RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 MAP3K9P80192 1104 aa9.87□□□□□ -0.83
RAP1B-231ENST00000544639 SLC4A5Q9BY07 1137 aa9.87□□□□□ -0.83
RAP1B-231ENST00000544639 HCSTQ9UBK5 93 aa9.87□□□□□ -0.83
RAP1B-231ENST00000544639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
RAP1B-231ENST00000544639 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
RAP1B-231ENST00000544639 PTPREP23469 700 aa9.84□□□□□ -0.83
RAP1B-231ENST00000544639 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
RAP1B-231ENST00000544639 VPS9D1Q9Y2B5 631 aa9.84□□□□□ -0.83
RAP1B-231ENST00000544639 MLLT3P42568 568 aaPredicted RBP9.83□□□□□ -0.84
RAP1B-231ENST00000544639 LMOD2Q6P5Q4 547 aa9.83□□□□□ -0.84
RAP1B-231ENST00000544639 ZDHHC16Q969W1 377 aa9.83□□□□□ -0.84
RAP1B-231ENST00000544639 STAC3Q96MF2 364 aa9.83□□□□□ -0.84
RAP1B-231ENST00000544639 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
RAP1B-231ENST00000544639 SMYD5Q6GMV2 418 aa9.81□□□□□ -0.84
RAP1B-231ENST00000544639 ZBED2Q9BTP6 218 aa9.78□□□□□ -0.84
RAP1B-231ENST00000544639 ADAM33Q9BZ11 813 aa9.78□□□□□ -0.84
RAP1B-231ENST00000544639 BHMG1C9JSJ3 638 aaPredicted RBP9.77□□□□□ -0.85
RAP1B-231ENST00000544639 KCTD12Q96CX2 325 aaKnown RBP9.76□□□□□ -0.85
RAP1B-231ENST00000544639 PHF14O94880 888 aa9.75□□□□□ -0.85
RAP1B-231ENST00000544639 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
RAP1B-231ENST00000544639 PLA2G2EQ9NZK7 142 aa9.75□□□□□ -0.85
RAP1B-231ENST00000544639 PCDHGA10Q9Y5H3 936 aa9.75□□□□□ -0.85
RAP1B-231ENST00000544639 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
RAP1B-231ENST00000544639 PPP1R3GB7ZBB8 358 aa9.73□□□□□ -0.85
RAP1B-231ENST00000544639 TYW1BQ6NUM6 668 aa9.73□□□□□ -0.85
RAP1B-231ENST00000544639 DDX12PQ92771 950 aa9.73□□□□□ -0.85
RAP1B-231ENST00000544639 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
RAP1B-231ENST00000544639 OSBPP22059 807 aa9.71□□□□□ -0.86
RAP1B-231ENST00000544639 EPAS1Q99814 870 aa9.71□□□□□ -0.86
RAP1B-231ENST00000544639 NBPF3Q9H094 633 aa9.71□□□□□ -0.86
RAP1B-231ENST00000544639 MRPL50Q8N5N7 158 aaKnown RBP9.7□□□□□ -0.86
RAP1B-231ENST00000544639 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
RAP1B-231ENST00000544639 GOLGA8CPA6NN73 597 aa9.68□□□□□ -0.86
RAP1B-231ENST00000544639 GPIHBP1Q8IV16 184 aa9.68□□□□□ -0.86
RAP1B-231ENST00000544639 RABGEF1Q9UJ41 708 aa9.68□□□□□ -0.86
RAP1B-231ENST00000544639 PRIM1P49642 420 aaKnown RBP9.67□□□□□ -0.86
RAP1B-231ENST00000544639 THSD4Q6ZMP0 1018 aa9.67□□□□□ -0.86
RAP1B-231ENST00000544639 WNT2BQ93097 391 aa9.66□□□□□ -0.86
RAP1B-231ENST00000544639 ONECUT3O60422 494 aaPredicted RBP9.65□□□□□ -0.86
RAP1B-231ENST00000544639 COL9A1P20849 921 aa9.65□□□□□ -0.86
RAP1B-231ENST00000544639 PTPN5P54829 565 aa9.65□□□□□ -0.86
RAP1B-231ENST00000544639 GPR37O15354 613 aa9.64□□□□□ -0.87
RAP1B-231ENST00000544639 EN1Q05925 392 aaPredicted RBP9.63□□□□□ -0.87
RAP1B-231ENST00000544639 PROX2Q3B8N5 592 aa9.63□□□□□ -0.87
RAP1B-231ENST00000544639 C6orf132Q5T0Z8 1188 aa9.63□□□□□ -0.87
RAP1B-231ENST00000544639 IFFO2Q5TF58 517 aa9.63□□□□□ -0.87
RAP1B-231ENST00000544639 LAPTM4BQ86VI4 370 aa9.63□□□□□ -0.87
RAP1B-231ENST00000544639 ZMYND10O75800 440 aa9.62□□□□□ -0.87
RAP1B-231ENST00000544639 NUTM2FA1L443 756 aa9.61□□□□□ -0.87
RAP1B-231ENST00000544639 MAP3K7O43318 606 aa9.59□□□□□ -0.87
RAP1B-231ENST00000544639 BARGINQ6ZT62 677 aa9.59□□□□□ -0.87
RAP1B-231ENST00000544639 ANKK1Q8NFD2 765 aa9.58□□□□□ -0.88
RAP1B-231ENST00000544639 RBM33Q96EV2 1170 aaKnown RBP9.58□□□□□ -0.88
RAP1B-231ENST00000544639 KIAA1468Q9P260 1216 aa9.58□□□□□ -0.88
RAP1B-231ENST00000544639 TRIM6-TRIM34B2RNG4 842 aa9.57□□□□□ -0.88
RAP1B-231ENST00000544639 CDHR5Q9HBB8 845 aa9.57□□□□□ -0.88
RAP1B-231ENST00000544639 FCHSD2O94868 740 aa9.56□□□□□ -0.88
RAP1B-231ENST00000544639 PTGDRQ13258 359 aa9.56□□□□□ -0.88
RAP1B-231ENST00000544639 TSR1Q2NL82 804 aaKnown RBP9.56□□□□□ -0.88
RAP1B-231ENST00000544639 SOWAHBA6NEL2 793 aa9.54□□□□□ -0.88
RAP1B-231ENST00000544639 HIC1Q14526 733 aa9.54□□□□□ -0.88
RAP1B-231ENST00000544639 NYAP1Q6ZVC0 841 aa9.54□□□□□ -0.88
RAP1B-231ENST00000544639 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
RAP1B-231ENST00000544639 SLC24A3Q9HC58 644 aa9.54□□□□□ -0.88
RAP1B-231ENST00000544639 NPDC1Q9NQX5 325 aaPredicted RBP9.54□□□□□ -0.88
RAP1B-231ENST00000544639 GNPATO15228 680 aa9.53□□□□□ -0.88
RAP1B-231ENST00000544639 RGS20O76081 388 aa9.53□□□□□ -0.88
RAP1B-231ENST00000544639 FAM98CQ17RN3 349 aaKnown RBP9.52□□□□□ -0.89
RAP1B-231ENST00000544639 FECHP22830 423 aa9.5□□□□□ -0.89
RAP1B-231ENST00000544639 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
RAP1B-231ENST00000544639 CERKQ8TCT0 537 aa9.5□□□□□ -0.89
RAP1B-231ENST00000544639 ITGBL1O95965 494 aaPredicted RBP9.49□□□□□ -0.89
RAP1B-231ENST00000544639 BCAMP50895 628 aa9.49□□□□□ -0.89
RAP1B-231ENST00000544639 MAP2K5Q13163 448 aa9.49□□□□□ -0.89
RAP1B-231ENST00000544639 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
RAP1B-231ENST00000544639 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
RAP1B-231ENST00000544639 A0A0G2JS52 829 aa9.48□□□□□ -0.89
RAP1B-231ENST00000544639 AK7Q96M32 723 aa9.48□□□□□ -0.89
RAP1B-231ENST00000544639 TSKSQ9UJT2 592 aa9.48□□□□□ -0.89
RAP1B-231ENST00000544639 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
RAP1B-231ENST00000544639 IRF6O14896 467 aa9.45□□□□□ -0.9
RAP1B-231ENST00000544639 PRSS12P56730 875 aa9.45□□□□□ -0.9
RAP1B-231ENST00000544639 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
RAP1B-231ENST00000544639 CDCA7LQ96GN5 454 aa9.45□□□□□ -0.9
RAP1B-231ENST00000544639 LRCH3Q96II8 777 aa9.45□□□□□ -0.9
RAP1B-231ENST00000544639 WBP1LQ9NX94 342 aa9.45□□□□□ -0.9
RAP1B-231ENST00000544639 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.45□□□□□ -0.9
RAP1B-231ENST00000544639 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
RAP1B-231ENST00000544639 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
RAP1B-231ENST00000544639 PADI6Q6TGC4 694 aa9.43□□□□□ -0.9
RAP1B-231ENST00000544639 TRIM66O15016 1216 aa9.42□□□□□ -0.9
RAP1B-231ENST00000544639 TTC13Q8NBP0 860 aa9.42□□□□□ -0.9
RAP1B-231ENST00000544639 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
RAP1B-231ENST00000544639 HPS5Q9UPZ3 1129 aa9.41□□□□□ -0.9
RAP1B-231ENST00000544639 NBPF26B4DH59 902 aa9.4□□□□□ -0.9
RAP1B-231ENST00000544639 FAM198AQ9UFP1 575 aa9.4□□□□□ -0.9
RAP1B-231ENST00000544639 KCNC4Q03721 635 aa9.38□□□□□ -0.91
RAP1B-231ENST00000544639 TATDN2Q93075 761 aa9.38□□□□□ -0.91
RAP1B-231ENST00000544639 PDE4DQ08499 809 aa9.37□□□□□ -0.91
RAP1B-231ENST00000544639 NEUROD2Q15784 382 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms