RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-223ENST00000545605 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
SCNN1A-223ENST00000545605 TET3O43151 1660 aa17.14■□□□□ 0.33
SCNN1A-223ENST00000545605 A2MP01023 1474 aa17.14■□□□□ 0.33
SCNN1A-223ENST00000545605 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
SCNN1A-223ENST00000545605 AFAP1Q8N556 730 aa17.12■□□□□ 0.33
SCNN1A-223ENST00000545605 CEP152O94986 1710 aa17.11■□□□□ 0.33
SCNN1A-223ENST00000545605 DHX29Q7Z478 1369 aaKnown RBP17.08■□□□□ 0.32
SCNN1A-223ENST00000545605 E9PCH4 1651 aa17.07■□□□□ 0.32
SCNN1A-223ENST00000545605 AGLP35573 1532 aa17.07■□□□□ 0.32
SCNN1A-223ENST00000545605 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
SCNN1A-223ENST00000545605 EFCAB6Q5THR3 1501 aa17.06■□□□□ 0.32
SCNN1A-223ENST00000545605 LMTK2Q8IWU2 1503 aa17.06■□□□□ 0.32
SCNN1A-223ENST00000545605 YEATS2Q9ULM3 1422 aa17.06■□□□□ 0.32
SCNN1A-223ENST00000545605 SIGLEC1Q9BZZ2 1709 aa17.06■□□□□ 0.32
SCNN1A-223ENST00000545605 COL17A1Q9UMD9 1497 aaPredicted RBP17.05■□□□□ 0.32
SCNN1A-223ENST00000545605 CAMSAP1Q5T5Y3 1602 aa17.05■□□□□ 0.32
SCNN1A-223ENST00000545605 NUP155O75694 1391 aa17.02■□□□□ 0.31
SCNN1A-223ENST00000545605 ATP10AO60312 1499 aa17.01■□□□□ 0.31
SCNN1A-223ENST00000545605 RAPGEF3O95398 923 aa17.01■□□□□ 0.31
SCNN1A-223ENST00000545605 TRIM52Q96A61 297 aa17■□□□□ 0.31
SCNN1A-223ENST00000545605 ABCC3O15438 1527 aa16.99■□□□□ 0.31
SCNN1A-223ENST00000545605 TRPM2O94759 1503 aa16.99■□□□□ 0.31
SCNN1A-223ENST00000545605 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
SCNN1A-223ENST00000545605 RPRD2Q5VT52 1461 aaKnown RBP16.98■□□□□ 0.31
SCNN1A-223ENST00000545605 KANK1Q14678 1352 aa16.97■□□□□ 0.31
SCNN1A-223ENST00000545605 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
SCNN1A-223ENST00000545605 ANKRD30BQ9BXX2 1392 aa16.96■□□□□ 0.31
SCNN1A-223ENST00000545605 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
SCNN1A-223ENST00000545605 MROH2AA6NES4 1674 aa16.93■□□□□ 0.3
SCNN1A-223ENST00000545605 CLTCQ00610 1675 aaKnown RBP16.92■□□□□ 0.3
SCNN1A-223ENST00000545605 NEURL4Q96JN8 1562 aa16.92■□□□□ 0.3
SCNN1A-223ENST00000545605 CLTCL1P53675 1640 aa16.91■□□□□ 0.3
SCNN1A-223ENST00000545605 PREX1Q8TCU6 1659 aa16.91■□□□□ 0.3
SCNN1A-223ENST00000545605 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
SCNN1A-223ENST00000545605 KIF3BO15066 747 aa16.89■□□□□ 0.29
SCNN1A-223ENST00000545605 KIF1BO60333 1816 aa16.89■□□□□ 0.29
SCNN1A-223ENST00000545605 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
SCNN1A-223ENST00000545605 PKD2Q13563 968 aa16.88■□□□□ 0.29
SCNN1A-223ENST00000545605 FER1L4A9Z1Z3 1794 aa16.87■□□□□ 0.29
SCNN1A-223ENST00000545605 PTPRTO14522 1441 aa16.87■□□□□ 0.29
SCNN1A-223ENST00000545605 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
SCNN1A-223ENST00000545605 PLA2R1Q13018 1463 aa16.86■□□□□ 0.29
SCNN1A-223ENST00000545605 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
SCNN1A-223ENST00000545605 IFT172Q9UG01 1749 aa16.86■□□□□ 0.29
SCNN1A-223ENST00000545605 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
SCNN1A-223ENST00000545605 CCDC144AA2RUR9 1427 aa16.85■□□□□ 0.29
SCNN1A-223ENST00000545605 NPATQ14207 1427 aa16.84■□□□□ 0.29
SCNN1A-223ENST00000545605 SYNMO15061 1565 aa16.84■□□□□ 0.29
SCNN1A-223ENST00000545605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCNN1A-223ENST00000545605 CNTLNQ9NXG0 1405 aa16.82■□□□□ 0.28
SCNN1A-223ENST00000545605 ADGRB3O60242 1522 aa16.81■□□□□ 0.28
SCNN1A-223ENST00000545605 FOXD1Q16676 465 aa16.81■□□□□ 0.28
SCNN1A-223ENST00000545605 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
SCNN1A-223ENST00000545605 SIN3AQ96ST3 1273 aa16.8■□□□□ 0.28
SCNN1A-223ENST00000545605 NOS1P29475 1434 aa16.79■□□□□ 0.28
SCNN1A-223ENST00000545605 UGGT1Q9NYU2 1555 aa16.78■□□□□ 0.28
SCNN1A-223ENST00000545605 C3P01024 1663 aa16.76■□□□□ 0.27
SCNN1A-223ENST00000545605 KDM5AP29375 1690 aaKnown RBP16.76■□□□□ 0.27
SCNN1A-223ENST00000545605 ERVK-7P63135 1459 aa16.76■□□□□ 0.27
SCNN1A-223ENST00000545605 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
SCNN1A-223ENST00000545605 PPLO60437 1756 aa16.76■□□□□ 0.27
SCNN1A-223ENST00000545605 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
SCNN1A-223ENST00000545605 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
SCNN1A-223ENST00000545605 SPATA31E1Q6ZUB1 1445 aa16.75■□□□□ 0.27
SCNN1A-223ENST00000545605 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
SCNN1A-223ENST00000545605 MADDQ8WXG6 1647 aa16.74■□□□□ 0.27
SCNN1A-223ENST00000545605 GGT6Q6P531 493 aa16.74■□□□□ 0.27
SCNN1A-223ENST00000545605 WASHC2CQ9Y4E1 1318 aa16.73■□□□□ 0.27
SCNN1A-223ENST00000545605 MYO5BQ9ULV0 1848 aa16.73■□□□□ 0.27
SCNN1A-223ENST00000545605 ADAMTSL3P82987 1691 aa16.73■□□□□ 0.27
SCNN1A-223ENST00000545605 LAMC1P11047 1609 aa16.73■□□□□ 0.27
SCNN1A-223ENST00000545605 UHRF1BP1Q6BDS2 1440 aa16.71■□□□□ 0.27
SCNN1A-223ENST00000545605 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.27
SCNN1A-223ENST00000545605 RIMS1Q86UR5 1692 aaKnown RBP16.71■□□□□ 0.27
SCNN1A-223ENST00000545605 TMEM131LA2VDJ0 1609 aa16.7■□□□□ 0.26
SCNN1A-223ENST00000545605 MYOM2P54296 1465 aa16.7■□□□□ 0.26
SCNN1A-223ENST00000545605 RALGAPBQ86X10 1494 aa16.7■□□□□ 0.26
SCNN1A-223ENST00000545605 POLR1AO95602 1720 aaPredicted RBP16.68■□□□□ 0.26
SCNN1A-223ENST00000545605 MYO3AQ8NEV4 1616 aa16.66■□□□□ 0.26
SCNN1A-223ENST00000545605 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
SCNN1A-223ENST00000545605 ZNF142P52746 1687 aaPredicted RBP16.65■□□□□ 0.26
SCNN1A-223ENST00000545605 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
SCNN1A-223ENST00000545605 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
SCNN1A-223ENST00000545605 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
SCNN1A-223ENST00000545605 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
SCNN1A-223ENST00000545605 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
SCNN1A-223ENST00000545605 NRXN1Q9ULB1 1477 aa16.61■□□□□ 0.25
SCNN1A-223ENST00000545605 ARID4BQ4LE39 1312 aaPredicted RBP16.61■□□□□ 0.25
SCNN1A-223ENST00000545605 ZMYM3Q14202 1370 aa16.58■□□□□ 0.24
SCNN1A-223ENST00000545605 NLRP1Q9C000 1473 aa16.58■□□□□ 0.24
SCNN1A-223ENST00000545605 SETBP1Q9Y6X0 1596 aa16.57■□□□□ 0.24
SCNN1A-223ENST00000545605 MLECQ14165 292 aa16.57■□□□□ 0.24
SCNN1A-223ENST00000545605 ESF1Q9H501 851 aaKnown RBP16.56■□□□□ 0.24
SCNN1A-223ENST00000545605 STAC3Q96MF2 364 aa16.55■□□□□ 0.24
SCNN1A-223ENST00000545605 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
SCNN1A-223ENST00000545605 GPRASP1Q5JY77 1395 aa16.54■□□□□ 0.24
SCNN1A-223ENST00000545605 TNRQ92752 1358 aa16.54■□□□□ 0.24
SCNN1A-223ENST00000545605 SETD1AO15047 1707 aaKnown RBP16.54■□□□□ 0.24
SCNN1A-223ENST00000545605 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
SCNN1A-223ENST00000545605 CEP170BQ9Y4F5 1589 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms