RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 ABCC1P33527 1531 aa7.7□□□□□ -1.18
ZEB1-209ENST00000542879 PRG4Q92954 1404 aaPredicted RBP7.7□□□□□ -1.18
ZEB1-209ENST00000542879 SALL2Q9Y467 1007 aaPredicted RBP7.7□□□□□ -1.18
ZEB1-209ENST00000542879 TTC37Q6PGP7 1564 aa7.7□□□□□ -1.18
ZEB1-209ENST00000542879 CAMSAP2Q08AD1 1489 aa7.7□□□□□ -1.18
ZEB1-209ENST00000542879 FOXD1Q16676 465 aa7.7□□□□□ -1.18
ZEB1-209ENST00000542879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.7□□□□□ -1.18
ZEB1-209ENST00000542879 KDM5DQ9BY66 1539 aa7.7□□□□□ -1.18
ZEB1-209ENST00000542879 MAGI2Q86UL8 1455 aa7.7□□□□□ -1.18
ZEB1-209ENST00000542879 MRS2Q9HD23 443 aa7.69□□□□□ -1.18
ZEB1-209ENST00000542879 SHANK2Q9UPX8 1470 aa7.69□□□□□ -1.18
ZEB1-209ENST00000542879 ADGRL2O95490 1459 aa7.69□□□□□ -1.18
ZEB1-209ENST00000542879 CCDC136Q96JN2 1154 aa7.69□□□□□ -1.18
ZEB1-209ENST00000542879 VWDEQ8N2E2 1590 aa7.68□□□□□ -1.18
ZEB1-209ENST00000542879 FAM9BQ8IZU0 186 aa7.68□□□□□ -1.18
ZEB1-209ENST00000542879 VIRMAQ69YN4 1812 aaKnown RBP7.68□□□□□ -1.18
ZEB1-209ENST00000542879 B4GALNT3Q6L9W6 998 aa7.68□□□□□ -1.18
ZEB1-209ENST00000542879 OSCARQ8IYS5 282 aa7.67□□□□□ -1.18
ZEB1-209ENST00000542879 MYT1LQ9UL68 1186 aa7.67□□□□□ -1.18
ZEB1-209ENST00000542879 UHRF1BP1Q6BDS2 1440 aa7.66□□□□□ -1.18
ZEB1-209ENST00000542879 KIAA1107Q9UPP5 1409 aa7.65□□□□□ -1.18
ZEB1-209ENST00000542879 ATP10BO94823 1461 aa7.65□□□□□ -1.18
ZEB1-209ENST00000542879 RALGAPBQ86X10 1494 aa7.65□□□□□ -1.18
ZEB1-209ENST00000542879 ARID4BQ4LE39 1312 aaPredicted RBP7.65□□□□□ -1.18
ZEB1-209ENST00000542879 FER1L4A9Z1Z3 1794 aa7.65□□□□□ -1.18
ZEB1-209ENST00000542879 SIGLEC1Q9BZZ2 1709 aa7.65□□□□□ -1.19
ZEB1-209ENST00000542879 NUDCQ9Y266 331 aa7.65□□□□□ -1.19
ZEB1-209ENST00000542879 ARHGEF12Q9NZN5 1544 aa7.65□□□□□ -1.19
ZEB1-209ENST00000542879 UNC13BO14795 1591 aa7.64□□□□□ -1.19
ZEB1-209ENST00000542879 ZNF644Q9H582 1327 aaPredicted RBP7.64□□□□□ -1.19
ZEB1-209ENST00000542879 USP47Q96K76 1375 aa7.64□□□□□ -1.19
ZEB1-209ENST00000542879 LRPPRCP42704 1394 aaKnown RBP7.64□□□□□ -1.19
ZEB1-209ENST00000542879 SAMD9LQ8IVG5 1584 aa7.63□□□□□ -1.19
ZEB1-209ENST00000542879 KIDINS220Q9ULH0 1771 aa7.63□□□□□ -1.19
ZEB1-209ENST00000542879 SLC4A1APQ9BWU0 796 aaKnown RBP7.63□□□□□ -1.19
ZEB1-209ENST00000542879 TROQ12816 1431 aaPredicted RBP7.63□□□□□ -1.19
ZEB1-209ENST00000542879 GPATCH8Q9UKJ3 1502 aaKnown RBP7.63□□□□□ -1.19
ZEB1-209ENST00000542879 HECW2Q9P2P5 1572 aa7.63□□□□□ -1.19
ZEB1-209ENST00000542879 NOP58Q9Y2X3 529 aaKnown RBP7.62□□□□□ -1.19
ZEB1-209ENST00000542879 LMTK2Q8IWU2 1503 aa7.62□□□□□ -1.19
ZEB1-209ENST00000542879 ROCK2O75116 1388 aaKnown RBP7.61□□□□□ -1.19
ZEB1-209ENST00000542879 PAK3O75914 559 aaPredicted RBP7.61□□□□□ -1.19
ZEB1-209ENST00000542879 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
ZEB1-209ENST00000542879 TRPM1Q7Z4N2 1603 aa7.61□□□□□ -1.19
ZEB1-209ENST00000542879 MROH1Q8NDA8 1641 aa7.61□□□□□ -1.19
ZEB1-209ENST00000542879 DEKP35659 375 aaKnown RBP7.6□□□□□ -1.19
ZEB1-209ENST00000542879 PLEKHH2Q8IVE3 1493 aa7.6□□□□□ -1.19
ZEB1-209ENST00000542879 MLH3Q9UHC1 1453 aa7.59□□□□□ -1.19
ZEB1-209ENST00000542879 DIP2CQ9Y2E4 1556 aa7.59□□□□□ -1.19
ZEB1-209ENST00000542879 KTN1Q86UP2 1357 aaKnown RBP7.59□□□□□ -1.19
ZEB1-209ENST00000542879 PTPRGP23470 1445 aa7.59□□□□□ -1.19
ZEB1-209ENST00000542879 ZFYVE16Q7Z3T8 1539 aa7.59□□□□□ -1.19
ZEB1-209ENST00000542879 LAMC1P11047 1609 aa7.59□□□□□ -1.19
ZEB1-209ENST00000542879 IQGAP3Q86VI3 1631 aa7.59□□□□□ -1.19
ZEB1-209ENST00000542879 ABCA6Q8N139 1617 aa7.59□□□□□ -1.19
ZEB1-209ENST00000542879 BRD4O60885 1362 aaPredicted RBP7.59□□□□□ -1.2
ZEB1-209ENST00000542879 KIF15Q9NS87 1388 aa7.59□□□□□ -1.2
ZEB1-209ENST00000542879 PRDM15P57071 1507 aaPredicted RBP7.58□□□□□ -1.2
ZEB1-209ENST00000542879 ARID3CA6NKF2 412 aa7.58□□□□□ -1.2
ZEB1-209ENST00000542879 IPO9Q96P70 1041 aaKnown RBP7.58□□□□□ -1.2
ZEB1-209ENST00000542879 RTEL1-TNFRSF6BF6WH68 1400 aa7.57□□□□□ -1.2
ZEB1-209ENST00000542879 ANKRD50Q9ULJ7 1429 aa7.57□□□□□ -1.2
ZEB1-209ENST00000542879 PIK3C2BO00750 1634 aa7.57□□□□□ -1.2
ZEB1-209ENST00000542879 ANKRD30AQ9BXX3 1397 aa7.57□□□□□ -1.2
ZEB1-209ENST00000542879 ASXL2Q76L83 1435 aa7.56□□□□□ -1.2
ZEB1-209ENST00000542879 PKD2Q13563 968 aa7.56□□□□□ -1.2
ZEB1-209ENST00000542879 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.56□□□□□ -1.2
ZEB1-209ENST00000542879 MYBBP1AQ9BQG0 1328 aaKnown RBP7.55□□□□□ -1.2
ZEB1-209ENST00000542879 WASHC2CQ9Y4E1 1318 aa7.55□□□□□ -1.2
ZEB1-209ENST00000542879 PARD3Q8TEW0 1356 aa7.55□□□□□ -1.2
ZEB1-209ENST00000542879 CFDP1Q9UEE9 299 aaPredicted RBP7.55□□□□□ -1.2
ZEB1-209ENST00000542879 INSRP06213 1382 aa7.55□□□□□ -1.2
ZEB1-209ENST00000542879 PLCH2O75038 1416 aa7.55□□□□□ -1.2
ZEB1-209ENST00000542879 C9orf84Q5VXU9 1444 aa7.55□□□□□ -1.2
ZEB1-209ENST00000542879 IFT172Q9UG01 1749 aa7.54□□□□□ -1.2
ZEB1-209ENST00000542879 RRP1P56182 461 aaKnown RBP7.54□□□□□ -1.2
ZEB1-209ENST00000542879 RALBP1Q15311 655 aa7.54□□□□□ -1.2
ZEB1-209ENST00000542879 ANP32AP39687 249 aaKnown RBP7.54□□□□□ -1.2
ZEB1-209ENST00000542879 TMC1Q8TDI8 760 aa7.53□□□□□ -1.2
ZEB1-209ENST00000542879 BLMP54132 1417 aaPredicted RBP7.53□□□□□ -1.2
ZEB1-209ENST00000542879 PRAG1Q86YV5 1406 aa7.52□□□□□ -1.2
ZEB1-209ENST00000542879 PREX1Q8TCU6 1659 aa7.52□□□□□ -1.21
ZEB1-209ENST00000542879 COL17A1Q9UMD9 1497 aaPredicted RBP7.52□□□□□ -1.21
ZEB1-209ENST00000542879 GPRASP1Q5JY77 1395 aa7.52□□□□□ -1.21
ZEB1-209ENST00000542879 NBR1Q14596 966 aa7.52□□□□□ -1.21
ZEB1-209ENST00000542879 CARD11Q9BXL7 1154 aa7.52□□□□□ -1.21
ZEB1-209ENST00000542879 POGZQ7Z3K3 1410 aa7.52□□□□□ -1.21
ZEB1-209ENST00000542879 NUP155O75694 1391 aa7.52□□□□□ -1.21
ZEB1-209ENST00000542879 ST20-MTHFSA0A0A6YYL1 179 aa7.52□□□□□ -1.21
ZEB1-209ENST00000542879 JPH4Q96JJ6 628 aa7.52□□□□□ -1.21
ZEB1-209ENST00000542879 TCERG1O14776 1098 aaKnown RBP7.51□□□□□ -1.21
ZEB1-209ENST00000542879 EXOC6Q8TAG9 804 aa7.51□□□□□ -1.21
ZEB1-209ENST00000542879 PLEKHG5O94827 1062 aa7.51□□□□□ -1.21
ZEB1-209ENST00000542879 ZNF326Q5BKZ1 582 aaKnown RBP7.51□□□□□ -1.21
ZEB1-209ENST00000542879 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
ZEB1-209ENST00000542879 MADDQ8WXG6 1647 aa7.51□□□□□ -1.21
ZEB1-209ENST00000542879 PDE3BQ13370 1112 aa7.51□□□□□ -1.21
ZEB1-209ENST00000542879 RTN4Q9NQC3 1192 aaKnown RBP7.51□□□□□ -1.21
ZEB1-209ENST00000542879 DAXXQ9UER7 740 aaPredicted RBP7.51□□□□□ -1.21
ZEB1-209ENST00000542879 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms