RNA–Protein interactions for RNA: ENST00000543824.5

PHC1-212, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-212ENST00000543824 DDX49Q9Y6V7 483 aaKnown RBP22.95■■□□□ 1.26
PHC1-212ENST00000543824 AMER1Q5JTC6 1135 aaPredicted RBP22.95■■□□□ 1.26
PHC1-212ENST00000543824 PKNOX2Q96KN3 472 aa22.95■■□□□ 1.26
PHC1-212ENST00000543824 CHMP5Q9NZZ3 219 aa22.94■■□□□ 1.26
PHC1-212ENST00000543824 PANK1Q8TE04 598 aa22.94■■□□□ 1.26
PHC1-212ENST00000543824 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
PHC1-212ENST00000543824 PTMSP20962 102 aa22.92■■□□□ 1.26
PHC1-212ENST00000543824 CHMP4BQ9H444 224 aaKnown RBP22.92■■□□□ 1.26
PHC1-212ENST00000543824 HFM1A2PYH4 1435 aa22.92■■□□□ 1.26
PHC1-212ENST00000543824 IPO8O15397 1037 aaKnown RBP22.91■■□□□ 1.26
PHC1-212ENST00000543824 POGKQ9P215 609 aa22.91■■□□□ 1.26
PHC1-212ENST00000543824 FAM13BQ9NYF5 915 aa22.91■■□□□ 1.26
PHC1-212ENST00000543824 NCOA2Q15596 1464 aa22.9■■□□□ 1.26
PHC1-212ENST00000543824 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
PHC1-212ENST00000543824 TIAM1Q13009 1591 aa22.89■■□□□ 1.25
PHC1-212ENST00000543824 CHAF1AQ13111 956 aaPredicted RBP22.88■■□□□ 1.25
PHC1-212ENST00000543824 FOXD4L5Q5VV16 416 aaPredicted RBP22.88■■□□□ 1.25
PHC1-212ENST00000543824 FOXD4L4Q8WXT5 416 aaPredicted RBP22.88■■□□□ 1.25
PHC1-212ENST00000543824 MAPKBP1O60336 1514 aa22.88■■□□□ 1.25
PHC1-212ENST00000543824 TRAK2O60296 914 aa22.87■■□□□ 1.25
PHC1-212ENST00000543824 KIAA2012Q0VF49 1180 aa22.87■■□□□ 1.25
PHC1-212ENST00000543824 CASKIN1Q8WXD9 1431 aa22.86■■□□□ 1.25
PHC1-212ENST00000543824 C20orf194Q5TEA3 1177 aa22.85■■□□□ 1.25
PHC1-212ENST00000543824 CFTRP13569 1480 aa22.85■■□□□ 1.25
PHC1-212ENST00000543824 MRE11P49959 708 aa22.85■■□□□ 1.25
PHC1-212ENST00000543824 C22orf23Q9BZE7 217 aa22.84■■□□□ 1.25
PHC1-212ENST00000543824 CDK11BP21127 795 aaKnown RBP22.84■■□□□ 1.25
PHC1-212ENST00000543824 NAIPQ13075 1403 aa22.83■■□□□ 1.25
PHC1-212ENST00000543824 BCAR3O75815 825 aa22.83■■□□□ 1.25
PHC1-212ENST00000543824 CCDC144AA2RUR9 1427 aa22.82■■□□□ 1.24
PHC1-212ENST00000543824 SKOR2Q2VWA4 1001 aaPredicted RBP22.8■■□□□ 1.24
PHC1-212ENST00000543824 FGD5Q6ZNL6 1462 aa22.8■■□□□ 1.24
PHC1-212ENST00000543824 NOL8Q76FK4 1167 aaKnown RBP22.8■■□□□ 1.24
PHC1-212ENST00000543824 SRPK2P78362 688 aaKnown RBP22.8■■□□□ 1.24
PHC1-212ENST00000543824 ZKSCAN2Q63HK3 967 aa22.8■■□□□ 1.24
PHC1-212ENST00000543824 ANKRD45Q5TZF3 282 aa22.79■■□□□ 1.24
PHC1-212ENST00000543824 NBPF1Q3BBV0 1214 aa22.77■■□□□ 1.23
PHC1-212ENST00000543824 FOXD4L6Q3SYB3 417 aaPredicted RBP22.77■■□□□ 1.23
PHC1-212ENST00000543824 FOXD4L3Q6VB84 417 aaPredicted RBP22.77■■□□□ 1.23
PHC1-212ENST00000543824 DRC7Q8IY82 874 aa22.75■■□□□ 1.23
PHC1-212ENST00000543824 UBE2Q2Q8WVN8 375 aa22.75■■□□□ 1.23
PHC1-212ENST00000543824 CUX1P39880 1505 aa22.75■■□□□ 1.23
PHC1-212ENST00000543824 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
PHC1-212ENST00000543824 LNPKQ9C0E8 428 aa22.73■■□□□ 1.23
PHC1-212ENST00000543824 FYCO1Q9BQS8 1478 aa22.73■■□□□ 1.23
PHC1-212ENST00000543824 ELL2O00472 640 aaPredicted RBP22.73■■□□□ 1.23
PHC1-212ENST00000543824 PDZRN3Q9UPQ7 1066 aa22.73■■□□□ 1.23
PHC1-212ENST00000543824 GOLGA6L4A6NEF3 574 aa22.72■■□□□ 1.23
PHC1-212ENST00000543824 MCCP23508 829 aa22.72■■□□□ 1.23
PHC1-212ENST00000543824 NCOA1Q15788 1441 aa22.72■■□□□ 1.23
PHC1-212ENST00000543824 DZIP1LQ8IYY4 767 aaKnown RBP22.72■■□□□ 1.23
PHC1-212ENST00000543824 R3HCC1Q9Y3T6 440 aaKnown RBP22.72■■□□□ 1.23
PHC1-212ENST00000543824 STK26Q9P289 416 aa22.71■■□□□ 1.23
PHC1-212ENST00000543824 TOP2BQ02880 1626 aa22.7■■□□□ 1.23
PHC1-212ENST00000543824 ZRSR1Q15695 479 aaKnown RBP22.7■■□□□ 1.22
PHC1-212ENST00000543824 PPP2R1AP30153 589 aa22.7■■□□□ 1.22
PHC1-212ENST00000543824 RBM10P98175 930 aaKnown RBP22.7■■□□□ 1.22
PHC1-212ENST00000543824 SYAP1Q96A49 352 aaPredicted RBP22.7■■□□□ 1.22
PHC1-212ENST00000543824 CFAP44Q96MT7 982 aa22.7■■□□□ 1.22
PHC1-212ENST00000543824 MCM4P33991 863 aa22.7■■□□□ 1.22
PHC1-212ENST00000543824 NASPP49321 788 aaPredicted RBP22.7■■□□□ 1.22
PHC1-212ENST00000543824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.68■■□□□ 1.22
PHC1-212ENST00000543824 ESPNB1AK53 854 aa22.68■■□□□ 1.22
PHC1-212ENST00000543824 KCNJ4P48050 445 aa22.68■■□□□ 1.22
PHC1-212ENST00000543824 MIA2Q96PC5 1412 aa22.67■■□□□ 1.22
PHC1-212ENST00000543824 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.67■■□□□ 1.22
PHC1-212ENST00000543824 TRAK1Q9UPV9 953 aa22.67■■□□□ 1.22
PHC1-212ENST00000543824 ST18O60284 1047 aa22.67■■□□□ 1.22
PHC1-212ENST00000543824 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
PHC1-212ENST00000543824 GRPEL1Q9HAV7 217 aa22.66■■□□□ 1.22
PHC1-212ENST00000543824 EIF3AQ14152 1382 aaKnown RBP22.65■■□□□ 1.22
PHC1-212ENST00000543824 MCTP1Q6DN14 999 aa22.65■■□□□ 1.22
PHC1-212ENST00000543824 DDX19BQ9UMR2 479 aa22.64■■□□□ 1.22
PHC1-212ENST00000543824 PLEKHG5O94827 1062 aa22.64■■□□□ 1.21
PHC1-212ENST00000543824 ESF1Q9H501 851 aaKnown RBP22.63■■□□□ 1.21
PHC1-212ENST00000543824 ANKRD50Q9ULJ7 1429 aa22.63■■□□□ 1.21
PHC1-212ENST00000543824 PDE3AQ14432 1141 aa22.62■■□□□ 1.21
PHC1-212ENST00000543824 TAOK2Q9UL54 1235 aa22.62■■□□□ 1.21
PHC1-212ENST00000543824 SOX12O15370 315 aa22.62■■□□□ 1.21
PHC1-212ENST00000543824 PLPPR3Q6T4P5 718 aa22.62■■□□□ 1.21
PHC1-212ENST00000543824 RRP9O43818 475 aaKnown RBP22.62■■□□□ 1.21
PHC1-212ENST00000543824 OS9Q13438 667 aaPredicted RBP22.61■■□□□ 1.21
PHC1-212ENST00000543824 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
PHC1-212ENST00000543824 KANK1Q14678 1352 aa22.6■■□□□ 1.21
PHC1-212ENST00000543824 RNF214Q8ND24 703 aa22.6■■□□□ 1.21
PHC1-212ENST00000543824 NGEFQ8N5V2 710 aa22.59■■□□□ 1.21
PHC1-212ENST00000543824 ANKRD30BQ9BXX2 1392 aa22.59■■□□□ 1.21
PHC1-212ENST00000543824 TRIM6-TRIM34B2RNG4 842 aa22.59■■□□□ 1.21
PHC1-212ENST00000543824 KIAA1211Q6ZU35 1233 aa22.58■■□□□ 1.21
PHC1-212ENST00000543824 TCP11L2Q8N4U5 519 aa22.58■■□□□ 1.21
PHC1-212ENST00000543824 RUNDC1Q96C34 613 aa22.58■■□□□ 1.21
PHC1-212ENST00000543824 TPM2P07951 284 aa22.58■■□□□ 1.2
PHC1-212ENST00000543824 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.2
PHC1-212ENST00000543824 CAVIN1Q6NZI2 390 aaKnown RBP22.58■■□□□ 1.2
PHC1-212ENST00000543824 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
PHC1-212ENST00000543824 FGD1P98174 961 aa22.57■■□□□ 1.2
PHC1-212ENST00000543824 GGT6Q6P531 493 aa22.57■■□□□ 1.2
PHC1-212ENST00000543824 KIF3BO15066 747 aa22.56■■□□□ 1.2
PHC1-212ENST00000543824 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
PHC1-212ENST00000543824 KIAA1107Q9UPP5 1409 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms