00000546191	SCAPER	Q9BY12	1400 aa		13.04	□□□□□ -0.32
NEK6-215	ENST00000546191	AFAP1	Q8N556	730 aa		13.04	□□□□□ -0.32
NEK6-215	ENST00000546191	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.04	□□□□□ -0.32
NEK6-215	ENST00000546191	PPM1G	O15355	546 aa	Predicted RBP	13.04	□□□□□ -0.32
NEK6-215	ENST00000546191	NCBP3	Q53F19	620 aa	Known RBP	13.04	□□□□□ -0.32
NEK6-215	ENST00000546191	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.04	□□□□□ -0.32
NEK6-215	ENST00000546191	PLEKHH2	Q8IVE3	1493 aa		13.04	□□□□□ -0.32
NEK6-215	ENST00000546191	FRMPD1	Q5SYB0	1578 aa		13.03	□□□□□ -0.32
NEK6-215	ENST00000546191	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.03	□□□□□ -0.32
NEK6-215	ENST00000546191	NEO1	Q92859	1461 aa		13.02	□□□□□ -0.33
NEK6-215	ENST00000546191	BBX	Q8WY36	941 aa	Predicted RBP	13.01	□□□□□ -0.33
NEK6-215	ENST00000546191	PLXNC1	O60486	1568 aa		13.01	□□□□□ -0.33
NEK6-215	ENST00000546191	RALGAPB	Q86X10	1494 aa		13.01	□□□□□ -0.33
NEK6-215	ENST00000546191	RICTOR	Q6R327	1708 aa		13	□□□□□ -0.33
NEK6-215	ENST00000546191	CFAP74	Q9C0B2	1584 aa		13	□□□□□ -0.33
NEK6-215	ENST00000546191	UNC13B	O14795	1591 aa		13	□□□□□ -0.33
NEK6-215	ENST00000546191	KIF7	Q2M1P5	1343 aa		13	□□□□□ -0.33
NEK6-215	ENST00000546191	ARID4B	Q4LE39	1312 aa	Predicted RBP	13	□□□□□ -0.33
NEK6-215	ENST00000546191	CALD1	Q05682	793 aa	Known RBP	13	□□□□□ -0.33
NEK6-215	ENST00000546191	CHMP4B	Q9H444	224 aa	Known RBP	13	□□□□□ -0.33
NEK6-215	ENST00000546191	FAM135A	Q9P2D6	1515 aa		12.99	□□□□□ -0.33
NEK6-215	ENST00000546191	KDM5C	P41229	1560 aa		12.99	□□□□□ -0.33
NEK6-215	ENST00000546191	POGZ	Q7Z3K3	1410 aa		12.99	□□□□□ -0.33
NEK6-215	ENST00000546191	USP47	Q96K76	1375 aa		12.98	□□□□□ -0.33
NEK6-215	ENST00000546191	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.97	□□□□□ -0.33
NEK6-215	ENST00000546191	GTF2E1	P29083	439 aa	Predicted RBP	12.97	□□□□□ -0.33
NEK6-215	ENST00000546191	YEATS2	Q9ULM3	1422 aa		12.95	□□□□□ -0.34
NEK6-215	ENST00000546191	DUOX2	Q9NRD8	1548 aa		12.95	□□□□□ -0.34

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