RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 RAPGEF6Q8TEU7 1601 aa12.18□□□□□ -0.46
CIT-215ENST00000544800 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
CIT-215ENST00000544800 ATAD2Q6PL18 1390 aa12.16□□□□□ -0.46
CIT-215ENST00000544800 ABCA6Q8N139 1617 aa12.15□□□□□ -0.46
CIT-215ENST00000544800 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
CIT-215ENST00000544800 STRCP1A6NGW2 1772 aa12.14□□□□□ -0.47
CIT-215ENST00000544800 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
CIT-215ENST00000544800 LRP6O75581 1613 aa12.13□□□□□ -0.47
CIT-215ENST00000544800 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
CIT-215ENST00000544800 RGS12O14924 1447 aa12.12□□□□□ -0.47
CIT-215ENST00000544800 SENP3-EIF4A1A0A087X0R7 540 aa12.12□□□□□ -0.47
CIT-215ENST00000544800 LRP5O75197 1615 aa12.11□□□□□ -0.47
CIT-215ENST00000544800 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
CIT-215ENST00000544800 ROBO1Q9Y6N7 1651 aa12.1□□□□□ -0.47
CIT-215ENST00000544800 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
CIT-215ENST00000544800 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
CIT-215ENST00000544800 ABCC1P33527 1531 aa12.09□□□□□ -0.47
CIT-215ENST00000544800 KDM5DQ9BY66 1539 aa12.09□□□□□ -0.47
CIT-215ENST00000544800 AFF2P51816 1311 aa12.09□□□□□ -0.47
CIT-215ENST00000544800 TNRQ92752 1358 aa12.08□□□□□ -0.48
CIT-215ENST00000544800 GGT6Q6P531 493 aa12.08□□□□□ -0.48
CIT-215ENST00000544800 FGD6Q6ZV73 1430 aa12.08□□□□□ -0.48
CIT-215ENST00000544800 CLTCQ00610 1675 aaKnown RBP12.07□□□□□ -0.48
CIT-215ENST00000544800 NGLY1Q96IV0 654 aa12.07□□□□□ -0.48
CIT-215ENST00000544800 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
CIT-215ENST00000544800 LRRC9Q6ZRR7 1453 aa12.06□□□□□ -0.48
CIT-215ENST00000544800 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
CIT-215ENST00000544800 SLAIN2Q9P270 581 aa12.05□□□□□ -0.48
CIT-215ENST00000544800 FAM135AQ9P2D6 1515 aa12.05□□□□□ -0.48
CIT-215ENST00000544800 PHLPP1O60346 1717 aa12.04□□□□□ -0.48
CIT-215ENST00000544800 FBXO31Q5XUX0 539 aaPredicted RBP12.04□□□□□ -0.48
CIT-215ENST00000544800 TMEM94Q12767 1356 aa12.03□□□□□ -0.48
CIT-215ENST00000544800 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
CIT-215ENST00000544800 UGGT1Q9NYU2 1555 aa12.01□□□□□ -0.49
CIT-215ENST00000544800 XIRP1Q702N8 1843 aaKnown RBP12.01□□□□□ -0.49
CIT-215ENST00000544800 HRCP23327 699 aa12□□□□□ -0.49
CIT-215ENST00000544800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.49
CIT-215ENST00000544800 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
CIT-215ENST00000544800 KIDINS220Q9ULH0 1771 aa12□□□□□ -0.49
CIT-215ENST00000544800 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
CIT-215ENST00000544800 NLRP1Q9C000 1473 aa11.99□□□□□ -0.49
CIT-215ENST00000544800 ITSN2Q9NZM3 1697 aa11.99□□□□□ -0.49
CIT-215ENST00000544800 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
CIT-215ENST00000544800 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
CIT-215ENST00000544800 ATP7AQ04656 1500 aa11.97□□□□□ -0.49
CIT-215ENST00000544800 C1QTNF8P60827 252 aa11.97□□□□□ -0.49
CIT-215ENST00000544800 EP400Q96L91 3159 aa11.97□□□□□ -0.49
CIT-215ENST00000544800 SAMD9Q5K651 1589 aa11.96□□□□□ -0.49
CIT-215ENST00000544800 NHSL1Q5SYE7 1610 aa11.96□□□□□ -0.5
CIT-215ENST00000544800 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
CIT-215ENST00000544800 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
CIT-215ENST00000544800 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
CIT-215ENST00000544800 NWD1Q149M9 1564 aa11.94□□□□□ -0.5
CIT-215ENST00000544800 KCNA6P17658 529 aa11.94□□□□□ -0.5
CIT-215ENST00000544800 C8orf37Q96NL8 207 aa11.94□□□□□ -0.5
CIT-215ENST00000544800 MSH6P52701 1360 aa11.93□□□□□ -0.5
CIT-215ENST00000544800 ZC3H13Q5T200 1668 aaKnown RBP11.92□□□□□ -0.5
CIT-215ENST00000544800 A2MP01023 1474 aa11.92□□□□□ -0.5
CIT-215ENST00000544800 PZPP20742 1482 aa11.92□□□□□ -0.5
CIT-215ENST00000544800 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
CIT-215ENST00000544800 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
CIT-215ENST00000544800 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
CIT-215ENST00000544800 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
CIT-215ENST00000544800 BLMP54132 1417 aaPredicted RBP11.91□□□□□ -0.5
CIT-215ENST00000544800 MAP3K1Q13233 1512 aa11.91□□□□□ -0.5
CIT-215ENST00000544800 TXNDC2Q86VQ3 553 aa11.9□□□□□ -0.5
CIT-215ENST00000544800 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
CIT-215ENST00000544800 LTKP29376 864 aa11.89□□□□□ -0.51
CIT-215ENST00000544800 SF3B2Q13435 895 aaKnown RBP11.89□□□□□ -0.51
CIT-215ENST00000544800 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
CIT-215ENST00000544800 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
CIT-215ENST00000544800 CEP350Q5VT06 3117 aa11.89□□□□□ -0.51
CIT-215ENST00000544800 TRPC5Q9UL62 973 aaPredicted RBP11.88□□□□□ -0.51
CIT-215ENST00000544800 KIF14Q15058 1648 aa11.87□□□□□ -0.51
CIT-215ENST00000544800 SLC34A2O95436 690 aa11.87□□□□□ -0.51
CIT-215ENST00000544800 SAMD9LQ8IVG5 1584 aa11.87□□□□□ -0.51
CIT-215ENST00000544800 ABCC3O15438 1527 aa11.86□□□□□ -0.51
CIT-215ENST00000544800 KCNA4P22459 653 aa11.86□□□□□ -0.51
CIT-215ENST00000544800 EID1Q9Y6B2 187 aa11.86□□□□□ -0.51
CIT-215ENST00000544800 PRDM15P57071 1507 aaPredicted RBP11.86□□□□□ -0.51
CIT-215ENST00000544800 WASHC2CQ9Y4E1 1318 aa11.86□□□□□ -0.51
CIT-215ENST00000544800 BCL9LQ86UU0 1499 aa11.85□□□□□ -0.51
CIT-215ENST00000544800 USP21Q9UK80 565 aa11.84□□□□□ -0.51
CIT-215ENST00000544800 AHDC1Q5TGY3 1603 aaPredicted RBP11.84□□□□□ -0.51
CIT-215ENST00000544800 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
CIT-215ENST00000544800 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
CIT-215ENST00000544800 CLIP1P30622 1438 aa11.82□□□□□ -0.52
CIT-215ENST00000544800 TROQ12816 1431 aaPredicted RBP11.82□□□□□ -0.52
CIT-215ENST00000544800 TIAM1Q13009 1591 aa11.82□□□□□ -0.52
CIT-215ENST00000544800 CDC42BPBQ9Y5S2 1711 aa11.82□□□□□ -0.52
CIT-215ENST00000544800 HNRNPMP52272 730 aaKnown RBP eCLIP11.81□□□□□ -0.52
CIT-215ENST00000544800 LRRC59Q96AG4 307 aaKnown RBP11.81□□□□□ -0.52
CIT-215ENST00000544800 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
CIT-215ENST00000544800 DIP2AQ14689 1571 aa11.79□□□□□ -0.52
CIT-215ENST00000544800 NKTRP30414 1462 aaKnown RBP11.79□□□□□ -0.52
CIT-215ENST00000544800 ARHGAP23Q9P227 1491 aa11.79□□□□□ -0.52
CIT-215ENST00000544800 EHMT2Q96KQ7 1210 aa11.79□□□□□ -0.52
CIT-215ENST00000544800 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
CIT-215ENST00000544800 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
CIT-215ENST00000544800 KIF3BO15066 747 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms