RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 BCORL1Q5H9F3 1711 aa11.53□□□□□ -0.56
CPSF7-224ENST00000544990 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
CPSF7-224ENST00000544990 SYCP2Q9BX26 1530 aa11.52□□□□□ -0.57
CPSF7-224ENST00000544990 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
CPSF7-224ENST00000544990 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-224ENST00000544990 ADAMTSL3P82987 1691 aa11.51□□□□□ -0.57
CPSF7-224ENST00000544990 SPAG9O60271 1321 aaKnown RBP11.5□□□□□ -0.57
CPSF7-224ENST00000544990 RSPH4AQ5TD94 716 aa11.49□□□□□ -0.57
CPSF7-224ENST00000544990 ZNF644Q9H582 1327 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-224ENST00000544990 DIP2CQ9Y2E4 1556 aa11.49□□□□□ -0.57
CPSF7-224ENST00000544990 KIDINS220Q9ULH0 1771 aa11.49□□□□□ -0.57
CPSF7-224ENST00000544990 MLECQ14165 292 aa11.48□□□□□ -0.57
CPSF7-224ENST00000544990 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
CPSF7-224ENST00000544990 SIGLEC1Q9BZZ2 1709 aa11.47□□□□□ -0.57
CPSF7-224ENST00000544990 ABCA6Q8N139 1617 aa11.47□□□□□ -0.57
CPSF7-224ENST00000544990 MADDQ8WXG6 1647 aa11.47□□□□□ -0.57
CPSF7-224ENST00000544990 REREQ9P2R6 1566 aa11.47□□□□□ -0.57
CPSF7-224ENST00000544990 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-224ENST00000544990 CAMSAP2Q08AD1 1489 aa11.46□□□□□ -0.57
CPSF7-224ENST00000544990 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-224ENST00000544990 ATP7AQ04656 1500 aa11.45□□□□□ -0.58
CPSF7-224ENST00000544990 PTPRMP28827 1452 aa11.45□□□□□ -0.58
CPSF7-224ENST00000544990 MBD5Q9P267 1494 aa11.45□□□□□ -0.58
CPSF7-224ENST00000544990 MYOM3Q5VTT5 1437 aa11.45□□□□□ -0.58
CPSF7-224ENST00000544990 MIA2Q96PC5 1412 aa11.45□□□□□ -0.58
CPSF7-224ENST00000544990 RIMS1Q86UR5 1692 aaKnown RBP11.45□□□□□ -0.58
CPSF7-224ENST00000544990 FER1L4A9Z1Z3 1794 aa11.44□□□□□ -0.58
CPSF7-224ENST00000544990 TSPY4P0CV99 314 aa11.44□□□□□ -0.58
CPSF7-224ENST00000544990 TSPY10P0CW01 314 aa11.44□□□□□ -0.58
CPSF7-224ENST00000544990 INO80Q9ULG1 1556 aaPredicted RBP11.44□□□□□ -0.58
CPSF7-224ENST00000544990 AGLP35573 1532 aa11.44□□□□□ -0.58
CPSF7-224ENST00000544990 CCDC141Q6ZP82 1450 aa11.44□□□□□ -0.58
CPSF7-224ENST00000544990 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
CPSF7-224ENST00000544990 PKD2Q13563 968 aa11.43□□□□□ -0.58
CPSF7-224ENST00000544990 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
CPSF7-224ENST00000544990 ARHGEF5Q12774 1597 aa11.42□□□□□ -0.58
CPSF7-224ENST00000544990 ADGBQ8N7X0 1667 aa11.42□□□□□ -0.58
CPSF7-224ENST00000544990 A2MP01023 1474 aa11.41□□□□□ -0.58
CPSF7-224ENST00000544990 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-224ENST00000544990 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.58
CPSF7-224ENST00000544990 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
CPSF7-224ENST00000544990 DHX29Q7Z478 1369 aaKnown RBP11.38□□□□□ -0.59
CPSF7-224ENST00000544990 PLXNC1O60486 1568 aa11.37□□□□□ -0.59
CPSF7-224ENST00000544990 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
CPSF7-224ENST00000544990 CNTLNQ9NXG0 1405 aa11.36□□□□□ -0.59
CPSF7-224ENST00000544990 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
CPSF7-224ENST00000544990 GGT6Q6P531 493 aa11.36□□□□□ -0.59
CPSF7-224ENST00000544990 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
CPSF7-224ENST00000544990 MAST1Q9Y2H9 1570 aa11.36□□□□□ -0.59
CPSF7-224ENST00000544990 SETD1BQ9UPS6 1966 aaKnown RBP11.35□□□□□ -0.59
CPSF7-224ENST00000544990 TCOF1Q13428 1488 aaKnown RBP11.34□□□□□ -0.59
CPSF7-224ENST00000544990 KIF3BO15066 747 aa11.34□□□□□ -0.59
CPSF7-224ENST00000544990 CEBPAP49715 358 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-224ENST00000544990 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-224ENST00000544990 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
CPSF7-224ENST00000544990 C3P01024 1663 aa11.33□□□□□ -0.6
CPSF7-224ENST00000544990 DNMT1P26358 1616 aaKnown RBP11.32□□□□□ -0.6
CPSF7-224ENST00000544990 FAM50AQ14320 339 aaKnown RBP11.32□□□□□ -0.6
CPSF7-224ENST00000544990 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
CPSF7-224ENST00000544990 ABCC5O15440 1437 aa11.32□□□□□ -0.6
CPSF7-224ENST00000544990 DAPK1P53355 1430 aa11.32□□□□□ -0.6
CPSF7-224ENST00000544990 SHANK2Q9UPX8 1470 aa11.32□□□□□ -0.6
CPSF7-224ENST00000544990 ZMYM3Q14202 1370 aa11.31□□□□□ -0.6
CPSF7-224ENST00000544990 CLTCQ00610 1675 aaKnown RBP11.31□□□□□ -0.6
CPSF7-224ENST00000544990 PREX1Q8TCU6 1659 aa11.3□□□□□ -0.6
CPSF7-224ENST00000544990 LMTK3Q96Q04 1460 aa11.3□□□□□ -0.6
CPSF7-224ENST00000544990 DUOX2Q9NRD8 1548 aa11.3□□□□□ -0.6
CPSF7-224ENST00000544990 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
CPSF7-224ENST00000544990 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
CPSF7-224ENST00000544990 EIF2AK4Q9P2K8 1649 aaKnown RBP11.28□□□□□ -0.6
CPSF7-224ENST00000544990 UHRF1BP1Q6BDS2 1440 aa11.28□□□□□ -0.6
CPSF7-224ENST00000544990 RRP7BPQ9NSQ0 103 aa11.28□□□□□ -0.6
CPSF7-224ENST00000544990 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
CPSF7-224ENST00000544990 FAM135AQ9P2D6 1515 aa11.28□□□□□ -0.6
CPSF7-224ENST00000544990 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
CPSF7-224ENST00000544990 KIF15Q9NS87 1388 aa11.28□□□□□ -0.6
CPSF7-224ENST00000544990 NPATQ14207 1427 aa11.27□□□□□ -0.6
CPSF7-224ENST00000544990 KDM5DQ9BY66 1539 aa11.26□□□□□ -0.61
CPSF7-224ENST00000544990 HSPA2P54652 639 aa11.26□□□□□ -0.61
CPSF7-224ENST00000544990 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
CPSF7-224ENST00000544990 GSE1Q14687 1217 aa11.26□□□□□ -0.61
CPSF7-224ENST00000544990 ERBINQ96RT1 1412 aa11.26□□□□□ -0.61
CPSF7-224ENST00000544990 RNF17Q9BXT8 1623 aaKnown RBP11.25□□□□□ -0.61
CPSF7-224ENST00000544990 NCOA1Q15788 1441 aa11.25□□□□□ -0.61
CPSF7-224ENST00000544990 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
CPSF7-224ENST00000544990 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-224ENST00000544990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.23□□□□□ -0.61
CPSF7-224ENST00000544990 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
CPSF7-224ENST00000544990 ADGRL2O95490 1459 aa11.23□□□□□ -0.61
CPSF7-224ENST00000544990 KANK1Q14678 1352 aa11.22□□□□□ -0.61
CPSF7-224ENST00000544990 PZPP20742 1482 aa11.21□□□□□ -0.61
CPSF7-224ENST00000544990 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
CPSF7-224ENST00000544990 FBXO41Q8TF61 875 aa11.21□□□□□ -0.61
CPSF7-224ENST00000544990 ITGAEP38570 1179 aa11.2□□□□□ -0.62
CPSF7-224ENST00000544990 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
CPSF7-224ENST00000544990 CEP152O94986 1710 aa11.2□□□□□ -0.62
CPSF7-224ENST00000544990 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
CPSF7-224ENST00000544990 ABCC3O15438 1527 aa11.19□□□□□ -0.62
CPSF7-224ENST00000544990 ANKRD50Q9ULJ7 1429 aa11.19□□□□□ -0.62
CPSF7-224ENST00000544990 RGL2O15211 777 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 658.4 ms