RNA–Protein interactions for RNA: ENST00000544276.1

LMO3-230, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-230ENST00000544276 TCOF1Q13428 1488 aaKnown RBP16.6■□□□□ 0.25
LMO3-230ENST00000544276 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
LMO3-230ENST00000544276 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
LMO3-230ENST00000544276 MYOM3Q5VTT5 1437 aa16.59■□□□□ 0.25
LMO3-230ENST00000544276 PZPP20742 1482 aa16.59■□□□□ 0.25
LMO3-230ENST00000544276 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
LMO3-230ENST00000544276 KDM5DQ9BY66 1539 aa16.59■□□□□ 0.25
LMO3-230ENST00000544276 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
LMO3-230ENST00000544276 NCKAP5LQ9HCH0 1330 aa16.58■□□□□ 0.24
LMO3-230ENST00000544276 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.24
LMO3-230ENST00000544276 MYO3AQ8NEV4 1616 aa16.58■□□□□ 0.24
LMO3-230ENST00000544276 ZNF142P52746 1687 aaPredicted RBP16.58■□□□□ 0.24
LMO3-230ENST00000544276 MAST1Q9Y2H9 1570 aa16.56■□□□□ 0.24
LMO3-230ENST00000544276 TNRQ92752 1358 aa16.56■□□□□ 0.24
LMO3-230ENST00000544276 FBXO31Q5XUX0 539 aaPredicted RBP16.55■□□□□ 0.24
LMO3-230ENST00000544276 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
LMO3-230ENST00000544276 APLP2Q06481 763 aa16.52■□□□□ 0.24
LMO3-230ENST00000544276 NLRP1Q9C000 1473 aa16.51■□□□□ 0.23
LMO3-230ENST00000544276 DNMT1P26358 1616 aaKnown RBP16.51■□□□□ 0.23
LMO3-230ENST00000544276 ZNF335Q9H4Z2 1342 aaPredicted RBP16.5■□□□□ 0.23
LMO3-230ENST00000544276 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
LMO3-230ENST00000544276 RNF17Q9BXT8 1623 aaKnown RBP16.49■□□□□ 0.23
LMO3-230ENST00000544276 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
LMO3-230ENST00000544276 ABCC3O15438 1527 aa16.48■□□□□ 0.23
LMO3-230ENST00000544276 DUOX2Q9NRD8 1548 aa16.48■□□□□ 0.23
LMO3-230ENST00000544276 EIF2AK4Q9P2K8 1649 aaKnown RBP16.48■□□□□ 0.23
LMO3-230ENST00000544276 ABCC5O15440 1437 aa16.47■□□□□ 0.23
LMO3-230ENST00000544276 ANKLE2Q86XL3 938 aa16.47■□□□□ 0.23
LMO3-230ENST00000544276 KIF15Q9NS87 1388 aa16.45■□□□□ 0.22
LMO3-230ENST00000544276 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
LMO3-230ENST00000544276 ZC3H13Q5T200 1668 aaKnown RBP16.44■□□□□ 0.22
LMO3-230ENST00000544276 SPATA31D1Q6ZQQ2 1576 aa16.44■□□□□ 0.22
LMO3-230ENST00000544276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.44■□□□□ 0.22
LMO3-230ENST00000544276 FGD6Q6ZV73 1430 aa16.44■□□□□ 0.22
LMO3-230ENST00000544276 UGGT1Q9NYU2 1555 aa16.43■□□□□ 0.22
LMO3-230ENST00000544276 MED14O60244 1454 aa16.43■□□□□ 0.22
LMO3-230ENST00000544276 MROH1Q8NDA8 1641 aa16.43■□□□□ 0.22
LMO3-230ENST00000544276 ARHGAP31Q2M1Z3 1444 aa16.43■□□□□ 0.22
LMO3-230ENST00000544276 ERVK-7P63135 1459 aa16.42■□□□□ 0.22
LMO3-230ENST00000544276 DAPK1P53355 1430 aa16.42■□□□□ 0.22
LMO3-230ENST00000544276 NEURL4Q96JN8 1562 aa16.42■□□□□ 0.22
LMO3-230ENST00000544276 RRP7BPQ9NSQ0 103 aa16.41■□□□□ 0.22
LMO3-230ENST00000544276 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
LMO3-230ENST00000544276 CPS1P31327 1500 aa16.4■□□□□ 0.22
LMO3-230ENST00000544276 PRDM15P57071 1507 aaPredicted RBP16.4■□□□□ 0.22
LMO3-230ENST00000544276 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
LMO3-230ENST00000544276 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
LMO3-230ENST00000544276 DEPDC5O75140 1603 aa16.38■□□□□ 0.21
LMO3-230ENST00000544276 NPHP4O75161 1426 aaPredicted RBP16.38■□□□□ 0.21
LMO3-230ENST00000544276 KANK1Q14678 1352 aa16.36■□□□□ 0.21
LMO3-230ENST00000544276 CROCC2H7BZ55 1655 aa16.35■□□□□ 0.21
LMO3-230ENST00000544276 POLR1AO95602 1720 aaPredicted RBP16.35■□□□□ 0.21
LMO3-230ENST00000544276 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
LMO3-230ENST00000544276 LMTK2Q8IWU2 1503 aa16.34■□□□□ 0.21
LMO3-230ENST00000544276 TOM1O60784 492 aa16.33■□□□□ 0.2
LMO3-230ENST00000544276 ADGRL2O95490 1459 aa16.33■□□□□ 0.2
LMO3-230ENST00000544276 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
LMO3-230ENST00000544276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.2
LMO3-230ENST00000544276 ARHGAP23Q9P227 1491 aa16.32■□□□□ 0.2
LMO3-230ENST00000544276 CHIC2Q9UKJ5 165 aa16.32■□□□□ 0.2
LMO3-230ENST00000544276 SLIT1O75093 1534 aa16.3■□□□□ 0.2
LMO3-230ENST00000544276 SCAF11Q99590 1463 aaKnown RBP16.3■□□□□ 0.2
LMO3-230ENST00000544276 CEP152O94986 1710 aa16.28■□□□□ 0.2
LMO3-230ENST00000544276 LTKP29376 864 aa16.28■□□□□ 0.2
LMO3-230ENST00000544276 TXNDC2Q86VQ3 553 aa16.28■□□□□ 0.2
LMO3-230ENST00000544276 EID1Q9Y6B2 187 aa16.28■□□□□ 0.2
LMO3-230ENST00000544276 IQGAP1P46940 1657 aa16.27■□□□□ 0.2
LMO3-230ENST00000544276 TMEM2Q9UHN6 1383 aa16.27■□□□□ 0.2
LMO3-230ENST00000544276 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
LMO3-230ENST00000544276 UBR1Q8IWV7 1749 aa16.27■□□□□ 0.19
LMO3-230ENST00000544276 IDI1Q13907 227 aa16.26■□□□□ 0.19
LMO3-230ENST00000544276 NOS1P29475 1434 aa16.26■□□□□ 0.19
LMO3-230ENST00000544276 ANKRD50Q9ULJ7 1429 aa16.26■□□□□ 0.19
LMO3-230ENST00000544276 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
LMO3-230ENST00000544276 ILDR2Q71H61 639 aa16.24■□□□□ 0.19
LMO3-230ENST00000544276 LRRC7Q96NW7 1537 aa16.24■□□□□ 0.19
LMO3-230ENST00000544276 RPRD2Q5VT52 1461 aaKnown RBP16.23■□□□□ 0.19
LMO3-230ENST00000544276 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
LMO3-230ENST00000544276 EFCAB6Q5THR3 1501 aa16.23■□□□□ 0.19
LMO3-230ENST00000544276 HSPA1LP34931 641 aa16.22■□□□□ 0.19
LMO3-230ENST00000544276 PIP4K2BP78356 416 aa16.22■□□□□ 0.19
LMO3-230ENST00000544276 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
LMO3-230ENST00000544276 KDM5AP29375 1690 aaKnown RBP16.21■□□□□ 0.19
LMO3-230ENST00000544276 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
LMO3-230ENST00000544276 SYNMO15061 1565 aa16.2■□□□□ 0.18
LMO3-230ENST00000544276 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
LMO3-230ENST00000544276 SOCS7O14512 581 aa16.19■□□□□ 0.18
LMO3-230ENST00000544276 ALKQ9UM73 1620 aa16.19■□□□□ 0.18
LMO3-230ENST00000544276 ADGRB3O60242 1522 aa16.16■□□□□ 0.18
LMO3-230ENST00000544276 KCNA6P17658 529 aa16.15■□□□□ 0.18
LMO3-230ENST00000544276 STRCP1A6NGW2 1772 aa16.15■□□□□ 0.18
LMO3-230ENST00000544276 TET3O43151 1660 aa16.14■□□□□ 0.18
LMO3-230ENST00000544276 HDGFP51858 240 aaKnown RBP16.14■□□□□ 0.17
LMO3-230ENST00000544276 CFAP65Q6ZU64 1925 aaKnown RBP16.12■□□□□ 0.17
LMO3-230ENST00000544276 UNC13BO14795 1591 aa16.12■□□□□ 0.17
LMO3-230ENST00000544276 ZFYVE9O95405 1425 aa16.11■□□□□ 0.17
LMO3-230ENST00000544276 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
LMO3-230ENST00000544276 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
LMO3-230ENST00000544276 PLEKHG1Q9ULL1 1385 aa16.1■□□□□ 0.17
LMO3-230ENST00000544276 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms