RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 MAP3K9P80192 1104 aa10.41□□□□□ -0.74
GTF2H3-210ENST00000543005 FBXW7Q969H0 707 aa10.41□□□□□ -0.74
GTF2H3-210ENST00000543005 BCAMP50895 628 aa10.4□□□□□ -0.74
GTF2H3-210ENST00000543005 PHF14O94880 888 aa10.39□□□□□ -0.75
GTF2H3-210ENST00000543005 Q6ZNB5 142 aa10.39□□□□□ -0.75
GTF2H3-210ENST00000543005 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
GTF2H3-210ENST00000543005 EMILIN3Q9NT22 766 aa10.39□□□□□ -0.75
GTF2H3-210ENST00000543005 TYW1BQ6NUM6 668 aa10.38□□□□□ -0.75
GTF2H3-210ENST00000543005 ZFRQ96KR1 1074 aaKnown RBP10.38□□□□□ -0.75
GTF2H3-210ENST00000543005 KCNC4Q03721 635 aa10.37□□□□□ -0.75
GTF2H3-210ENST00000543005 LAPTM4AQ15012 233 aa10.36□□□□□ -0.75
GTF2H3-210ENST00000543005 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
GTF2H3-210ENST00000543005 KIAA1468Q9P260 1216 aa10.36□□□□□ -0.75
GTF2H3-210ENST00000543005 GTPBP6O43824 516 aaPredicted RBP10.34□□□□□ -0.75
GTF2H3-210ENST00000543005 FAM98CQ17RN3 349 aaKnown RBP10.3□□□□□ -0.76
GTF2H3-210ENST00000543005 C6orf132Q5T0Z8 1188 aa10.3□□□□□ -0.76
GTF2H3-210ENST00000543005 EPAS1Q99814 870 aa10.3□□□□□ -0.76
GTF2H3-210ENST00000543005 TSR3Q9UJK0 312 aaKnown RBP10.3□□□□□ -0.76
GTF2H3-210ENST00000543005 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
GTF2H3-210ENST00000543005 LCE2BO14633 110 aa10.29□□□□□ -0.76
GTF2H3-210ENST00000543005 SEPT9Q9UHD8 586 aaPredicted RBP10.28□□□□□ -0.76
GTF2H3-210ENST00000543005 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.26□□□□□ -0.77
GTF2H3-210ENST00000543005 CAMK2BQ13554 666 aa10.25□□□□□ -0.77
GTF2H3-210ENST00000543005 LRCH3Q96II8 777 aa10.25□□□□□ -0.77
GTF2H3-210ENST00000543005 TRAF7Q6Q0C0 670 aa10.24□□□□□ -0.77
GTF2H3-210ENST00000543005 HPS5Q9UPZ3 1129 aa10.24□□□□□ -0.77
GTF2H3-210ENST00000543005 GFRA3O60609 400 aa10.22□□□□□ -0.77
GTF2H3-210ENST00000543005 TJAP1Q5JTD0 557 aa10.19□□□□□ -0.78
GTF2H3-210ENST00000543005 NRG2O14511 850 aaPredicted RBP10.18□□□□□ -0.78
GTF2H3-210ENST00000543005 CADPS2Q86UW7 1296 aa10.18□□□□□ -0.78
GTF2H3-210ENST00000543005 PACS2Q86VP3 889 aa10.16□□□□□ -0.78
GTF2H3-210ENST00000543005 TSKSQ9UJT2 592 aa10.16□□□□□ -0.78
GTF2H3-210ENST00000543005 V9GY48 417 aaPredicted RBP10.16□□□□□ -0.78
GTF2H3-210ENST00000543005 DPYSL4O14531 572 aa10.15□□□□□ -0.78
GTF2H3-210ENST00000543005 PPP4CP60510 307 aa10.15□□□□□ -0.78
GTF2H3-210ENST00000543005 PRKD2Q9BZL6 878 aa10.15□□□□□ -0.78
GTF2H3-210ENST00000543005 RBM33Q96EV2 1170 aaKnown RBP10.14□□□□□ -0.79
GTF2H3-210ENST00000543005 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
GTF2H3-210ENST00000543005 DDX12PQ92771 950 aa10.11□□□□□ -0.79
GTF2H3-210ENST00000543005 IL21Q9HBE4 155 aa10.11□□□□□ -0.79
GTF2H3-210ENST00000543005 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
GTF2H3-210ENST00000543005 MTRQ99707 1265 aa10.1□□□□□ -0.79
GTF2H3-210ENST00000543005 TSR1Q2NL82 804 aaKnown RBP10.09□□□□□ -0.79
GTF2H3-210ENST00000543005 SAMD7Q7Z3H4 446 aa10.08□□□□□ -0.8
GTF2H3-210ENST00000543005 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
GTF2H3-210ENST00000543005 MAP3K7O43318 606 aa10.06□□□□□ -0.8
GTF2H3-210ENST00000543005 PRSS12P56730 875 aa10.06□□□□□ -0.8
GTF2H3-210ENST00000543005 NBR1Q14596 966 aa10.06□□□□□ -0.8
GTF2H3-210ENST00000543005 PDIA6Q15084 440 aa10.06□□□□□ -0.8
GTF2H3-210ENST00000543005 CERKQ8TCT0 537 aa10.06□□□□□ -0.8
GTF2H3-210ENST00000543005 CDCA7LQ96GN5 454 aa10.06□□□□□ -0.8
GTF2H3-210ENST00000543005 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
GTF2H3-210ENST00000543005 SMAPO00193 183 aa10.03□□□□□ -0.8
GTF2H3-210ENST00000543005 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.81
GTF2H3-210ENST00000543005 ZNF787Q6DD87 383 aa10.02□□□□□ -0.81
GTF2H3-210ENST00000543005 ZNF516Q92618 1163 aa10.02□□□□□ -0.81
GTF2H3-210ENST00000543005 TATDN2Q93075 761 aa10.02□□□□□ -0.81
GTF2H3-210ENST00000543005 NBPF26B4DH59 902 aa10.01□□□□□ -0.81
GTF2H3-210ENST00000543005 C3orf80F5H4A9 247 aa10.01□□□□□ -0.81
GTF2H3-210ENST00000543005 PDZRN3Q9UPQ7 1066 aa10.01□□□□□ -0.81
GTF2H3-210ENST00000543005 APLP1P51693 650 aa9.99□□□□□ -0.81
GTF2H3-210ENST00000543005 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
GTF2H3-210ENST00000543005 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
GTF2H3-210ENST00000543005 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
GTF2H3-210ENST00000543005 NECTIN2Q92692 538 aa9.97□□□□□ -0.81
GTF2H3-210ENST00000543005 ZNF775Q96BV0 537 aaPredicted RBP9.97□□□□□ -0.81
GTF2H3-210ENST00000543005 GGCXP38435 758 aa9.96□□□□□ -0.82
GTF2H3-210ENST00000543005 PRIM1P49642 420 aaKnown RBP9.96□□□□□ -0.82
GTF2H3-210ENST00000543005 NKX2-3Q8TAU0 364 aa9.96□□□□□ -0.82
GTF2H3-210ENST00000543005 HDGFP51858 240 aaKnown RBP9.95□□□□□ -0.82
GTF2H3-210ENST00000543005 ARIH1Q9Y4X5 557 aaPredicted RBP9.95□□□□□ -0.82
GTF2H3-210ENST00000543005 NUDT18Q6ZVK8 323 aa9.93□□□□□ -0.82
GTF2H3-210ENST00000543005 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
GTF2H3-210ENST00000543005 TRIM67Q6ZTA4 783 aa9.9□□□□□ -0.82
GTF2H3-210ENST00000543005 SLF2Q8IX21 1173 aa9.89□□□□□ -0.83
GTF2H3-210ENST00000543005 RNF40O75150 1001 aa9.88□□□□□ -0.83
GTF2H3-210ENST00000543005 ZPR1O75312 459 aa9.88□□□□□ -0.83
GTF2H3-210ENST00000543005 OSBPP22059 807 aa9.88□□□□□ -0.83
GTF2H3-210ENST00000543005 COPS2P61201 443 aa9.87□□□□□ -0.83
GTF2H3-210ENST00000543005 CDHR5Q9HBB8 845 aa9.87□□□□□ -0.83
GTF2H3-210ENST00000543005 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
GTF2H3-210ENST00000543005 GRXCR2A6NFK2 248 aa9.85□□□□□ -0.83
GTF2H3-210ENST00000543005 DGAT1O75907 488 aa9.85□□□□□ -0.83
GTF2H3-210ENST00000543005 PRR20EP86478 221 aa9.85□□□□□ -0.83
GTF2H3-210ENST00000543005 PRR20CP86479 221 aa9.85□□□□□ -0.83
GTF2H3-210ENST00000543005 PRR20DP86480 221 aa9.85□□□□□ -0.83
GTF2H3-210ENST00000543005 PRR20BP86481 221 aa9.85□□□□□ -0.83
GTF2H3-210ENST00000543005 PRR20AP86496 221 aa9.85□□□□□ -0.83
GTF2H3-210ENST00000543005 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
GTF2H3-210ENST00000543005 DCAF8L2P0C7V8 631 aa9.84□□□□□ -0.83
GTF2H3-210ENST00000543005 SLC19A1P41440 591 aa9.84□□□□□ -0.83
GTF2H3-210ENST00000543005 MYT1Q01538 1121 aa9.84□□□□□ -0.83
GTF2H3-210ENST00000543005 E2F4Q16254 413 aa9.84□□□□□ -0.83
GTF2H3-210ENST00000543005 PRR14Q9BWN1 585 aa9.84□□□□□ -0.83
GTF2H3-210ENST00000543005 RNF223E7ERA6 249 aa9.83□□□□□ -0.84
GTF2H3-210ENST00000543005 NPDC1Q9NQX5 325 aaPredicted RBP9.83□□□□□ -0.84
GTF2H3-210ENST00000543005 SPRYD7Q5W111 196 aa9.82□□□□□ -0.84
GTF2H3-210ENST00000543005 PKDCCQ504Y2 493 aa9.81□□□□□ -0.84
GTF2H3-210ENST00000543005 ZNF598Q86UK7 904 aaKnown RBP9.81□□□□□ -0.84
GTF2H3-210ENST00000543005 EYA1Q99502 592 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms