RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 WASHC2AQ641Q2 1341 aa23.29■■□□□ 1.32
CHFR-224ENST00000545046 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
CHFR-224ENST00000545046 DEPDC5O75140 1603 aa23.27■■□□□ 1.32
CHFR-224ENST00000545046 PLA2R1Q13018 1463 aa23.27■■□□□ 1.32
CHFR-224ENST00000545046 POLR1AO95602 1720 aaPredicted RBP23.27■■□□□ 1.32
CHFR-224ENST00000545046 ZNF518AQ6AHZ1 1483 aa23.26■■□□□ 1.31
CHFR-224ENST00000545046 DCAF11Q8TEB1 546 aa23.26■■□□□ 1.31
CHFR-224ENST00000545046 ATP10AO60312 1499 aa23.25■■□□□ 1.31
CHFR-224ENST00000545046 KDM2AQ9Y2K7 1162 aa23.25■■□□□ 1.31
CHFR-224ENST00000545046 EIF2AK4Q9P2K8 1649 aaKnown RBP23.25■■□□□ 1.31
CHFR-224ENST00000545046 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
CHFR-224ENST00000545046 KIDINS220Q9ULH0 1771 aa23.24■■□□□ 1.31
CHFR-224ENST00000545046 DHX29Q7Z478 1369 aaKnown RBP23.23■■□□□ 1.31
CHFR-224ENST00000545046 KANK1Q14678 1352 aa23.23■■□□□ 1.31
CHFR-224ENST00000545046 CCDC7Q96M83 1385 aa23.22■■□□□ 1.31
CHFR-224ENST00000545046 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
CHFR-224ENST00000545046 E9PCH4 1651 aa23.21■■□□□ 1.31
CHFR-224ENST00000545046 USP47Q96K76 1375 aa23.2■■□□□ 1.3
CHFR-224ENST00000545046 CYB5RLQ6IPT4 315 aa23.2■■□□□ 1.3
CHFR-224ENST00000545046 KDM5CP41229 1560 aa23.2■■□□□ 1.3
CHFR-224ENST00000545046 RIMBP3CA6NJZ7 1639 aa23.2■■□□□ 1.3
CHFR-224ENST00000545046 RIMBP3BA6NNM3 1639 aa23.2■■□□□ 1.3
CHFR-224ENST00000545046 RIMBP3Q9UFD9 1639 aa23.2■■□□□ 1.3
CHFR-224ENST00000545046 KIF3BO15066 747 aa23.19■■□□□ 1.3
CHFR-224ENST00000545046 TET3O43151 1660 aa23.19■■□□□ 1.3
CHFR-224ENST00000545046 C11orf95C9JLR9 678 aaPredicted RBP23.18■■□□□ 1.3
CHFR-224ENST00000545046 RGL3Q3MIN7 710 aa23.17■■□□□ 1.3
CHFR-224ENST00000545046 POGZQ7Z3K3 1410 aa23.17■■□□□ 1.3
CHFR-224ENST00000545046 NEO1Q92859 1461 aa23.17■■□□□ 1.3
CHFR-224ENST00000545046 CARD11Q9BXL7 1154 aa23.17■■□□□ 1.3
CHFR-224ENST00000545046 CNTLNQ9NXG0 1405 aa23.16■■□□□ 1.3
CHFR-224ENST00000545046 VWDEQ8N2E2 1590 aa23.16■■□□□ 1.3
CHFR-224ENST00000545046 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
CHFR-224ENST00000545046 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.3
CHFR-224ENST00000545046 PRDM15P57071 1507 aaPredicted RBP23.14■■□□□ 1.3
CHFR-224ENST00000545046 KIF7Q2M1P5 1343 aa23.13■■□□□ 1.29
CHFR-224ENST00000545046 A2MP01023 1474 aa23.13■■□□□ 1.29
CHFR-224ENST00000545046 MLH3Q9UHC1 1453 aa23.13■■□□□ 1.29
CHFR-224ENST00000545046 HECW2Q9P2P5 1572 aa23.13■■□□□ 1.29
CHFR-224ENST00000545046 TRPM1Q7Z4N2 1603 aa23.13■■□□□ 1.29
CHFR-224ENST00000545046 PRAG1Q86YV5 1406 aa23.13■■□□□ 1.29
CHFR-224ENST00000545046 TRPM2O94759 1503 aa23.12■■□□□ 1.29
CHFR-224ENST00000545046 MAP3K4Q9Y6R4 1608 aa23.11■■□□□ 1.29
CHFR-224ENST00000545046 MROH1Q8NDA8 1641 aa23.11■■□□□ 1.29
CHFR-224ENST00000545046 ROCK2O75116 1388 aaKnown RBP23.11■■□□□ 1.29
CHFR-224ENST00000545046 BCORL1Q5H9F3 1711 aa23.1■■□□□ 1.29
CHFR-224ENST00000545046 PTPRTO14522 1441 aa23.1■■□□□ 1.29
CHFR-224ENST00000545046 CEP152O94986 1710 aa23.09■■□□□ 1.29
CHFR-224ENST00000545046 ARID4BQ4LE39 1312 aaPredicted RBP23.09■■□□□ 1.29
CHFR-224ENST00000545046 GLI2P10070 1586 aa23.08■■□□□ 1.29
CHFR-224ENST00000545046 RNF17Q9BXT8 1623 aaKnown RBP23.07■■□□□ 1.28
CHFR-224ENST00000545046 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
CHFR-224ENST00000545046 LAMC1P11047 1609 aa23.03■■□□□ 1.28
CHFR-224ENST00000545046 ABCA6Q8N139 1617 aa23.03■■□□□ 1.28
CHFR-224ENST00000545046 LMTK2Q8IWU2 1503 aa23.02■■□□□ 1.28
CHFR-224ENST00000545046 EFCAB6Q5THR3 1501 aa23.02■■□□□ 1.27
CHFR-224ENST00000545046 ST20-MTHFSA0A0A6YYL1 179 aa23.01■■□□□ 1.27
CHFR-224ENST00000545046 RAPGEF3O95398 923 aa23.01■■□□□ 1.27
CHFR-224ENST00000545046 FRMPD1Q5SYB0 1578 aa23.01■■□□□ 1.27
CHFR-224ENST00000545046 RICTORQ6R327 1708 aa23.01■■□□□ 1.27
CHFR-224ENST00000545046 GPRASP1Q5JY77 1395 aa23■■□□□ 1.27
CHFR-224ENST00000545046 STAC3Q96MF2 364 aa23■■□□□ 1.27
CHFR-224ENST00000545046 POLR3GLQ9BT43 218 aa22.99■■□□□ 1.27
CHFR-224ENST00000545046 PPRC1Q5VV67 1664 aaKnown RBP22.98■■□□□ 1.27
CHFR-224ENST00000545046 NBPF1Q3BBV0 1214 aa22.98■■□□□ 1.27
CHFR-224ENST00000545046 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
CHFR-224ENST00000545046 KIF1BO60333 1816 aa22.97■■□□□ 1.27
CHFR-224ENST00000545046 NEURL4Q96JN8 1562 aa22.96■■□□□ 1.27
CHFR-224ENST00000545046 DIP2BQ9P265 1576 aa22.96■■□□□ 1.27
CHFR-224ENST00000545046 GGT6Q6P531 493 aa22.96■■□□□ 1.27
CHFR-224ENST00000545046 PRKRIP1Q9H875 184 aaPredicted RBP22.96■■□□□ 1.27
CHFR-224ENST00000545046 DIP2CQ9Y2E4 1556 aa22.95■■□□□ 1.26
CHFR-224ENST00000545046 MADDQ8WXG6 1647 aa22.94■■□□□ 1.26
CHFR-224ENST00000545046 TSPOAP1O95153 1857 aa22.9■■□□□ 1.26
CHFR-224ENST00000545046 WASHC2CQ9Y4E1 1318 aa22.9■■□□□ 1.26
CHFR-224ENST00000545046 CFAP65Q6ZU64 1925 aaKnown RBP22.89■■□□□ 1.26
CHFR-224ENST00000545046 UGGT1Q9NYU2 1555 aa22.88■■□□□ 1.25
CHFR-224ENST00000545046 ABCC3O15438 1527 aa22.87■■□□□ 1.25
CHFR-224ENST00000545046 NPATQ14207 1427 aa22.85■■□□□ 1.25
CHFR-224ENST00000545046 CAMSAP1Q5T5Y3 1602 aa22.85■■□□□ 1.25
CHFR-224ENST00000545046 KIAA1210Q9ULL0 1709 aa22.84■■□□□ 1.25
CHFR-224ENST00000545046 YEATS2Q9ULM3 1422 aa22.84■■□□□ 1.25
CHFR-224ENST00000545046 ZMYM4Q5VZL5 1548 aa22.83■■□□□ 1.25
CHFR-224ENST00000545046 IFT172Q9UG01 1749 aa22.83■■□□□ 1.24
CHFR-224ENST00000545046 MROH2AA6NES4 1674 aa22.82■■□□□ 1.24
CHFR-224ENST00000545046 IQGAP1P46940 1657 aa22.82■■□□□ 1.24
CHFR-224ENST00000545046 ZC3H13Q5T200 1668 aaKnown RBP22.82■■□□□ 1.24
CHFR-224ENST00000545046 MYOM2P54296 1465 aa22.81■■□□□ 1.24
CHFR-224ENST00000545046 TESK2Q96S53 571 aa22.8■■□□□ 1.24
CHFR-224ENST00000545046 COL17A1Q9UMD9 1497 aaPredicted RBP22.8■■□□□ 1.24
CHFR-224ENST00000545046 MRS2Q9HD23 443 aa22.8■■□□□ 1.24
CHFR-224ENST00000545046 TMF1P82094 1093 aa22.79■■□□□ 1.24
CHFR-224ENST00000545046 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
CHFR-224ENST00000545046 CCDC184Q52MB2 194 aa22.78■■□□□ 1.24
CHFR-224ENST00000545046 CHGAP10645 457 aaKnown RBP22.77■■□□□ 1.24
CHFR-224ENST00000545046 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
CHFR-224ENST00000545046 DISP3Q9P2K9 1392 aa22.75■■□□□ 1.23
CHFR-224ENST00000545046 ARHGAP31Q2M1Z3 1444 aa22.75■■□□□ 1.23
CHFR-224ENST00000545046 SIGLEC1Q9BZZ2 1709 aa22.75■■□□□ 1.23
CHFR-224ENST00000545046 KIF13AQ9H1H9 1805 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms