RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
PTPRO-209ENST00000543886 POLR1AO95602 1720 aaPredicted RBP23.86■■□□□ 1.41
PTPRO-209ENST00000543886 RALGAPBQ86X10 1494 aa23.84■■□□□ 1.41
PTPRO-209ENST00000543886 CCDC7Q96M83 1385 aa23.84■■□□□ 1.41
PTPRO-209ENST00000543886 SCAPERQ9BY12 1400 aa23.84■■□□□ 1.41
PTPRO-209ENST00000543886 PLA2R1Q13018 1463 aa23.81■■□□□ 1.4
PTPRO-209ENST00000543886 CNTLNQ9NXG0 1405 aa23.81■■□□□ 1.4
PTPRO-209ENST00000543886 USP47Q96K76 1375 aa23.81■■□□□ 1.4
PTPRO-209ENST00000543886 CFAP74Q9C0B2 1584 aa23.8■■□□□ 1.4
PTPRO-209ENST00000543886 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
PTPRO-209ENST00000543886 KDM5CP41229 1560 aa23.8■■□□□ 1.4
PTPRO-209ENST00000543886 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
PTPRO-209ENST00000543886 ATP10AO60312 1499 aa23.78■■□□□ 1.4
PTPRO-209ENST00000543886 DEPDC5O75140 1603 aa23.78■■□□□ 1.4
PTPRO-209ENST00000543886 C11orf95C9JLR9 678 aaPredicted RBP23.78■■□□□ 1.4
PTPRO-209ENST00000543886 MYT1LQ9UL68 1186 aa23.78■■□□□ 1.4
PTPRO-209ENST00000543886 CD109Q6YHK3 1445 aa23.75■■□□□ 1.39
PTPRO-209ENST00000543886 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
PTPRO-209ENST00000543886 EIF2AK4Q9P2K8 1649 aaKnown RBP23.74■■□□□ 1.39
PTPRO-209ENST00000543886 ZNF518AQ6AHZ1 1483 aa23.74■■□□□ 1.39
PTPRO-209ENST00000543886 E9PCH4 1651 aa23.73■■□□□ 1.39
PTPRO-209ENST00000543886 CARD11Q9BXL7 1154 aa23.72■■□□□ 1.39
PTPRO-209ENST00000543886 KANK1Q14678 1352 aa23.71■■□□□ 1.39
PTPRO-209ENST00000543886 PRAG1Q86YV5 1406 aa23.7■■□□□ 1.38
PTPRO-209ENST00000543886 RGL3Q3MIN7 710 aa23.7■■□□□ 1.38
PTPRO-209ENST00000543886 A2MP01023 1474 aa23.7■■□□□ 1.38
PTPRO-209ENST00000543886 TET3O43151 1660 aa23.7■■□□□ 1.38
PTPRO-209ENST00000543886 BCORL1Q5H9F3 1711 aa23.7■■□□□ 1.38
PTPRO-209ENST00000543886 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.38
PTPRO-209ENST00000543886 DHX29Q7Z478 1369 aaKnown RBP23.7■■□□□ 1.38
PTPRO-209ENST00000543886 TRPM1Q7Z4N2 1603 aa23.69■■□□□ 1.38
PTPRO-209ENST00000543886 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
PTPRO-209ENST00000543886 VWDEQ8N2E2 1590 aa23.67■■□□□ 1.38
PTPRO-209ENST00000543886 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
PTPRO-209ENST00000543886 KIF3BO15066 747 aa23.66■■□□□ 1.38
PTPRO-209ENST00000543886 TRPM2O94759 1503 aa23.66■■□□□ 1.38
PTPRO-209ENST00000543886 PRDM15P57071 1507 aaPredicted RBP23.66■■□□□ 1.38
PTPRO-209ENST00000543886 POGZQ7Z3K3 1410 aa23.66■■□□□ 1.38
PTPRO-209ENST00000543886 ARID4BQ4LE39 1312 aaPredicted RBP23.65■■□□□ 1.38
PTPRO-209ENST00000543886 MROH1Q8NDA8 1641 aa23.62■■□□□ 1.37
PTPRO-209ENST00000543886 PTPRTO14522 1441 aa23.61■■□□□ 1.37
PTPRO-209ENST00000543886 CEP152O94986 1710 aa23.61■■□□□ 1.37
PTPRO-209ENST00000543886 HECW2Q9P2P5 1572 aa23.61■■□□□ 1.37
PTPRO-209ENST00000543886 NEO1Q92859 1461 aa23.6■■□□□ 1.37
PTPRO-209ENST00000543886 LAMC1P11047 1609 aa23.59■■□□□ 1.37
PTPRO-209ENST00000543886 MLH3Q9UHC1 1453 aa23.59■■□□□ 1.37
PTPRO-209ENST00000543886 POLR3GLQ9BT43 218 aa23.58■■□□□ 1.37
PTPRO-209ENST00000543886 CLTCL1P53675 1640 aa23.58■■□□□ 1.36
PTPRO-209ENST00000543886 ST20-MTHFSA0A0A6YYL1 179 aa23.57■■□□□ 1.36
PTPRO-209ENST00000543886 GPRASP1Q5JY77 1395 aa23.57■■□□□ 1.36
PTPRO-209ENST00000543886 RNF17Q9BXT8 1623 aaKnown RBP23.57■■□□□ 1.36
PTPRO-209ENST00000543886 PRKRIP1Q9H875 184 aaPredicted RBP23.56■■□□□ 1.36
PTPRO-209ENST00000543886 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
PTPRO-209ENST00000543886 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
PTPRO-209ENST00000543886 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
PTPRO-209ENST00000543886 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
PTPRO-209ENST00000543886 EFCAB6Q5THR3 1501 aa23.54■■□□□ 1.36
PTPRO-209ENST00000543886 MAP3K4Q9Y6R4 1608 aa23.53■■□□□ 1.36
PTPRO-209ENST00000543886 NBPF1Q3BBV0 1214 aa23.52■■□□□ 1.35
PTPRO-209ENST00000543886 LMTK2Q8IWU2 1503 aa23.51■■□□□ 1.35
PTPRO-209ENST00000543886 FRMPD1Q5SYB0 1578 aa23.51■■□□□ 1.35
PTPRO-209ENST00000543886 ABCA6Q8N139 1617 aa23.51■■□□□ 1.35
PTPRO-209ENST00000543886 PPRC1Q5VV67 1664 aaKnown RBP23.5■■□□□ 1.35
PTPRO-209ENST00000543886 MADDQ8WXG6 1647 aa23.5■■□□□ 1.35
PTPRO-209ENST00000543886 GLI2P10070 1586 aa23.48■■□□□ 1.35
PTPRO-209ENST00000543886 NEURL4Q96JN8 1562 aa23.47■■□□□ 1.35
PTPRO-209ENST00000543886 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
PTPRO-209ENST00000543886 RICTORQ6R327 1708 aa23.44■■□□□ 1.34
PTPRO-209ENST00000543886 RAPGEF3O95398 923 aa23.44■■□□□ 1.34
PTPRO-209ENST00000543886 KIF1BO60333 1816 aa23.43■■□□□ 1.34
PTPRO-209ENST00000543886 MRS2Q9HD23 443 aa23.43■■□□□ 1.34
PTPRO-209ENST00000543886 UGGT1Q9NYU2 1555 aa23.42■■□□□ 1.34
PTPRO-209ENST00000543886 DIP2CQ9Y2E4 1556 aa23.41■■□□□ 1.34
PTPRO-209ENST00000543886 CCDC184Q52MB2 194 aa23.41■■□□□ 1.34
PTPRO-209ENST00000543886 HNRNPUQ00839 825 aaKnown RBP eCLIP23.4■■□□□ 1.34
PTPRO-209ENST00000543886 MYT1Q01538 1121 aa23.4■■□□□ 1.34
PTPRO-209ENST00000543886 GGT6Q6P531 493 aa23.4■■□□□ 1.34
PTPRO-209ENST00000543886 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
PTPRO-209ENST00000543886 IQGAP1P46940 1657 aa23.38■■□□□ 1.33
PTPRO-209ENST00000543886 DIP2BQ9P265 1576 aa23.37■■□□□ 1.33
PTPRO-209ENST00000543886 ABCC3O15438 1527 aa23.37■■□□□ 1.33
PTPRO-209ENST00000543886 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
PTPRO-209ENST00000543886 TESK2Q96S53 571 aa23.36■■□□□ 1.33
PTPRO-209ENST00000543886 MYOM2P54296 1465 aa23.35■■□□□ 1.33
PTPRO-209ENST00000543886 NPATQ14207 1427 aa23.35■■□□□ 1.33
PTPRO-209ENST00000543886 MROH2AA6NES4 1674 aa23.35■■□□□ 1.33
PTPRO-209ENST00000543886 WASHC2CQ9Y4E1 1318 aa23.34■■□□□ 1.33
PTPRO-209ENST00000543886 CAMSAP1Q5T5Y3 1602 aa23.34■■□□□ 1.33
PTPRO-209ENST00000543886 FAM69CQ0P6D2 419 aa23.34■■□□□ 1.33
PTPRO-209ENST00000543886 CNGB1Q14028 1251 aaPredicted RBP23.34■■□□□ 1.33
PTPRO-209ENST00000543886 IFT172Q9UG01 1749 aa23.34■■□□□ 1.33
PTPRO-209ENST00000543886 TMF1P82094 1093 aa23.33■■□□□ 1.33
PTPRO-209ENST00000543886 FAM9BQ8IZU0 186 aa23.33■■□□□ 1.33
PTPRO-209ENST00000543886 DISP3Q9P2K9 1392 aa23.33■■□□□ 1.32
PTPRO-209ENST00000543886 SUPT16HQ9Y5B9 1047 aaKnown RBP23.32■■□□□ 1.32
PTPRO-209ENST00000543886 SCAF11Q99590 1463 aaKnown RBP23.32■■□□□ 1.32
PTPRO-209ENST00000543886 ADGRB3O60242 1522 aa23.31■■□□□ 1.32
PTPRO-209ENST00000543886 KTN1Q86UP2 1357 aaKnown RBP23.3■■□□□ 1.32
PTPRO-209ENST00000543886 YEATS2Q9ULM3 1422 aa23.29■■□□□ 1.32
PTPRO-209ENST00000543886 ZC3H13Q5T200 1668 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms