RNA–Protein interactions for RNA: ENST00000543702.1

SMG1P4-206, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 501 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-206ENST00000543702 FECHP22830 423 aa13.31□□□□□ -0.28
SMG1P4-206ENST00000543702 MAP2K5Q13163 448 aa13.31□□□□□ -0.28
SMG1P4-206ENST00000543702 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
SMG1P4-206ENST00000543702 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
SMG1P4-206ENST00000543702 C6orf132Q5T0Z8 1188 aa13.28□□□□□ -0.28
SMG1P4-206ENST00000543702 IRF6O14896 467 aa13.27□□□□□ -0.29
SMG1P4-206ENST00000543702 TRIM66O15016 1216 aa13.27□□□□□ -0.29
SMG1P4-206ENST00000543702 NPDC1Q9NQX5 325 aaPredicted RBP13.27□□□□□ -0.29
SMG1P4-206ENST00000543702 PSDA5PKW4 1024 aaPredicted RBP13.26□□□□□ -0.29
SMG1P4-206ENST00000543702 CCDC102AQ96A19 550 aa13.26□□□□□ -0.29
SMG1P4-206ENST00000543702 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
SMG1P4-206ENST00000543702 PDE4DQ08499 809 aa13.23□□□□□ -0.29
SMG1P4-206ENST00000543702 CERKQ8TCT0 537 aa13.23□□□□□ -0.29
SMG1P4-206ENST00000543702 GPBP1L1Q9HC44 474 aaPredicted RBP13.2□□□□□ -0.3
SMG1P4-206ENST00000543702 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
SMG1P4-206ENST00000543702 PTPREP23469 700 aa13.16□□□□□ -0.3
SMG1P4-206ENST00000543702 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
SMG1P4-206ENST00000543702 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
SMG1P4-206ENST00000543702 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
SMG1P4-206ENST00000543702 ERBB3P21860 1342 aa13.13□□□□□ -0.31
SMG1P4-206ENST00000543702 TTLL12Q14166 644 aaPredicted RBP13.13□□□□□ -0.31
SMG1P4-206ENST00000543702 COL9A1P20849 921 aa13.12□□□□□ -0.31
SMG1P4-206ENST00000543702 PRSS12P56730 875 aa13.12□□□□□ -0.31
SMG1P4-206ENST00000543702 AMHR2Q16671 573 aa13.12□□□□□ -0.31
SMG1P4-206ENST00000543702 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
SMG1P4-206ENST00000543702 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
SMG1P4-206ENST00000543702 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
SMG1P4-206ENST00000543702 ST18O60284 1047 aa13.11□□□□□ -0.31
SMG1P4-206ENST00000543702 RBM27Q9P2N5 1060 aaKnown RBP13.11□□□□□ -0.31
SMG1P4-206ENST00000543702 PPP1R3GB7ZBB8 358 aa13.1□□□□□ -0.31
SMG1P4-206ENST00000543702 OATP04181 439 aa13.09□□□□□ -0.31
SMG1P4-206ENST00000543702 EMP3P54852 163 aa13.09□□□□□ -0.31
SMG1P4-206ENST00000543702 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
SMG1P4-206ENST00000543702 FAM163AQ96GL9 167 aaPredicted RBP13.09□□□□□ -0.31
SMG1P4-206ENST00000543702 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
SMG1P4-206ENST00000543702 PARP9Q8IXQ6 854 aa13.08□□□□□ -0.32
SMG1P4-206ENST00000543702 IL27Q8NEV9 243 aa13.08□□□□□ -0.32
SMG1P4-206ENST00000543702 MARVELD3Q96A59 401 aa13.07□□□□□ -0.32
SMG1P4-206ENST00000543702 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
SMG1P4-206ENST00000543702 ADGRG1Q9Y653 693 aa13.06□□□□□ -0.32
SMG1P4-206ENST00000543702 METTL3Q86U44 580 aaKnown RBP13.05□□□□□ -0.32
SMG1P4-206ENST00000543702 DAXXQ9UER7 740 aaPredicted RBP13.05□□□□□ -0.32
SMG1P4-206ENST00000543702 MDM2Q00987 491 aaPredicted RBP13.04□□□□□ -0.32
SMG1P4-206ENST00000543702 RBM46Q8TBY0 533 aaKnown RBP13.04□□□□□ -0.32
SMG1P4-206ENST00000543702 CLCN1P35523 988 aa13.03□□□□□ -0.32
SMG1P4-206ENST00000543702 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
SMG1P4-206ENST00000543702 FAM205CA6NFA0 338 aa13.02□□□□□ -0.33
SMG1P4-206ENST00000543702 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
SMG1P4-206ENST00000543702 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.33
SMG1P4-206ENST00000543702 TSKSQ9UJT2 592 aa13.02□□□□□ -0.33
SMG1P4-206ENST00000543702 PSEN2P49810 448 aa13.01□□□□□ -0.33
SMG1P4-206ENST00000543702 PACS2Q86VP3 889 aa13.01□□□□□ -0.33
SMG1P4-206ENST00000543702 NLRP7Q8WX94 980 aa13.01□□□□□ -0.33
SMG1P4-206ENST00000543702 FAM198AQ9UFP1 575 aa13.01□□□□□ -0.33
SMG1P4-206ENST00000543702 TRIM6-TRIM34B2RNG4 842 aa13□□□□□ -0.33
SMG1P4-206ENST00000543702 FAM117AQ9C073 453 aa13□□□□□ -0.33
SMG1P4-206ENST00000543702 GPCPD1Q9NPB8 672 aa13□□□□□ -0.33
SMG1P4-206ENST00000543702 GTF3C3Q9Y5Q9 886 aa13□□□□□ -0.33
SMG1P4-206ENST00000543702 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
SMG1P4-206ENST00000543702 PROX2Q3B8N5 592 aa12.99□□□□□ -0.33
SMG1P4-206ENST00000543702 NBPF26B4DH59 902 aa12.98□□□□□ -0.33
SMG1P4-206ENST00000543702 NUDT18Q6ZVK8 323 aa12.98□□□□□ -0.33
SMG1P4-206ENST00000543702 REPIN1Q9BWE0 567 aaKnown RBP12.98□□□□□ -0.33
SMG1P4-206ENST00000543702 PNMA3Q9UL41 463 aa12.98□□□□□ -0.33
SMG1P4-206ENST00000543702 AXIN2Q9Y2T1 843 aa12.98□□□□□ -0.33
SMG1P4-206ENST00000543702 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
SMG1P4-206ENST00000543702 TATDN2Q93075 761 aa12.95□□□□□ -0.34
SMG1P4-206ENST00000543702 MS4A1P11836 297 aa12.94□□□□□ -0.34
SMG1P4-206ENST00000543702 EYA1Q99502 592 aa12.94□□□□□ -0.34
SMG1P4-206ENST00000543702 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
SMG1P4-206ENST00000543702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.93□□□□□ -0.34
SMG1P4-206ENST00000543702 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
SMG1P4-206ENST00000543702 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
SMG1P4-206ENST00000543702 ZNF687Q8N1G0 1237 aa12.93□□□□□ -0.34
SMG1P4-206ENST00000543702 TMUB1Q9BVT8 246 aa12.93□□□□□ -0.34
SMG1P4-206ENST00000543702 KIAA1468Q9P260 1216 aa12.93□□□□□ -0.34
SMG1P4-206ENST00000543702 C3orf80F5H4A9 247 aa12.92□□□□□ -0.34
SMG1P4-206ENST00000543702 SMAPO00193 183 aa12.92□□□□□ -0.34
SMG1P4-206ENST00000543702 ONECUT3O60422 494 aaPredicted RBP12.92□□□□□ -0.34
SMG1P4-206ENST00000543702 PBX2P40425 430 aa12.92□□□□□ -0.34
SMG1P4-206ENST00000543702 POTEEQ6S8J3 1075 aa12.92□□□□□ -0.34
SMG1P4-206ENST00000543702 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
SMG1P4-206ENST00000543702 DMRTA1Q5VZB9 504 aa12.91□□□□□ -0.34
SMG1P4-206ENST00000543702 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
SMG1P4-206ENST00000543702 DNAJB2P25686 324 aa12.89□□□□□ -0.35
SMG1P4-206ENST00000543702 FAM217BQ9NTX9 383 aaPredicted RBP12.89□□□□□ -0.35
SMG1P4-206ENST00000543702 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
SMG1P4-206ENST00000543702 BEGAINQ9BUH8 593 aa12.86□□□□□ -0.35
SMG1P4-206ENST00000543702 SLC4A5Q9BY07 1137 aa12.86□□□□□ -0.35
SMG1P4-206ENST00000543702 POTEB3A0JP26 581 aa12.85□□□□□ -0.35
SMG1P4-206ENST00000543702 POTEBQ6S5H4 581 aa12.85□□□□□ -0.35
SMG1P4-206ENST00000543702 SEPT9Q9UHD8 586 aaPredicted RBP12.84□□□□□ -0.35
SMG1P4-206ENST00000543702 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
SMG1P4-206ENST00000543702 TMEM134Q9H6X4 195 aa12.83□□□□□ -0.36
SMG1P4-206ENST00000543702 VPS9D1Q9Y2B5 631 aa12.83□□□□□ -0.36
SMG1P4-206ENST00000543702 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
SMG1P4-206ENST00000543702 SULF1Q8IWU6 871 aa12.82□□□□□ -0.36
SMG1P4-206ENST00000543702 HDGFP51858 240 aaKnown RBP12.81□□□□□ -0.36
SMG1P4-206ENST00000543702 ATP1B4Q9UN42 357 aaPredicted RBP12.81□□□□□ -0.36
SMG1P4-206ENST00000543702 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms