RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 ITSN2Q9NZM3 1697 aa12.21□□□□□ -0.45
LDHA-224ENST00000545467 RNF17Q9BXT8 1623 aaKnown RBP12.21□□□□□ -0.46
LDHA-224ENST00000545467 NPHP4O75161 1426 aaPredicted RBP12.2□□□□□ -0.46
LDHA-224ENST00000545467 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
LDHA-224ENST00000545467 UBTFP17480 764 aaKnown RBP12.2□□□□□ -0.46
LDHA-224ENST00000545467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.19□□□□□ -0.46
LDHA-224ENST00000545467 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
LDHA-224ENST00000545467 TNRQ92752 1358 aa12.18□□□□□ -0.46
LDHA-224ENST00000545467 SAMD9LQ8IVG5 1584 aa12.18□□□□□ -0.46
LDHA-224ENST00000545467 A2MP01023 1474 aa12.18□□□□□ -0.46
LDHA-224ENST00000545467 FAM135BQ49AJ0 1406 aa12.18□□□□□ -0.46
LDHA-224ENST00000545467 FMN1Q68DA7 1419 aa12.18□□□□□ -0.46
LDHA-224ENST00000545467 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
LDHA-224ENST00000545467 PLXNC1O60486 1568 aa12.17□□□□□ -0.46
LDHA-224ENST00000545467 DEPDC5O75140 1603 aa12.16□□□□□ -0.46
LDHA-224ENST00000545467 PREX2Q70Z35 1606 aa12.16□□□□□ -0.46
LDHA-224ENST00000545467 FBXO31Q5XUX0 539 aaPredicted RBP12.16□□□□□ -0.46
LDHA-224ENST00000545467 SYNMO15061 1565 aa12.16□□□□□ -0.46
LDHA-224ENST00000545467 STRCP1A6NGW2 1772 aa12.14□□□□□ -0.47
LDHA-224ENST00000545467 FAM135AQ9P2D6 1515 aa12.13□□□□□ -0.47
LDHA-224ENST00000545467 ZNF777Q9ULD5 760 aaPredicted RBP12.13□□□□□ -0.47
LDHA-224ENST00000545467 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
LDHA-224ENST00000545467 ATP7AQ04656 1500 aa12.12□□□□□ -0.47
LDHA-224ENST00000545467 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
LDHA-224ENST00000545467 NLRP1Q9C000 1473 aa12.12□□□□□ -0.47
LDHA-224ENST00000545467 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
LDHA-224ENST00000545467 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
LDHA-224ENST00000545467 PZPP20742 1482 aa12.11□□□□□ -0.47
LDHA-224ENST00000545467 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
LDHA-224ENST00000545467 ZNF772Q68DY9 489 aaPredicted RBP12.09□□□□□ -0.47
LDHA-224ENST00000545467 SYCP2Q9BX26 1530 aa12.09□□□□□ -0.47
LDHA-224ENST00000545467 INO80Q9ULG1 1556 aaPredicted RBP12.08□□□□□ -0.48
LDHA-224ENST00000545467 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
LDHA-224ENST00000545467 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
LDHA-224ENST00000545467 PLEKHH2Q8IVE3 1493 aa12.07□□□□□ -0.48
LDHA-224ENST00000545467 JCADQ9P266 1359 aa12.06□□□□□ -0.48
LDHA-224ENST00000545467 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
LDHA-224ENST00000545467 WASHC2CQ9Y4E1 1318 aa12.06□□□□□ -0.48
LDHA-224ENST00000545467 KDM5DQ9BY66 1539 aa12.06□□□□□ -0.48
LDHA-224ENST00000545467 DHX29Q7Z478 1369 aaKnown RBP12.05□□□□□ -0.48
LDHA-224ENST00000545467 ADGBQ8N7X0 1667 aa12.04□□□□□ -0.48
LDHA-224ENST00000545467 RXRBP28702 533 aa12.04□□□□□ -0.48
LDHA-224ENST00000545467 GPATCH8Q9UKJ3 1502 aaKnown RBP12.04□□□□□ -0.48
LDHA-224ENST00000545467 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
LDHA-224ENST00000545467 KIF3BO15066 747 aa12.03□□□□□ -0.48
LDHA-224ENST00000545467 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
LDHA-224ENST00000545467 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.48
LDHA-224ENST00000545467 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.49
LDHA-224ENST00000545467 ROBO1Q9Y6N7 1651 aa12.02□□□□□ -0.49
LDHA-224ENST00000545467 LRRIQ1Q96JM4 1722 aa12.01□□□□□ -0.49
LDHA-224ENST00000545467 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
LDHA-224ENST00000545467 SPATA31A6Q5VVP1 1343 aa12.01□□□□□ -0.49
LDHA-224ENST00000545467 TMEM94Q12767 1356 aa12.01□□□□□ -0.49
LDHA-224ENST00000545467 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
LDHA-224ENST00000545467 CCDC18Q5T9S5 1454 aa12.01□□□□□ -0.49
LDHA-224ENST00000545467 LRRC9Q6ZRR7 1453 aa12.01□□□□□ -0.49
LDHA-224ENST00000545467 CDK12Q9NYV4 1490 aaPredicted RBP12.01□□□□□ -0.49
LDHA-224ENST00000545467 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
LDHA-224ENST00000545467 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
LDHA-224ENST00000545467 LTKP29376 864 aa11.99□□□□□ -0.49
LDHA-224ENST00000545467 APLP2Q06481 763 aa11.99□□□□□ -0.49
LDHA-224ENST00000545467 TXNDC2Q86VQ3 553 aa11.99□□□□□ -0.49
LDHA-224ENST00000545467 PPARGC1BQ86YN6 1023 aaKnown RBP11.98□□□□□ -0.49
LDHA-224ENST00000545467 KCNA6P17658 529 aa11.97□□□□□ -0.49
LDHA-224ENST00000545467 SLAIN2Q9P270 581 aa11.97□□□□□ -0.49
LDHA-224ENST00000545467 FGD6Q6ZV73 1430 aa11.96□□□□□ -0.49
LDHA-224ENST00000545467 PROSER2Q86WR7 435 aaPredicted RBP11.96□□□□□ -0.49
LDHA-224ENST00000545467 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
LDHA-224ENST00000545467 EID1Q9Y6B2 187 aa11.96□□□□□ -0.49
LDHA-224ENST00000545467 PHLPP1O60346 1717 aa11.96□□□□□ -0.49
LDHA-224ENST00000545467 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
LDHA-224ENST00000545467 CCNB3Q8WWL7 1395 aa11.95□□□□□ -0.5
LDHA-224ENST00000545467 LRP6O75581 1613 aa11.95□□□□□ -0.5
LDHA-224ENST00000545467 TIAM1Q13009 1591 aa11.95□□□□□ -0.5
LDHA-224ENST00000545467 ARHGAP23Q9P227 1491 aa11.95□□□□□ -0.5
LDHA-224ENST00000545467 MBD5Q9P267 1494 aa11.94□□□□□ -0.5
LDHA-224ENST00000545467 MSH6P52701 1360 aa11.93□□□□□ -0.5
LDHA-224ENST00000545467 SLIT1O75093 1534 aa11.93□□□□□ -0.5
LDHA-224ENST00000545467 NCOA2Q15596 1464 aa11.92□□□□□ -0.5
LDHA-224ENST00000545467 ZNF644Q9H582 1327 aaPredicted RBP11.91□□□□□ -0.5
LDHA-224ENST00000545467 ERVK-7P63135 1459 aa11.91□□□□□ -0.5
LDHA-224ENST00000545467 RBM33Q96EV2 1170 aaKnown RBP11.91□□□□□ -0.5
LDHA-224ENST00000545467 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
LDHA-224ENST00000545467 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
LDHA-224ENST00000545467 COL16A1Q07092 1604 aaPredicted RBP11.9□□□□□ -0.5
LDHA-224ENST00000545467 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
LDHA-224ENST00000545467 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
LDHA-224ENST00000545467 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
LDHA-224ENST00000545467 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
LDHA-224ENST00000545467 RSPH4AQ5TD94 716 aa11.89□□□□□ -0.51
LDHA-224ENST00000545467 AFF2P51816 1311 aa11.88□□□□□ -0.51
LDHA-224ENST00000545467 RRBP1Q9P2E9 1410 aaKnown RBP11.88□□□□□ -0.51
LDHA-224ENST00000545467 ABCC3O15438 1527 aa11.88□□□□□ -0.51
LDHA-224ENST00000545467 NUTM2BA6NNL0 878 aaPredicted RBP11.88□□□□□ -0.51
LDHA-224ENST00000545467 NUTM2EB1AL46 878 aaPredicted RBP11.88□□□□□ -0.51
LDHA-224ENST00000545467 NUTM2DQ5VT03 806 aaPredicted RBP11.88□□□□□ -0.51
LDHA-224ENST00000545467 NUTM2AQ8IVF1 878 aaPredicted RBP11.88□□□□□ -0.51
LDHA-224ENST00000545467 RGS12O14924 1447 aa11.87□□□□□ -0.51
LDHA-224ENST00000545467 TMEM2Q9UHN6 1383 aa11.87□□□□□ -0.51
LDHA-224ENST00000545467 NKTRP30414 1462 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms