RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
SMCO2-206ENST00000543991 JPH4Q96JJ6 628 aa12.7□□□□□ -0.38
SMCO2-206ENST00000543991 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
SMCO2-206ENST00000543991 FOSBP53539 338 aa12.65□□□□□ -0.38
SMCO2-206ENST00000543991 GIGYF2Q6Y7W6 1299 aaKnown RBP12.65□□□□□ -0.38
SMCO2-206ENST00000543991 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
SMCO2-206ENST00000543991 CERKQ8TCT0 537 aa12.62□□□□□ -0.39
SMCO2-206ENST00000543991 GOPCQ9HD26 462 aa12.61□□□□□ -0.39
SMCO2-206ENST00000543991 MS4A1P11836 297 aa12.6□□□□□ -0.39
SMCO2-206ENST00000543991 CLCN1P35523 988 aa12.6□□□□□ -0.39
SMCO2-206ENST00000543991 TMUB1Q9BVT8 246 aa12.6□□□□□ -0.39
SMCO2-206ENST00000543991 REPIN1Q9BWE0 567 aaKnown RBP12.6□□□□□ -0.39
SMCO2-206ENST00000543991 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
SMCO2-206ENST00000543991 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
SMCO2-206ENST00000543991 ZDHHC16Q969W1 377 aa12.59□□□□□ -0.39
SMCO2-206ENST00000543991 POTEJP0CG39 1038 aa12.58□□□□□ -0.4
SMCO2-206ENST00000543991 HOXB3P14651 431 aaPredicted RBP12.58□□□□□ -0.4
SMCO2-206ENST00000543991 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.4
SMCO2-206ENST00000543991 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
SMCO2-206ENST00000543991 NUDT7P0C024 238 aa12.57□□□□□ -0.4
SMCO2-206ENST00000543991 ARSIQ5FYB1 569 aa12.57□□□□□ -0.4
SMCO2-206ENST00000543991 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
SMCO2-206ENST00000543991 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
SMCO2-206ENST00000543991 ABCC9O60706 1549 aa12.57□□□□□ -0.4
SMCO2-206ENST00000543991 OATP04181 439 aa12.56□□□□□ -0.4
SMCO2-206ENST00000543991 MDM2Q00987 491 aaPredicted RBP12.56□□□□□ -0.4
SMCO2-206ENST00000543991 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMCO2-206ENST00000543991 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
SMCO2-206ENST00000543991 ARXQ96QS3 562 aa12.54□□□□□ -0.4
SMCO2-206ENST00000543991 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
SMCO2-206ENST00000543991 GPR153Q6NV75 609 aa12.53□□□□□ -0.4
SMCO2-206ENST00000543991 METTL3Q86U44 580 aaKnown RBP12.53□□□□□ -0.4
SMCO2-206ENST00000543991 TTC13Q8NBP0 860 aa12.53□□□□□ -0.4
SMCO2-206ENST00000543991 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
SMCO2-206ENST00000543991 SUPT5HO00267 1087 aaKnown RBP12.52□□□□□ -0.41
SMCO2-206ENST00000543991 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
SMCO2-206ENST00000543991 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.41
SMCO2-206ENST00000543991 SSTR3P32745 418 aaPredicted RBP12.51□□□□□ -0.41
SMCO2-206ENST00000543991 ZMYND15Q9H091 742 aa12.51□□□□□ -0.41
SMCO2-206ENST00000543991 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
SMCO2-206ENST00000543991 MAMSTRQ6ZN01 415 aa12.5□□□□□ -0.41
SMCO2-206ENST00000543991 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
SMCO2-206ENST00000543991 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
SMCO2-206ENST00000543991 SCUBE2Q9NQ36 999 aa12.5□□□□□ -0.41
SMCO2-206ENST00000543991 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
SMCO2-206ENST00000543991 PRSS12P56730 875 aa12.48□□□□□ -0.41
SMCO2-206ENST00000543991 SH3D19Q5HYK7 790 aa12.48□□□□□ -0.41
SMCO2-206ENST00000543991 FAM217BQ9NTX9 383 aaPredicted RBP12.47□□□□□ -0.41
SMCO2-206ENST00000543991 CDCA7LQ96GN5 454 aa12.46□□□□□ -0.41
SMCO2-206ENST00000543991 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.41
SMCO2-206ENST00000543991 LHX6Q9UPM6 363 aa12.46□□□□□ -0.41
SMCO2-206ENST00000543991 PSDA5PKW4 1024 aaPredicted RBP12.45□□□□□ -0.42
SMCO2-206ENST00000543991 FLIIQ13045 1269 aa12.45□□□□□ -0.42
SMCO2-206ENST00000543991 PPP4R3BQ5MIZ7 849 aa12.45□□□□□ -0.42
SMCO2-206ENST00000543991 BEGAINQ9BUH8 593 aa12.45□□□□□ -0.42
SMCO2-206ENST00000543991 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
SMCO2-206ENST00000543991 NLRP7Q8WX94 980 aa12.44□□□□□ -0.42
SMCO2-206ENST00000543991 SKIV2LQ15477 1246 aaKnown RBP12.43□□□□□ -0.42
SMCO2-206ENST00000543991 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
SMCO2-206ENST00000543991 COL9A1P20849 921 aa12.4□□□□□ -0.42
SMCO2-206ENST00000543991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.38□□□□□ -0.43
SMCO2-206ENST00000543991 SNPHO15079 494 aa12.38□□□□□ -0.43
SMCO2-206ENST00000543991 ONECUT3O60422 494 aaPredicted RBP12.38□□□□□ -0.43
SMCO2-206ENST00000543991 FAM198AQ9UFP1 575 aa12.38□□□□□ -0.43
SMCO2-206ENST00000543991 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
SMCO2-206ENST00000543991 PTPREP23469 700 aa12.37□□□□□ -0.43
SMCO2-206ENST00000543991 HOMEZQ8IX15 550 aa12.37□□□□□ -0.43
SMCO2-206ENST00000543991 EYA1Q99502 592 aa12.36□□□□□ -0.43
SMCO2-206ENST00000543991 RCCD1A6NED2 376 aa12.34□□□□□ -0.43
SMCO2-206ENST00000543991 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
SMCO2-206ENST00000543991 TSKSQ9UJT2 592 aa12.34□□□□□ -0.43
SMCO2-206ENST00000543991 DIXDC1Q155Q3 683 aa12.33□□□□□ -0.44
SMCO2-206ENST00000543991 MYSM1Q5VVJ2 828 aa12.33□□□□□ -0.44
SMCO2-206ENST00000543991 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
SMCO2-206ENST00000543991 POLR3EQ9NVU0 708 aa12.33□□□□□ -0.44
SMCO2-206ENST00000543991 ATP1B4Q9UN42 357 aaPredicted RBP12.32□□□□□ -0.44
SMCO2-206ENST00000543991 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
SMCO2-206ENST00000543991 NUDT18Q6ZVK8 323 aa12.31□□□□□ -0.44
SMCO2-206ENST00000543991 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
SMCO2-206ENST00000543991 TRIM6-TRIM34B2RNG4 842 aa12.3□□□□□ -0.44
SMCO2-206ENST00000543991 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
SMCO2-206ENST00000543991 DNAJB2P25686 324 aa12.29□□□□□ -0.44
SMCO2-206ENST00000543991 CLK2P49760 499 aaKnown RBP12.29□□□□□ -0.44
SMCO2-206ENST00000543991 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMCO2-206ENST00000543991 SULF1Q8IWU6 871 aa12.28□□□□□ -0.44
SMCO2-206ENST00000543991 TATDN2Q93075 761 aa12.28□□□□□ -0.44
SMCO2-206ENST00000543991 PNMA3Q9UL41 463 aa12.28□□□□□ -0.44
SMCO2-206ENST00000543991 C3orf80F5H4A9 247 aa12.27□□□□□ -0.45
SMCO2-206ENST00000543991 MCM6Q14566 821 aa12.27□□□□□ -0.45
SMCO2-206ENST00000543991 CD46P15529 392 aa12.26□□□□□ -0.45
SMCO2-206ENST00000543991 A6NJR5 290 aa12.25□□□□□ -0.45
SMCO2-206ENST00000543991 UBTFP17480 764 aaKnown RBP12.24□□□□□ -0.45
SMCO2-206ENST00000543991 SPIRE2Q8WWL2 714 aa12.24□□□□□ -0.45
SMCO2-206ENST00000543991 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
SMCO2-206ENST00000543991 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
SMCO2-206ENST00000543991 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
SMCO2-206ENST00000543991 DDX11L8A8MPP1 907 aa12.22□□□□□ -0.45
SMCO2-206ENST00000543991 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
SMCO2-206ENST00000543991 RIC3Q7Z5B4 369 aa12.22□□□□□ -0.45
SMCO2-206ENST00000543991 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms