RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 NPHP4O75161 1426 aaPredicted RBP14.73□□□□□ -0.05
CIT-216ENST00000544872 FAM135BQ49AJ0 1406 aa14.73□□□□□ -0.05
CIT-216ENST00000544872 KDM5CP41229 1560 aa14.73□□□□□ -0.05
CIT-216ENST00000544872 DNMT1P26358 1616 aaKnown RBP14.72□□□□□ -0.05
CIT-216ENST00000544872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.7□□□□□ -0.06
CIT-216ENST00000544872 SYNMO15061 1565 aa14.69□□□□□ -0.06
CIT-216ENST00000544872 CFDP1Q9UEE9 299 aaPredicted RBP14.69□□□□□ -0.06
CIT-216ENST00000544872 CCNB3Q8WWL7 1395 aa14.69□□□□□ -0.06
CIT-216ENST00000544872 JCADQ9P266 1359 aa14.69□□□□□ -0.06
CIT-216ENST00000544872 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
CIT-216ENST00000544872 CLTCQ00610 1675 aaKnown RBP14.68□□□□□ -0.06
CIT-216ENST00000544872 GGT6Q6P531 493 aa14.66□□□□□ -0.06
CIT-216ENST00000544872 THEMISQ8N1K5 641 aaPredicted RBP14.66□□□□□ -0.06
CIT-216ENST00000544872 ZNF777Q9ULD5 760 aaPredicted RBP14.66□□□□□ -0.06
CIT-216ENST00000544872 CDK12Q9NYV4 1490 aaPredicted RBP14.65□□□□□ -0.06
CIT-216ENST00000544872 ARHGAP5Q13017 1502 aa14.65□□□□□ -0.06
CIT-216ENST00000544872 KIF14Q15058 1648 aa14.64□□□□□ -0.07
CIT-216ENST00000544872 STRCP1A6NGW2 1772 aa14.64□□□□□ -0.07
CIT-216ENST00000544872 MAP3K1Q13233 1512 aa14.63□□□□□ -0.07
CIT-216ENST00000544872 MYO5CQ9NQX4 1742 aa14.63□□□□□ -0.07
CIT-216ENST00000544872 YY1P25490 414 aa14.62□□□□□ -0.07
CIT-216ENST00000544872 MED14O60244 1454 aa14.61□□□□□ -0.07
CIT-216ENST00000544872 ROBO1Q9Y6N7 1651 aa14.61□□□□□ -0.07
CIT-216ENST00000544872 ABCC1P33527 1531 aa14.61□□□□□ -0.07
CIT-216ENST00000544872 TNRQ92752 1358 aa14.6□□□□□ -0.07
CIT-216ENST00000544872 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
CIT-216ENST00000544872 IQGAP1P46940 1657 aa14.6□□□□□ -0.07
CIT-216ENST00000544872 EHBP1L1Q8N3D4 1523 aa14.6□□□□□ -0.07
CIT-216ENST00000544872 SPATA31A6Q5VVP1 1343 aa14.6□□□□□ -0.07
CIT-216ENST00000544872 LRRC9Q6ZRR7 1453 aa14.59□□□□□ -0.07
CIT-216ENST00000544872 RSPH4AQ5TD94 716 aa14.59□□□□□ -0.07
CIT-216ENST00000544872 ATAD2Q6PL18 1390 aa14.59□□□□□ -0.07
CIT-216ENST00000544872 LRP6O75581 1613 aa14.58□□□□□ -0.08
CIT-216ENST00000544872 ITSN2Q9NZM3 1697 aa14.58□□□□□ -0.08
CIT-216ENST00000544872 FAM135AQ9P2D6 1515 aa14.57□□□□□ -0.08
CIT-216ENST00000544872 TIAM1Q13009 1591 aa14.57□□□□□ -0.08
CIT-216ENST00000544872 RGS12O14924 1447 aa14.57□□□□□ -0.08
CIT-216ENST00000544872 PHLPP1O60346 1717 aa14.56□□□□□ -0.08
CIT-216ENST00000544872 FBXO31Q5XUX0 539 aaPredicted RBP14.56□□□□□ -0.08
CIT-216ENST00000544872 DEPDC5O75140 1603 aa14.55□□□□□ -0.08
CIT-216ENST00000544872 TSPY4P0CV99 314 aa14.55□□□□□ -0.08
CIT-216ENST00000544872 TSPY10P0CW01 314 aa14.55□□□□□ -0.08
CIT-216ENST00000544872 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
CIT-216ENST00000544872 KIDINS220Q9ULH0 1771 aa14.53□□□□□ -0.08
CIT-216ENST00000544872 GPATCH8Q9UKJ3 1502 aaKnown RBP14.53□□□□□ -0.08
CIT-216ENST00000544872 NCOA2Q15596 1464 aa14.53□□□□□ -0.08
CIT-216ENST00000544872 AFF2P51816 1311 aa14.53□□□□□ -0.08
CIT-216ENST00000544872 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
CIT-216ENST00000544872 UGGT1Q9NYU2 1555 aa14.52□□□□□ -0.08
CIT-216ENST00000544872 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
CIT-216ENST00000544872 HNRNPMP52272 730 aaKnown RBP eCLIP14.52□□□□□ -0.09
CIT-216ENST00000544872 QTRT2Q9H974 415 aaKnown RBP14.51□□□□□ -0.09
CIT-216ENST00000544872 TMEM94Q12767 1356 aa14.5□□□□□ -0.09
CIT-216ENST00000544872 KDM5DQ9BY66 1539 aa14.5□□□□□ -0.09
CIT-216ENST00000544872 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
CIT-216ENST00000544872 SPAG9O60271 1321 aaKnown RBP14.49□□□□□ -0.09
CIT-216ENST00000544872 MIA2Q96PC5 1412 aa14.49□□□□□ -0.09
CIT-216ENST00000544872 XIRP1Q702N8 1843 aaKnown RBP14.48□□□□□ -0.09
CIT-216ENST00000544872 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
CIT-216ENST00000544872 NGLY1Q96IV0 654 aa14.48□□□□□ -0.09
CIT-216ENST00000544872 FAM50AQ14320 339 aaKnown RBP14.47□□□□□ -0.09
CIT-216ENST00000544872 SLAIN2Q9P270 581 aa14.47□□□□□ -0.09
CIT-216ENST00000544872 MYOM3Q5VTT5 1437 aa14.47□□□□□ -0.09
CIT-216ENST00000544872 FGD6Q6ZV73 1430 aa14.47□□□□□ -0.09
CIT-216ENST00000544872 LRP5O75197 1615 aa14.46□□□□□ -0.09
CIT-216ENST00000544872 PROSER2Q86WR7 435 aaPredicted RBP14.46□□□□□ -0.09
CIT-216ENST00000544872 CCDC125Q86Z20 511 aa14.46□□□□□ -0.09
CIT-216ENST00000544872 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
CIT-216ENST00000544872 NLRP1Q9C000 1473 aa14.45□□□□□ -0.1
CIT-216ENST00000544872 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
CIT-216ENST00000544872 A2MP01023 1474 aa14.44□□□□□ -0.1
CIT-216ENST00000544872 C8orf37Q96NL8 207 aa14.43□□□□□ -0.1
CIT-216ENST00000544872 MSH6P52701 1360 aa14.43□□□□□ -0.1
CIT-216ENST00000544872 ATP7AQ04656 1500 aa14.41□□□□□ -0.1
CIT-216ENST00000544872 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
CIT-216ENST00000544872 PREX2Q70Z35 1606 aa14.41□□□□□ -0.1
CIT-216ENST00000544872 SAMD9LQ8IVG5 1584 aa14.4□□□□□ -0.1
CIT-216ENST00000544872 PZPP20742 1482 aa14.39□□□□□ -0.11
CIT-216ENST00000544872 TXNDC2Q86VQ3 553 aa14.38□□□□□ -0.11
CIT-216ENST00000544872 ZC3H13Q5T200 1668 aaKnown RBP14.38□□□□□ -0.11
CIT-216ENST00000544872 PSDA5PKW4 1024 aaPredicted RBP14.37□□□□□ -0.11
CIT-216ENST00000544872 PLXNC1O60486 1568 aa14.37□□□□□ -0.11
CIT-216ENST00000544872 CDC42BPBQ9Y5S2 1711 aa14.37□□□□□ -0.11
CIT-216ENST00000544872 WASHC2CQ9Y4E1 1318 aa14.37□□□□□ -0.11
CIT-216ENST00000544872 CAMSAP2Q08AD1 1489 aa14.37□□□□□ -0.11
CIT-216ENST00000544872 SCAF11Q99590 1463 aaKnown RBP14.37□□□□□ -0.11
CIT-216ENST00000544872 CCDC141Q6ZP82 1450 aa14.36□□□□□ -0.11
CIT-216ENST00000544872 RTEL1-TNFRSF6BF6WH68 1400 aa14.35□□□□□ -0.11
CIT-216ENST00000544872 KCNA6P17658 529 aa14.35□□□□□ -0.11
CIT-216ENST00000544872 EID1Q9Y6B2 187 aa14.35□□□□□ -0.11
CIT-216ENST00000544872 SYCP2Q9BX26 1530 aa14.35□□□□□ -0.11
CIT-216ENST00000544872 SHPRHQ149N8 1683 aa14.34□□□□□ -0.11
CIT-216ENST00000544872 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
CIT-216ENST00000544872 HRCP23327 699 aa14.34□□□□□ -0.11
CIT-216ENST00000544872 ITGAEP38570 1179 aa14.34□□□□□ -0.11
CIT-216ENST00000544872 SF3B2Q13435 895 aaKnown RBP14.34□□□□□ -0.11
CIT-216ENST00000544872 MBD5Q9P267 1494 aa14.33□□□□□ -0.12
CIT-216ENST00000544872 CDC42BPAQ5VT25 1732 aa14.33□□□□□ -0.12
CIT-216ENST00000544872 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.12
CIT-216ENST00000544872 LTKP29376 864 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms