RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 WDR62O43379 1518 aa13.35□□□□□ -0.27
TCF4-209ENST00000544241 RAD54L2Q9Y4B4 1467 aa13.35□□□□□ -0.27
TCF4-209ENST00000544241 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
TCF4-209ENST00000544241 PLIN1O60240 522 aa13.33□□□□□ -0.28
TCF4-209ENST00000544241 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
TCF4-209ENST00000544241 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
TCF4-209ENST00000544241 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
TCF4-209ENST00000544241 BLMP54132 1417 aaPredicted RBP13.32□□□□□ -0.28
TCF4-209ENST00000544241 UHRF1BP1Q6BDS2 1440 aa13.32□□□□□ -0.28
TCF4-209ENST00000544241 LRRIQ1Q96JM4 1722 aa13.32□□□□□ -0.28
TCF4-209ENST00000544241 EIF3AQ14152 1382 aaKnown RBP13.31□□□□□ -0.28
TCF4-209ENST00000544241 ABCA10Q8WWZ4 1543 aa13.31□□□□□ -0.28
TCF4-209ENST00000544241 TPM2P07951 284 aa13.31□□□□□ -0.28
TCF4-209ENST00000544241 CDCA7LQ96GN5 454 aa13.3□□□□□ -0.28
TCF4-209ENST00000544241 UPF2Q9HAU5 1272 aaKnown RBP13.3□□□□□ -0.28
TCF4-209ENST00000544241 CENPJQ9HC77 1338 aaPredicted RBP13.3□□□□□ -0.28
TCF4-209ENST00000544241 MRE11P49959 708 aa13.3□□□□□ -0.28
TCF4-209ENST00000544241 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
TCF4-209ENST00000544241 FSD2A1L4K1 749 aa13.29□□□□□ -0.28
TCF4-209ENST00000544241 PDCL3Q9H2J4 239 aa13.29□□□□□ -0.28
TCF4-209ENST00000544241 MAPK8IP3Q9UPT6 1336 aa13.29□□□□□ -0.28
TCF4-209ENST00000544241 DAPK1P53355 1430 aa13.28□□□□□ -0.28
TCF4-209ENST00000544241 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.28
TCF4-209ENST00000544241 E9PCH4 1651 aa13.28□□□□□ -0.28
TCF4-209ENST00000544241 ZNF326Q5BKZ1 582 aaKnown RBP13.28□□□□□ -0.28
TCF4-209ENST00000544241 SKAP1Q86WV1 359 aa13.28□□□□□ -0.28
TCF4-209ENST00000544241 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
TCF4-209ENST00000544241 KIAA1107Q9UPP5 1409 aa13.27□□□□□ -0.28
TCF4-209ENST00000544241 RGS3P49796 1198 aa13.27□□□□□ -0.28
TCF4-209ENST00000544241 ARHGEF12Q9NZN5 1544 aa13.27□□□□□ -0.29
TCF4-209ENST00000544241 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
TCF4-209ENST00000544241 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
TCF4-209ENST00000544241 TRIM44Q96DX7 344 aaPredicted RBP13.25□□□□□ -0.29
TCF4-209ENST00000544241 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
TCF4-209ENST00000544241 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
TCF4-209ENST00000544241 MAGI3Q5TCQ9 1506 aa13.25□□□□□ -0.29
TCF4-209ENST00000544241 DNMT1P26358 1616 aaKnown RBP13.24□□□□□ -0.29
TCF4-209ENST00000544241 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
TCF4-209ENST00000544241 ESPNB1AK53 854 aa13.24□□□□□ -0.29
TCF4-209ENST00000544241 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
TCF4-209ENST00000544241 ZMYM3Q14202 1370 aa13.24□□□□□ -0.29
TCF4-209ENST00000544241 C20orf194Q5TEA3 1177 aa13.23□□□□□ -0.29
TCF4-209ENST00000544241 ANTXR1Q9H6X2 564 aa13.23□□□□□ -0.29
TCF4-209ENST00000544241 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
TCF4-209ENST00000544241 PZPP20742 1482 aa13.23□□□□□ -0.29
TCF4-209ENST00000544241 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
TCF4-209ENST00000544241 MCM4P33991 863 aa13.22□□□□□ -0.29
TCF4-209ENST00000544241 CALD1Q05682 793 aaKnown RBP13.22□□□□□ -0.29
TCF4-209ENST00000544241 ABCC5O15440 1437 aa13.21□□□□□ -0.29
TCF4-209ENST00000544241 IFT140Q96RY7 1462 aa13.21□□□□□ -0.29
TCF4-209ENST00000544241 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
TCF4-209ENST00000544241 USP19O94966 1318 aa13.21□□□□□ -0.3
TCF4-209ENST00000544241 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
TCF4-209ENST00000544241 DDX11L8A8MPP1 907 aa13.2□□□□□ -0.3
TCF4-209ENST00000544241 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
TCF4-209ENST00000544241 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
TCF4-209ENST00000544241 NINLQ9Y2I6 1382 aa13.19□□□□□ -0.3
TCF4-209ENST00000544241 AAMPQ13685 434 aa13.19□□□□□ -0.3
TCF4-209ENST00000544241 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
TCF4-209ENST00000544241 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
TCF4-209ENST00000544241 PTMSP20962 102 aa13.18□□□□□ -0.3
TCF4-209ENST00000544241 GRPEL1Q9HAV7 217 aa13.18□□□□□ -0.3
TCF4-209ENST00000544241 TRAK2O60296 914 aa13.18□□□□□ -0.3
TCF4-209ENST00000544241 TERF1P54274 439 aa13.18□□□□□ -0.3
TCF4-209ENST00000544241 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
TCF4-209ENST00000544241 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
TCF4-209ENST00000544241 ANKRD30AQ9BXX3 1397 aa13.17□□□□□ -0.3
TCF4-209ENST00000544241 PANK2Q9BZ23 570 aa13.16□□□□□ -0.3
TCF4-209ENST00000544241 PKD2Q13563 968 aa13.16□□□□□ -0.3
TCF4-209ENST00000544241 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
TCF4-209ENST00000544241 ARXQ96QS3 562 aa13.16□□□□□ -0.3
TCF4-209ENST00000544241 TBC1D32Q96NH3 1257 aa13.15□□□□□ -0.3
TCF4-209ENST00000544241 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
TCF4-209ENST00000544241 ANP32BQ92688 251 aaKnown RBP13.14□□□□□ -0.31
TCF4-209ENST00000544241 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
TCF4-209ENST00000544241 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
TCF4-209ENST00000544241 MTERF4Q7Z6M4 381 aaKnown RBP13.14□□□□□ -0.31
TCF4-209ENST00000544241 NGEFQ8N5V2 710 aa13.14□□□□□ -0.31
TCF4-209ENST00000544241 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
TCF4-209ENST00000544241 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
TCF4-209ENST00000544241 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
TCF4-209ENST00000544241 SKOR2Q2VWA4 1001 aaPredicted RBP13.13□□□□□ -0.31
TCF4-209ENST00000544241 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
TCF4-209ENST00000544241 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.12□□□□□ -0.31
TCF4-209ENST00000544241 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
TCF4-209ENST00000544241 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
TCF4-209ENST00000544241 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
TCF4-209ENST00000544241 ADGRL2O95490 1459 aa13.11□□□□□ -0.31
TCF4-209ENST00000544241 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
TCF4-209ENST00000544241 ADAMTS8Q9UP79 889 aa13.11□□□□□ -0.31
TCF4-209ENST00000544241 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
TCF4-209ENST00000544241 EIF4G3O43432 1585 aaKnown RBP13.1□□□□□ -0.31
TCF4-209ENST00000544241 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
TCF4-209ENST00000544241 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
TCF4-209ENST00000544241 SEC24BO95487 1268 aa13.09□□□□□ -0.31
TCF4-209ENST00000544241 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
TCF4-209ENST00000544241 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
TCF4-209ENST00000544241 E9PSI1 815 aa13.09□□□□□ -0.31
TCF4-209ENST00000544241 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
TCF4-209ENST00000544241 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms