RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
NPIPB4-221ENST00000545367 CDK11AQ9UQ88 783 aaPredicted RBP14.36□□□□□ -0.11
NPIPB4-221ENST00000545367 DNMT1P26358 1616 aaKnown RBP14.35□□□□□ -0.11
NPIPB4-221ENST00000545367 APLP2Q06481 763 aa14.35□□□□□ -0.11
NPIPB4-221ENST00000545367 CCDC18Q5T9S5 1454 aa14.35□□□□□ -0.11
NPIPB4-221ENST00000545367 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
NPIPB4-221ENST00000545367 CPS1P31327 1500 aa14.33□□□□□ -0.12
NPIPB4-221ENST00000545367 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
NPIPB4-221ENST00000545367 ZMYM3Q14202 1370 aa14.32□□□□□ -0.12
NPIPB4-221ENST00000545367 ALKQ9UM73 1620 aa14.31□□□□□ -0.12
NPIPB4-221ENST00000545367 HSPA1LP34931 641 aa14.31□□□□□ -0.12
NPIPB4-221ENST00000545367 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
NPIPB4-221ENST00000545367 A2MP01023 1474 aa14.3□□□□□ -0.12
NPIPB4-221ENST00000545367 VWDEQ8N2E2 1590 aa14.29□□□□□ -0.12
NPIPB4-221ENST00000545367 RNF17Q9BXT8 1623 aaKnown RBP14.29□□□□□ -0.12
NPIPB4-221ENST00000545367 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
NPIPB4-221ENST00000545367 PKD2Q13563 968 aa14.28□□□□□ -0.12
NPIPB4-221ENST00000545367 SYNMO15061 1565 aa14.27□□□□□ -0.12
NPIPB4-221ENST00000545367 STRCP1A6NGW2 1772 aa14.27□□□□□ -0.13
NPIPB4-221ENST00000545367 IQGAP1P46940 1657 aa14.26□□□□□ -0.13
NPIPB4-221ENST00000545367 SHANK2Q9UPX8 1470 aa14.25□□□□□ -0.13
NPIPB4-221ENST00000545367 CASKIN1Q8WXD9 1431 aa14.25□□□□□ -0.13
NPIPB4-221ENST00000545367 SPAG9O60271 1321 aaKnown RBP14.25□□□□□ -0.13
NPIPB4-221ENST00000545367 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
NPIPB4-221ENST00000545367 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
NPIPB4-221ENST00000545367 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
NPIPB4-221ENST00000545367 DEPDC5O75140 1603 aa14.23□□□□□ -0.13
NPIPB4-221ENST00000545367 KDM5DQ9BY66 1539 aa14.22□□□□□ -0.13
NPIPB4-221ENST00000545367 GPATCH8Q9UKJ3 1502 aaKnown RBP14.22□□□□□ -0.13
NPIPB4-221ENST00000545367 PLEKHH2Q8IVE3 1493 aa14.21□□□□□ -0.13
NPIPB4-221ENST00000545367 SETD1AO15047 1707 aaKnown RBP14.21□□□□□ -0.14
NPIPB4-221ENST00000545367 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
NPIPB4-221ENST00000545367 TOM1O60784 492 aa14.19□□□□□ -0.14
NPIPB4-221ENST00000545367 PZPP20742 1482 aa14.18□□□□□ -0.14
NPIPB4-221ENST00000545367 ZC3H13Q5T200 1668 aaKnown RBP14.18□□□□□ -0.14
NPIPB4-221ENST00000545367 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
NPIPB4-221ENST00000545367 GGT6Q6P531 493 aa14.18□□□□□ -0.14
NPIPB4-221ENST00000545367 FAM135AQ9P2D6 1515 aa14.18□□□□□ -0.14
NPIPB4-221ENST00000545367 TNRQ92752 1358 aa14.18□□□□□ -0.14
NPIPB4-221ENST00000545367 KIAA1107Q9UPP5 1409 aa14.17□□□□□ -0.14
NPIPB4-221ENST00000545367 HNRNPMP52272 730 aaKnown RBP eCLIP14.17□□□□□ -0.14
NPIPB4-221ENST00000545367 XIRP1Q702N8 1843 aaKnown RBP14.17□□□□□ -0.14
NPIPB4-221ENST00000545367 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
NPIPB4-221ENST00000545367 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
NPIPB4-221ENST00000545367 LRRC7Q96NW7 1537 aa14.13□□□□□ -0.15
NPIPB4-221ENST00000545367 MED14O60244 1454 aa14.12□□□□□ -0.15
NPIPB4-221ENST00000545367 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
NPIPB4-221ENST00000545367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.12□□□□□ -0.15
NPIPB4-221ENST00000545367 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
NPIPB4-221ENST00000545367 CCNB3Q8WWL7 1395 aa14.11□□□□□ -0.15
NPIPB4-221ENST00000545367 EHBP1L1Q8N3D4 1523 aa14.11□□□□□ -0.15
NPIPB4-221ENST00000545367 CEP152O94986 1710 aa14.11□□□□□ -0.15
NPIPB4-221ENST00000545367 UBR1Q8IWV7 1749 aa14.11□□□□□ -0.15
NPIPB4-221ENST00000545367 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
NPIPB4-221ENST00000545367 CAPN15O75808 1086 aa14.09□□□□□ -0.15
NPIPB4-221ENST00000545367 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
NPIPB4-221ENST00000545367 CCDC141Q6ZP82 1450 aa14.08□□□□□ -0.16
NPIPB4-221ENST00000545367 MBD5Q9P267 1494 aa14.08□□□□□ -0.16
NPIPB4-221ENST00000545367 FBXO31Q5XUX0 539 aaPredicted RBP14.08□□□□□ -0.16
NPIPB4-221ENST00000545367 CFAP65Q6ZU64 1925 aaKnown RBP14.07□□□□□ -0.16
NPIPB4-221ENST00000545367 ANKLE2Q86XL3 938 aa14.06□□□□□ -0.16
NPIPB4-221ENST00000545367 RTEL1-TNFRSF6BF6WH68 1400 aa14.06□□□□□ -0.16
NPIPB4-221ENST00000545367 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
NPIPB4-221ENST00000545367 ABCC3O15438 1527 aa14.05□□□□□ -0.16
NPIPB4-221ENST00000545367 ROBO1Q9Y6N7 1651 aa14.05□□□□□ -0.16
NPIPB4-221ENST00000545367 MTUS2Q5JR59 1369 aa14.05□□□□□ -0.16
NPIPB4-221ENST00000545367 DHX29Q7Z478 1369 aaKnown RBP14.05□□□□□ -0.16
NPIPB4-221ENST00000545367 ZNF644Q9H582 1327 aaPredicted RBP14.04□□□□□ -0.16
NPIPB4-221ENST00000545367 MIA2Q96PC5 1412 aa14.04□□□□□ -0.16
NPIPB4-221ENST00000545367 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
NPIPB4-221ENST00000545367 EIF2AK4Q9P2K8 1649 aaKnown RBP14.04□□□□□ -0.16
NPIPB4-221ENST00000545367 RGS17Q9UGC6 210 aaPredicted RBP14.03□□□□□ -0.16
NPIPB4-221ENST00000545367 ERVK-7P63135 1459 aa14.03□□□□□ -0.16
NPIPB4-221ENST00000545367 SCAF11Q99590 1463 aaKnown RBP14.02□□□□□ -0.16
NPIPB4-221ENST00000545367 KIF3BO15066 747 aa14.02□□□□□ -0.17
NPIPB4-221ENST00000545367 ARHGEF5Q12774 1597 aa14□□□□□ -0.17
NPIPB4-221ENST00000545367 THEMISQ8N1K5 641 aaPredicted RBP14□□□□□ -0.17
NPIPB4-221ENST00000545367 WASHC2CQ9Y4E1 1318 aa13.99□□□□□ -0.17
NPIPB4-221ENST00000545367 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
NPIPB4-221ENST00000545367 PIK3C2BO00750 1634 aa13.98□□□□□ -0.17
NPIPB4-221ENST00000545367 CEP162Q5TB80 1403 aa13.98□□□□□ -0.17
NPIPB4-221ENST00000545367 MAP3K1Q13233 1512 aa13.97□□□□□ -0.17
NPIPB4-221ENST00000545367 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.17
NPIPB4-221ENST00000545367 SLIT1O75093 1534 aa13.96□□□□□ -0.17
NPIPB4-221ENST00000545367 NCOA2Q15596 1464 aa13.96□□□□□ -0.17
NPIPB4-221ENST00000545367 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
NPIPB4-221ENST00000545367 ARHGAP23Q9P227 1491 aa13.95□□□□□ -0.18
NPIPB4-221ENST00000545367 POTEAQ6S8J7 498 aa13.94□□□□□ -0.18
NPIPB4-221ENST00000545367 DSG3P32926 999 aa13.93□□□□□ -0.18
NPIPB4-221ENST00000545367 CROCC2H7BZ55 1655 aa13.93□□□□□ -0.18
NPIPB4-221ENST00000545367 PRDM15P57071 1507 aaPredicted RBP13.93□□□□□ -0.18
NPIPB4-221ENST00000545367 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
NPIPB4-221ENST00000545367 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
NPIPB4-221ENST00000545367 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
NPIPB4-221ENST00000545367 COL16A1Q07092 1604 aaPredicted RBP13.9□□□□□ -0.18
NPIPB4-221ENST00000545367 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.19
NPIPB4-221ENST00000545367 NKTRP30414 1462 aaKnown RBP13.87□□□□□ -0.19
NPIPB4-221ENST00000545367 TMEM94Q12767 1356 aa13.87□□□□□ -0.19
NPIPB4-221ENST00000545367 EFCAB6Q5THR3 1501 aa13.87□□□□□ -0.19
NPIPB4-221ENST00000545367 MYO5BQ9ULV0 1848 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms