RNA–Protein interactions for RNA: ENST00000544284.5

GABARAPL1-213, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3 BASIC

Gene GABARAPL1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-213ENST00000544284 ZNF142P52746 1687 aaPredicted RBP20.58■□□□□ 0.88
GABARAPL1-213ENST00000544284 NCOA1Q15788 1441 aa20.57■□□□□ 0.88
GABARAPL1-213ENST00000544284 CAMSAP1Q5T5Y3 1602 aa20.56■□□□□ 0.88
GABARAPL1-213ENST00000544284 WASHC2CQ9Y4E1 1318 aa20.56■□□□□ 0.88
GABARAPL1-213ENST00000544284 CEP170BQ9Y4F5 1589 aaPredicted RBP20.55■□□□□ 0.88
GABARAPL1-213ENST00000544284 PTPN23Q9H3S7 1636 aa20.53■□□□□ 0.88
GABARAPL1-213ENST00000544284 EIF2AK4Q9P2K8 1649 aaKnown RBP20.53■□□□□ 0.88
GABARAPL1-213ENST00000544284 PZPP20742 1482 aa20.51■□□□□ 0.87
GABARAPL1-213ENST00000544284 RNF17Q9BXT8 1623 aaKnown RBP20.51■□□□□ 0.87
GABARAPL1-213ENST00000544284 CROCC2H7BZ55 1655 aa20.5■□□□□ 0.87
GABARAPL1-213ENST00000544284 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
GABARAPL1-213ENST00000544284 A2ML1A8K2U0 1454 aa20.49■□□□□ 0.87
GABARAPL1-213ENST00000544284 SHANK2Q9UPX8 1470 aa20.49■□□□□ 0.87
GABARAPL1-213ENST00000544284 ZC3H13Q5T200 1668 aaKnown RBP20.48■□□□□ 0.87
GABARAPL1-213ENST00000544284 DUOX2Q9NRD8 1548 aa20.48■□□□□ 0.87
GABARAPL1-213ENST00000544284 TNRQ92752 1358 aa20.48■□□□□ 0.87
GABARAPL1-213ENST00000544284 FGD6Q6ZV73 1430 aa20.48■□□□□ 0.87
GABARAPL1-213ENST00000544284 PKD2Q13563 968 aa20.48■□□□□ 0.87
GABARAPL1-213ENST00000544284 FBXO31Q5XUX0 539 aaPredicted RBP20.47■□□□□ 0.87
GABARAPL1-213ENST00000544284 NCKAP5LQ9HCH0 1330 aa20.47■□□□□ 0.87
GABARAPL1-213ENST00000544284 ABCC5O15440 1437 aa20.46■□□□□ 0.87
GABARAPL1-213ENST00000544284 DNMT1P26358 1616 aaKnown RBP20.45■□□□□ 0.87
GABARAPL1-213ENST00000544284 TCOF1Q13428 1488 aaKnown RBP20.45■□□□□ 0.86
GABARAPL1-213ENST00000544284 DAPK1P53355 1430 aa20.44■□□□□ 0.86
GABARAPL1-213ENST00000544284 ABCC3O15438 1527 aa20.44■□□□□ 0.86
GABARAPL1-213ENST00000544284 KIF15Q9NS87 1388 aa20.44■□□□□ 0.86
GABARAPL1-213ENST00000544284 ERBINQ96RT1 1412 aa20.42■□□□□ 0.86
GABARAPL1-213ENST00000544284 RRP7BPQ9NSQ0 103 aa20.41■□□□□ 0.86
GABARAPL1-213ENST00000544284 NLRP1Q9C000 1473 aa20.41■□□□□ 0.86
GABARAPL1-213ENST00000544284 CEP152O94986 1710 aa20.4■□□□□ 0.86
GABARAPL1-213ENST00000544284 MROH1Q8NDA8 1641 aa20.4■□□□□ 0.86
GABARAPL1-213ENST00000544284 LTBP4Q8N2S1 1624 aa20.39■□□□□ 0.86
GABARAPL1-213ENST00000544284 ANKRD30AQ9BXX3 1397 aa20.39■□□□□ 0.85
GABARAPL1-213ENST00000544284 POLR1AO95602 1720 aaPredicted RBP20.39■□□□□ 0.85
GABARAPL1-213ENST00000544284 THEMISQ8N1K5 641 aaPredicted RBP20.38■□□□□ 0.85
GABARAPL1-213ENST00000544284 CFAP65Q6ZU64 1925 aaKnown RBP20.37■□□□□ 0.85
GABARAPL1-213ENST00000544284 CHIC2Q9UKJ5 165 aa20.36■□□□□ 0.85
GABARAPL1-213ENST00000544284 SPATA31D1Q6ZQQ2 1576 aa20.36■□□□□ 0.85
GABARAPL1-213ENST00000544284 UGGT1Q9NYU2 1555 aa20.36■□□□□ 0.85
GABARAPL1-213ENST00000544284 PRDM15P57071 1507 aaPredicted RBP20.36■□□□□ 0.85
GABARAPL1-213ENST00000544284 IQSEC2Q5JU85 1478 aa20.36■□□□□ 0.85
GABARAPL1-213ENST00000544284 FAM50AQ14320 339 aaKnown RBP20.35■□□□□ 0.85
GABARAPL1-213ENST00000544284 ERVK-7P63135 1459 aa20.34■□□□□ 0.85
GABARAPL1-213ENST00000544284 KANK1Q14678 1352 aa20.34■□□□□ 0.85
GABARAPL1-213ENST00000544284 ZNF335Q9H4Z2 1342 aaPredicted RBP20.33■□□□□ 0.85
GABARAPL1-213ENST00000544284 ANKLE2Q86XL3 938 aa20.33■□□□□ 0.85
GABARAPL1-213ENST00000544284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.33■□□□□ 0.85
GABARAPL1-213ENST00000544284 DEPDC5O75140 1603 aa20.33■□□□□ 0.84
GABARAPL1-213ENST00000544284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.84
GABARAPL1-213ENST00000544284 ARHGAP31Q2M1Z3 1444 aa20.3■□□□□ 0.84
GABARAPL1-213ENST00000544284 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
GABARAPL1-213ENST00000544284 ADGRL2O95490 1459 aa20.29■□□□□ 0.84
GABARAPL1-213ENST00000544284 NPHP4O75161 1426 aaPredicted RBP20.25■□□□□ 0.83
GABARAPL1-213ENST00000544284 UBR1Q8IWV7 1749 aa20.24■□□□□ 0.83
GABARAPL1-213ENST00000544284 MED14O60244 1454 aa20.24■□□□□ 0.83
GABARAPL1-213ENST00000544284 LMTK2Q8IWU2 1503 aa20.24■□□□□ 0.83
GABARAPL1-213ENST00000544284 VWDEQ8N2E2 1590 aa20.23■□□□□ 0.83
GABARAPL1-213ENST00000544284 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
GABARAPL1-213ENST00000544284 ANKRD50Q9ULJ7 1429 aa20.22■□□□□ 0.83
GABARAPL1-213ENST00000544284 CPS1P31327 1500 aa20.22■□□□□ 0.83
GABARAPL1-213ENST00000544284 STAG3Q9UJ98 1225 aa20.19■□□□□ 0.82
GABARAPL1-213ENST00000544284 UBAP1LF5GYI3 381 aa20.18■□□□□ 0.82
GABARAPL1-213ENST00000544284 EFCAB6Q5THR3 1501 aa20.17■□□□□ 0.82
GABARAPL1-213ENST00000544284 PIK3C2BO00750 1634 aa20.17■□□□□ 0.82
GABARAPL1-213ENST00000544284 SCAF11Q99590 1463 aaKnown RBP20.16■□□□□ 0.82
GABARAPL1-213ENST00000544284 SLIT1O75093 1534 aa20.16■□□□□ 0.82
GABARAPL1-213ENST00000544284 TXNDC2Q86VQ3 553 aa20.15■□□□□ 0.82
GABARAPL1-213ENST00000544284 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
GABARAPL1-213ENST00000544284 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
GABARAPL1-213ENST00000544284 KDM5AP29375 1690 aaKnown RBP20.15■□□□□ 0.82
GABARAPL1-213ENST00000544284 ARHGAP23Q9P227 1491 aa20.14■□□□□ 0.81
GABARAPL1-213ENST00000544284 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
GABARAPL1-213ENST00000544284 RPRD2Q5VT52 1461 aaKnown RBP20.12■□□□□ 0.81
GABARAPL1-213ENST00000544284 TET3O43151 1660 aa20.12■□□□□ 0.81
GABARAPL1-213ENST00000544284 SYNMO15061 1565 aa20.12■□□□□ 0.81
GABARAPL1-213ENST00000544284 NOS1P29475 1434 aa20.11■□□□□ 0.81
GABARAPL1-213ENST00000544284 ITGAEP38570 1179 aa20.11■□□□□ 0.81
GABARAPL1-213ENST00000544284 IDI1Q13907 227 aa20.11■□□□□ 0.81
GABARAPL1-213ENST00000544284 UNC13BO14795 1591 aa20.11■□□□□ 0.81
GABARAPL1-213ENST00000544284 TMEM2Q9UHN6 1383 aa20.1■□□□□ 0.81
GABARAPL1-213ENST00000544284 GCC2Q8IWJ2 1684 aa20.1■□□□□ 0.81
GABARAPL1-213ENST00000544284 TOM1O60784 492 aa20.1■□□□□ 0.81
GABARAPL1-213ENST00000544284 LTKP29376 864 aa20.1■□□□□ 0.81
GABARAPL1-213ENST00000544284 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
GABARAPL1-213ENST00000544284 ADGRB3O60242 1522 aa20.07■□□□□ 0.8
GABARAPL1-213ENST00000544284 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
GABARAPL1-213ENST00000544284 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
GABARAPL1-213ENST00000544284 IQGAP3Q86VI3 1631 aa20.04■□□□□ 0.8
GABARAPL1-213ENST00000544284 PIP4K2BP78356 416 aa20.03■□□□□ 0.8
GABARAPL1-213ENST00000544284 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
GABARAPL1-213ENST00000544284 LRRC7Q96NW7 1537 aa20.02■□□□□ 0.8
GABARAPL1-213ENST00000544284 DISP3Q9P2K9 1392 aa20.02■□□□□ 0.8
GABARAPL1-213ENST00000544284 E9PCH4 1651 aa20.01■□□□□ 0.79
GABARAPL1-213ENST00000544284 NUP155O75694 1391 aa20.01■□□□□ 0.79
GABARAPL1-213ENST00000544284 HDGFP51858 240 aaKnown RBP20■□□□□ 0.79
GABARAPL1-213ENST00000544284 MYO5BQ9ULV0 1848 aa19.99■□□□□ 0.79
GABARAPL1-213ENST00000544284 RRBP1Q9P2E9 1410 aaKnown RBP19.99■□□□□ 0.79
GABARAPL1-213ENST00000544284 BCANQ96GW7 911 aa19.98■□□□□ 0.79
GABARAPL1-213ENST00000544284 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
GABARAPL1-213ENST00000544284 PPP1R15AO75807 674 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms