RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 SPDYE16A6NNV3 312 aaPredicted RBP8.27□□□□□ -1.09
MRPL48-211ENST00000543058 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
MRPL48-211ENST00000543058 RABGEF1Q9UJ41 708 aa8.27□□□□□ -1.09
MRPL48-211ENST00000543058 THSD4Q6ZMP0 1018 aa8.26□□□□□ -1.09
MRPL48-211ENST00000543058 PAXIP1Q6ZW49 1069 aaPredicted RBP8.26□□□□□ -1.09
MRPL48-211ENST00000543058 STAC3Q96MF2 364 aa8.26□□□□□ -1.09
MRPL48-211ENST00000543058 NBPF3Q9H094 633 aa8.26□□□□□ -1.09
MRPL48-211ENST00000543058 E2F4Q16254 413 aa8.25□□□□□ -1.09
MRPL48-211ENST00000543058 C6orf132Q5T0Z8 1188 aa8.25□□□□□ -1.09
MRPL48-211ENST00000543058 PLA2G2EQ9NZK7 142 aa8.25□□□□□ -1.09
MRPL48-211ENST00000543058 PLCB2Q00722 1185 aa8.24□□□□□ -1.09
MRPL48-211ENST00000543058 IFFO2Q5TF58 517 aa8.24□□□□□ -1.09
MRPL48-211ENST00000543058 LAPTM4BQ86VI4 370 aa8.24□□□□□ -1.09
MRPL48-211ENST00000543058 MRPL50Q8N5N7 158 aaKnown RBP8.24□□□□□ -1.09
MRPL48-211ENST00000543058 PROX2Q3B8N5 592 aa8.23□□□□□ -1.09
MRPL48-211ENST00000543058 EN1Q05925 392 aaPredicted RBP8.22□□□□□ -1.09
MRPL48-211ENST00000543058 CFAP44Q96MT7 982 aa8.22□□□□□ -1.09
MRPL48-211ENST00000543058 DDX12PQ92771 950 aa8.21□□□□□ -1.1
MRPL48-211ENST00000543058 WNT2BQ93097 391 aa8.2□□□□□ -1.1
MRPL48-211ENST00000543058 TRIM6-TRIM34B2RNG4 842 aa8.19□□□□□ -1.1
MRPL48-211ENST00000543058 KIAA1468Q9P260 1216 aa8.18□□□□□ -1.1
MRPL48-211ENST00000543058 GOLGA8CPA6NN73 597 aa8.17□□□□□ -1.1
MRPL48-211ENST00000543058 NBR1Q14596 966 aa8.17□□□□□ -1.1
MRPL48-211ENST00000543058 WDR70Q9NW82 654 aa8.17□□□□□ -1.1
MRPL48-211ENST00000543058 PRIM1P49642 420 aaKnown RBP8.16□□□□□ -1.1
MRPL48-211ENST00000543058 SOWAHBA6NEL2 793 aa8.15□□□□□ -1.1
MRPL48-211ENST00000543058 PTPN5P54829 565 aa8.15□□□□□ -1.1
MRPL48-211ENST00000543058 TSR1Q2NL82 804 aaKnown RBP8.15□□□□□ -1.1
MRPL48-211ENST00000543058 ANKK1Q8NFD2 765 aa8.15□□□□□ -1.1
MRPL48-211ENST00000543058 CERKQ8TCT0 537 aa8.15□□□□□ -1.1
MRPL48-211ENST00000543058 RBM33Q96EV2 1170 aaKnown RBP8.15□□□□□ -1.1
MRPL48-211ENST00000543058 FAM98CQ17RN3 349 aaKnown RBP8.14□□□□□ -1.11
MRPL48-211ENST00000543058 NYAP1Q6ZVC0 841 aa8.14□□□□□ -1.11
MRPL48-211ENST00000543058 ZFRQ96KR1 1074 aaKnown RBP8.14□□□□□ -1.11
MRPL48-211ENST00000543058 MAP3K7O43318 606 aa8.13□□□□□ -1.11
MRPL48-211ENST00000543058 OSBPP22059 807 aa8.13□□□□□ -1.11
MRPL48-211ENST00000543058 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
MRPL48-211ENST00000543058 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
MRPL48-211ENST00000543058 RGS20O76081 388 aa8.11□□□□□ -1.11
MRPL48-211ENST00000543058 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
MRPL48-211ENST00000543058 PRSS12P56730 875 aa8.1□□□□□ -1.11
MRPL48-211ENST00000543058 PACS2Q86VP3 889 aa8.1□□□□□ -1.11
MRPL48-211ENST00000543058 ARHGEF1Q92888 912 aaKnown RBP8.1□□□□□ -1.11
MRPL48-211ENST00000543058 TSHZ2Q9NRE2 1034 aa8.1□□□□□ -1.11
MRPL48-211ENST00000543058 BCAMP50895 628 aa8.09□□□□□ -1.11
MRPL48-211ENST00000543058 TTC13Q8NBP0 860 aa8.09□□□□□ -1.11
MRPL48-211ENST00000543058 CDCA7LQ96GN5 454 aa8.09□□□□□ -1.11
MRPL48-211ENST00000543058 FAM198AQ9UFP1 575 aa8.09□□□□□ -1.11
MRPL48-211ENST00000543058 SEPT9Q9UHD8 586 aaPredicted RBP8.09□□□□□ -1.11
MRPL48-211ENST00000543058 A0A0G2JS52 829 aa8.07□□□□□ -1.12
MRPL48-211ENST00000543058 GRXCR2A6NFK2 248 aa8.07□□□□□ -1.12
MRPL48-211ENST00000543058 KCNV2Q8TDN2 545 aa8.06□□□□□ -1.12
MRPL48-211ENST00000543058 NPDC1Q9NQX5 325 aaPredicted RBP8.06□□□□□ -1.12
MRPL48-211ENST00000543058 WBP1LQ9NX94 342 aa8.06□□□□□ -1.12
MRPL48-211ENST00000543058 CDHR5Q9HBB8 845 aa8.05□□□□□ -1.12
MRPL48-211ENST00000543058 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
MRPL48-211ENST00000543058 TSR3Q9UJK0 312 aaKnown RBP8.05□□□□□ -1.12
MRPL48-211ENST00000543058 C3orf80F5H4A9 247 aa8.04□□□□□ -1.12
MRPL48-211ENST00000543058 HAP1P54257 671 aaPredicted RBP8.04□□□□□ -1.12
MRPL48-211ENST00000543058 LRCH3Q96II8 777 aa8.04□□□□□ -1.12
MRPL48-211ENST00000543058 NBPF26B4DH59 902 aa8.03□□□□□ -1.12
MRPL48-211ENST00000543058 TATDN2Q93075 761 aa8.03□□□□□ -1.12
MRPL48-211ENST00000543058 VSIG10Q8N0Z9 540 aa8.01□□□□□ -1.13
MRPL48-211ENST00000543058 HPS5Q9UPZ3 1129 aa8.01□□□□□ -1.13
MRPL48-211ENST00000543058 MLLT3P42568 568 aaPredicted RBP7.99□□□□□ -1.13
MRPL48-211ENST00000543058 SAMD7Q7Z3H4 446 aa7.99□□□□□ -1.13
MRPL48-211ENST00000543058 P3H3Q8IVL6 736 aa7.99□□□□□ -1.13
MRPL48-211ENST00000543058 SMAPO00193 183 aa7.98□□□□□ -1.13
MRPL48-211ENST00000543058 PNMA3Q9UL41 463 aa7.98□□□□□ -1.13
MRPL48-211ENST00000543058 KCNC4Q03721 635 aa7.97□□□□□ -1.13
MRPL48-211ENST00000543058 PADI6Q6TGC4 694 aa7.97□□□□□ -1.13
MRPL48-211ENST00000543058 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
MRPL48-211ENST00000543058 PTGDRQ13258 359 aa7.96□□□□□ -1.14
MRPL48-211ENST00000543058 EYA1Q99502 592 aa7.96□□□□□ -1.14
MRPL48-211ENST00000543058 PPP4CP60510 307 aa7.95□□□□□ -1.14
MRPL48-211ENST00000543058 TJAP1Q5JTD0 557 aa7.95□□□□□ -1.14
MRPL48-211ENST00000543058 NECTIN2Q92692 538 aa7.93□□□□□ -1.14
MRPL48-211ENST00000543058 BCANQ96GW7 911 aa7.92□□□□□ -1.14
MRPL48-211ENST00000543058 KDM2AQ9Y2K7 1162 aa7.9□□□□□ -1.14
MRPL48-211ENST00000543058 SEMA3EO15041 775 aa7.89□□□□□ -1.15
MRPL48-211ENST00000543058 APLP1P51693 650 aa7.89□□□□□ -1.15
MRPL48-211ENST00000543058 HDGFP51858 240 aaKnown RBP7.89□□□□□ -1.15
MRPL48-211ENST00000543058 SWT1Q5T5J6 900 aaKnown RBP7.89□□□□□ -1.15
MRPL48-211ENST00000543058 SLF2Q8IX21 1173 aa7.89□□□□□ -1.15
MRPL48-211ENST00000543058 MTRQ99707 1265 aa7.89□□□□□ -1.15
MRPL48-211ENST00000543058 IL21Q9HBE4 155 aa7.89□□□□□ -1.15
MRPL48-211ENST00000543058 ADGRG1Q9Y653 693 aa7.89□□□□□ -1.15
MRPL48-211ENST00000543058 TESPA1A2RU30 521 aaPredicted RBP7.88□□□□□ -1.15
MRPL48-211ENST00000543058 FCHSD2O94868 740 aa7.86□□□□□ -1.15
MRPL48-211ENST00000543058 DNAJB2P25686 324 aa7.86□□□□□ -1.15
MRPL48-211ENST00000543058 TMEM134Q9H6X4 195 aa7.86□□□□□ -1.15
MRPL48-211ENST00000543058 RBM46Q8TBY0 533 aaKnown RBP7.85□□□□□ -1.15
MRPL48-211ENST00000543058 IRX2Q9BZI1 471 aaPredicted RBP7.85□□□□□ -1.15
MRPL48-211ENST00000543058 PRR14Q9BWN1 585 aa7.84□□□□□ -1.15
MRPL48-211ENST00000543058 GPR37O15354 613 aa7.83□□□□□ -1.16
MRPL48-211ENST00000543058 HIC1Q14526 733 aa7.83□□□□□ -1.16
MRPL48-211ENST00000543058 NUTM2FA1L443 756 aa7.82□□□□□ -1.16
MRPL48-211ENST00000543058 SLC4A3P48751 1232 aa7.82□□□□□ -1.16
MRPL48-211ENST00000543058 ZNF516Q92618 1163 aa7.82□□□□□ -1.16
MRPL48-211ENST00000543058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms