RNA–Protein interactions for RNA: ENST00000544539.5

PHC1-213, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-213ENST00000544539 VPS8Q8N3P4 1428 aa22.08■■□□□ 1.13
PHC1-213ENST00000544539 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
PHC1-213ENST00000544539 ARHGEF5Q12774 1597 aa22.07■■□□□ 1.12
PHC1-213ENST00000544539 TNRQ92752 1358 aa22.06■■□□□ 1.12
PHC1-213ENST00000544539 TCOF1Q13428 1488 aaKnown RBP22.06■■□□□ 1.12
PHC1-213ENST00000544539 PZPP20742 1482 aa22.04■■□□□ 1.12
PHC1-213ENST00000544539 LRRC9Q6ZRR7 1453 aa22.04■■□□□ 1.12
PHC1-213ENST00000544539 DISP3Q9P2K9 1392 aa22.04■■□□□ 1.12
PHC1-213ENST00000544539 THEMISQ8N1K5 641 aaPredicted RBP22.03■■□□□ 1.12
PHC1-213ENST00000544539 ZNF335Q9H4Z2 1342 aaPredicted RBP22.03■■□□□ 1.12
PHC1-213ENST00000544539 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
PHC1-213ENST00000544539 APLP2Q06481 763 aa22.01■■□□□ 1.11
PHC1-213ENST00000544539 DNMT1P26358 1616 aaKnown RBP22■■□□□ 1.11
PHC1-213ENST00000544539 UBAP1LF5GYI3 381 aa22■■□□□ 1.11
PHC1-213ENST00000544539 MIA2Q96PC5 1412 aa21.99■■□□□ 1.11
PHC1-213ENST00000544539 NLRP1Q9C000 1473 aa21.99■■□□□ 1.11
PHC1-213ENST00000544539 ANKLE2Q86XL3 938 aa21.99■■□□□ 1.11
PHC1-213ENST00000544539 FBXO31Q5XUX0 539 aaPredicted RBP21.98■■□□□ 1.11
PHC1-213ENST00000544539 MAST1Q9Y2H9 1570 aa21.95■■□□□ 1.11
PHC1-213ENST00000544539 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
PHC1-213ENST00000544539 MYOM3Q5VTT5 1437 aa21.95■■□□□ 1.1
PHC1-213ENST00000544539 POLR1AO95602 1720 aaPredicted RBP21.93■■□□□ 1.1
PHC1-213ENST00000544539 ZC3H13Q5T200 1668 aaKnown RBP21.92■■□□□ 1.1
PHC1-213ENST00000544539 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
PHC1-213ENST00000544539 UGGT1Q9NYU2 1555 aa21.91■■□□□ 1.1
PHC1-213ENST00000544539 CPS1P31327 1500 aa21.91■■□□□ 1.1
PHC1-213ENST00000544539 TOM1O60784 492 aa21.91■■□□□ 1.1
PHC1-213ENST00000544539 RNF17Q9BXT8 1623 aaKnown RBP21.9■■□□□ 1.1
PHC1-213ENST00000544539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.89■■□□□ 1.1
PHC1-213ENST00000544539 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.09
PHC1-213ENST00000544539 SPATA31D1Q6ZQQ2 1576 aa21.89■■□□□ 1.09
PHC1-213ENST00000544539 DUOX2Q9NRD8 1548 aa21.87■■□□□ 1.09
PHC1-213ENST00000544539 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
PHC1-213ENST00000544539 ABCC3O15438 1527 aa21.86■■□□□ 1.09
PHC1-213ENST00000544539 NPHP4O75161 1426 aaPredicted RBP21.85■■□□□ 1.09
PHC1-213ENST00000544539 DEPDC5O75140 1603 aa21.84■■□□□ 1.09
PHC1-213ENST00000544539 SCAF1Q9H7N4 1312 aaKnown RBP21.84■■□□□ 1.09
PHC1-213ENST00000544539 MED14O60244 1454 aa21.83■■□□□ 1.09
PHC1-213ENST00000544539 NEURL4Q96JN8 1562 aa21.83■■□□□ 1.09
PHC1-213ENST00000544539 SOCS7O14512 581 aa21.83■■□□□ 1.09
PHC1-213ENST00000544539 KIF15Q9NS87 1388 aa21.82■■□□□ 1.08
PHC1-213ENST00000544539 KANK1Q14678 1352 aa21.81■■□□□ 1.08
PHC1-213ENST00000544539 ERVK-7P63135 1459 aa21.81■■□□□ 1.08
PHC1-213ENST00000544539 ERBINQ96RT1 1412 aa21.8■■□□□ 1.08
PHC1-213ENST00000544539 PIP4K2BP78356 416 aa21.78■■□□□ 1.08
PHC1-213ENST00000544539 ILDR2Q71H61 639 aa21.78■■□□□ 1.08
PHC1-213ENST00000544539 RRP7BPQ9NSQ0 103 aa21.78■■□□□ 1.08
PHC1-213ENST00000544539 ARHGAP31Q2M1Z3 1444 aa21.77■■□□□ 1.08
PHC1-213ENST00000544539 PTPN23Q9H3S7 1636 aa21.77■■□□□ 1.07
PHC1-213ENST00000544539 IQGAP1P46940 1657 aa21.76■■□□□ 1.07
PHC1-213ENST00000544539 EID1Q9Y6B2 187 aa21.76■■□□□ 1.07
PHC1-213ENST00000544539 ANKRD30AQ9BXX3 1397 aa21.75■■□□□ 1.07
PHC1-213ENST00000544539 ABCC5O15440 1437 aa21.75■■□□□ 1.07
PHC1-213ENST00000544539 MROH1Q8NDA8 1641 aa21.74■■□□□ 1.07
PHC1-213ENST00000544539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.74■■□□□ 1.07
PHC1-213ENST00000544539 STAG3Q9UJ98 1225 aa21.74■■□□□ 1.07
PHC1-213ENST00000544539 PRDM15P57071 1507 aaPredicted RBP21.74■■□□□ 1.07
PHC1-213ENST00000544539 VWDEQ8N2E2 1590 aa21.74■■□□□ 1.07
PHC1-213ENST00000544539 DAPK1P53355 1430 aa21.73■■□□□ 1.07
PHC1-213ENST00000544539 CEP152O94986 1710 aa21.73■■□□□ 1.07
PHC1-213ENST00000544539 CROCC2H7BZ55 1655 aa21.72■■□□□ 1.07
PHC1-213ENST00000544539 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
PHC1-213ENST00000544539 TXNDC2Q86VQ3 553 aa21.71■■□□□ 1.07
PHC1-213ENST00000544539 SCAF11Q99590 1463 aaKnown RBP21.71■■□□□ 1.07
PHC1-213ENST00000544539 HSPA1LP34931 641 aa21.69■■□□□ 1.06
PHC1-213ENST00000544539 UBR1Q8IWV7 1749 aa21.69■■□□□ 1.06
PHC1-213ENST00000544539 CFAP65Q6ZU64 1925 aaKnown RBP21.68■■□□□ 1.06
PHC1-213ENST00000544539 SYNMO15061 1565 aa21.67■■□□□ 1.06
PHC1-213ENST00000544539 SLIT1O75093 1534 aa21.65■■□□□ 1.06
PHC1-213ENST00000544539 CHIC2Q9UKJ5 165 aa21.65■■□□□ 1.06
PHC1-213ENST00000544539 ARHGAP23Q9P227 1491 aa21.64■■□□□ 1.05
PHC1-213ENST00000544539 LRRC7Q96NW7 1537 aa21.63■■□□□ 1.05
PHC1-213ENST00000544539 LMTK2Q8IWU2 1503 aa21.62■■□□□ 1.05
PHC1-213ENST00000544539 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
PHC1-213ENST00000544539 LTKP29376 864 aa21.61■■□□□ 1.05
PHC1-213ENST00000544539 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
PHC1-213ENST00000544539 PHF23Q9BUL5 403 aaPredicted RBP21.6■■□□□ 1.05
PHC1-213ENST00000544539 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
PHC1-213ENST00000544539 KDM5AP29375 1690 aaKnown RBP21.6■■□□□ 1.05
PHC1-213ENST00000544539 HDGFP51858 240 aaKnown RBP21.58■■□□□ 1.05
PHC1-213ENST00000544539 EFCAB6Q5THR3 1501 aa21.58■■□□□ 1.04
PHC1-213ENST00000544539 IDI1Q13907 227 aa21.57■■□□□ 1.04
PHC1-213ENST00000544539 PIK3C2BO00750 1634 aa21.57■■□□□ 1.04
PHC1-213ENST00000544539 ADGRL2O95490 1459 aa21.57■■□□□ 1.04
PHC1-213ENST00000544539 MED1Q15648 1581 aaPredicted RBP21.56■■□□□ 1.04
PHC1-213ENST00000544539 STRCP1A6NGW2 1772 aa21.53■■□□□ 1.04
PHC1-213ENST00000544539 RPRD2Q5VT52 1461 aaKnown RBP21.53■■□□□ 1.04
PHC1-213ENST00000544539 BCANQ96GW7 911 aa21.53■■□□□ 1.04
PHC1-213ENST00000544539 ANKRD50Q9ULJ7 1429 aa21.53■■□□□ 1.04
PHC1-213ENST00000544539 KCNA6P17658 529 aa21.51■■□□□ 1.03
PHC1-213ENST00000544539 NOS1P29475 1434 aa21.51■■□□□ 1.03
PHC1-213ENST00000544539 ALKQ9UM73 1620 aa21.49■■□□□ 1.03
PHC1-213ENST00000544539 ADGRB3O60242 1522 aa21.49■■□□□ 1.03
PHC1-213ENST00000544539 PROSER2Q86WR7 435 aaPredicted RBP21.48■■□□□ 1.03
PHC1-213ENST00000544539 PPP1R15AO75807 674 aaPredicted RBP21.47■■□□□ 1.03
PHC1-213ENST00000544539 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
PHC1-213ENST00000544539 SLC26A8Q96RN1 970 aa21.46■■□□□ 1.03
PHC1-213ENST00000544539 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.44■■□□□ 1.02
PHC1-213ENST00000544539 TMEM94Q12767 1356 aa21.44■■□□□ 1.02
PHC1-213ENST00000544539 FAM135BQ49AJ0 1406 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms