RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 PDE4AP27815 886 aa7.07□□□□□ -1.28
KDM3B-209ENST00000542866 WDR7Q9Y4E6 1490 aa7.06□□□□□ -1.28
KDM3B-209ENST00000542866 ANKRD30AQ9BXX3 1397 aa7.05□□□□□ -1.28
KDM3B-209ENST00000542866 TCERG1O14776 1098 aaKnown RBP7.05□□□□□ -1.28
KDM3B-209ENST00000542866 TAOK2Q9UL54 1235 aa7.05□□□□□ -1.28
KDM3B-209ENST00000542866 UHRF1BP1LA0JNW5 1464 aa7.05□□□□□ -1.28
KDM3B-209ENST00000542866 RNF123Q5XPI4 1314 aa7.05□□□□□ -1.28
KDM3B-209ENST00000542866 HOMEZQ8IX15 550 aa7.05□□□□□ -1.28
KDM3B-209ENST00000542866 AFAP1Q8N556 730 aa7.05□□□□□ -1.28
KDM3B-209ENST00000542866 PNISRQ8TF01 805 aaKnown RBP7.05□□□□□ -1.28
KDM3B-209ENST00000542866 PPM1GO15355 546 aaPredicted RBP7.04□□□□□ -1.28
KDM3B-209ENST00000542866 RRP1P56182 461 aaKnown RBP7.04□□□□□ -1.28
KDM3B-209ENST00000542866 DENND4BO75064 1496 aaPredicted RBP7.04□□□□□ -1.28
KDM3B-209ENST00000542866 KIF14Q15058 1648 aa7.04□□□□□ -1.28
KDM3B-209ENST00000542866 MIA2Q96PC5 1412 aa7.04□□□□□ -1.28
KDM3B-209ENST00000542866 ABCA8O94911 1581 aa7.04□□□□□ -1.28
KDM3B-209ENST00000542866 MLECQ14165 292 aa7.04□□□□□ -1.28
KDM3B-209ENST00000542866 RCAN3Q9UKA8 241 aa7.03□□□□□ -1.28
KDM3B-209ENST00000542866 GGT6Q6P531 493 aa7.03□□□□□ -1.28
KDM3B-209ENST00000542866 RAPGEF3O95398 923 aa7.03□□□□□ -1.28
KDM3B-209ENST00000542866 SKAP1Q86WV1 359 aa7.03□□□□□ -1.28
KDM3B-209ENST00000542866 USP35Q9P2H5 1018 aa7.03□□□□□ -1.28
KDM3B-209ENST00000542866 SUPT6HQ7KZ85 1726 aaKnown RBP7.03□□□□□ -1.28
KDM3B-209ENST00000542866 SCAPERQ9BY12 1400 aa7.02□□□□□ -1.28
KDM3B-209ENST00000542866 BACH2Q9BYV9 841 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 SHROOM2Q13796 1616 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 PLEKHH2Q8IVE3 1493 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 ANKRD30BQ9BXX2 1392 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 KIF3BO15066 747 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 SLC4A3P48751 1232 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 BRPF3Q9ULD4 1205 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 DHX29Q7Z478 1369 aaKnown RBP7.02□□□□□ -1.29
KDM3B-209ENST00000542866 KDM6BO15054 1643 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 PLIN1O60240 522 aa7.02□□□□□ -1.29
KDM3B-209ENST00000542866 USP47Q96K76 1375 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 KDM2AQ9Y2K7 1162 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 RIMBP3CA6NJZ7 1639 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 RIMBP3BA6NNM3 1639 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 RIMBP3Q9UFD9 1639 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 SPATA31E1Q6ZUB1 1445 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 FANCAO15360 1455 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 STAG3Q9UJ98 1225 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 KANK1Q14678 1352 aa7.01□□□□□ -1.29
KDM3B-209ENST00000542866 CHGAP10645 457 aaKnown RBP7□□□□□ -1.29
KDM3B-209ENST00000542866 PLCH2O75038 1416 aa7□□□□□ -1.29
KDM3B-209ENST00000542866 RPRD2Q5VT52 1461 aaKnown RBP7□□□□□ -1.29
KDM3B-209ENST00000542866 GPATCH8Q9UKJ3 1502 aaKnown RBP7□□□□□ -1.29
KDM3B-209ENST00000542866 CARD11Q9BXL7 1154 aa7□□□□□ -1.29
KDM3B-209ENST00000542866 ADGRL1O94910 1474 aa7□□□□□ -1.29
KDM3B-209ENST00000542866 GSE1Q14687 1217 aa7□□□□□ -1.29
KDM3B-209ENST00000542866 DDRGK1Q96HY6 314 aa7□□□□□ -1.29
KDM3B-209ENST00000542866 MS4A1P11836 297 aa6.99□□□□□ -1.29
KDM3B-209ENST00000542866 CDCA7LQ96GN5 454 aa6.99□□□□□ -1.29
KDM3B-209ENST00000542866 KIF15Q9NS87 1388 aa6.99□□□□□ -1.29
KDM3B-209ENST00000542866 TEX14Q8IWB6 1497 aa6.99□□□□□ -1.29
KDM3B-209ENST00000542866 NUP155O75694 1391 aa6.98□□□□□ -1.29
KDM3B-209ENST00000542866 NFKBIBQ15653 356 aa6.98□□□□□ -1.29
KDM3B-209ENST00000542866 WASHC2CQ9Y4E1 1318 aa6.98□□□□□ -1.29
KDM3B-209ENST00000542866 PKD2Q13563 968 aa6.98□□□□□ -1.29
KDM3B-209ENST00000542866 MAGI3Q5TCQ9 1506 aa6.98□□□□□ -1.29
KDM3B-209ENST00000542866 MYBBP1AQ9BQG0 1328 aaKnown RBP6.98□□□□□ -1.29
KDM3B-209ENST00000542866 ST20-MTHFSA0A0A6YYL1 179 aa6.97□□□□□ -1.29
KDM3B-209ENST00000542866 CRBNQ96SW2 442 aa6.97□□□□□ -1.29
KDM3B-209ENST00000542866 C9orf84Q5VXU9 1444 aa6.97□□□□□ -1.29
KDM3B-209ENST00000542866 CAMSAP2Q08AD1 1489 aa6.97□□□□□ -1.29
KDM3B-209ENST00000542866 FRAT1Q92837 279 aaPredicted RBP6.97□□□□□ -1.29
KDM3B-209ENST00000542866 RALBP1Q15311 655 aa6.97□□□□□ -1.29
KDM3B-209ENST00000542866 TCOF1Q13428 1488 aaKnown RBP6.97□□□□□ -1.29
KDM3B-209ENST00000542866 CCDC141Q6ZP82 1450 aa6.97□□□□□ -1.29
KDM3B-209ENST00000542866 ZCCHC11Q5TAX3 1644 aaKnown RBP6.96□□□□□ -1.3
KDM3B-209ENST00000542866 ADCY10Q96PN6 1610 aa6.96□□□□□ -1.3
KDM3B-209ENST00000542866 DAPK1P53355 1430 aa6.96□□□□□ -1.3
KDM3B-209ENST00000542866 LRRIQ1Q96JM4 1722 aa6.96□□□□□ -1.3
KDM3B-209ENST00000542866 GCC2Q8IWJ2 1684 aa6.96□□□□□ -1.3
KDM3B-209ENST00000542866 BRD4O60885 1362 aaPredicted RBP6.95□□□□□ -1.3
KDM3B-209ENST00000542866 ANKRD50Q9ULJ7 1429 aa6.95□□□□□ -1.3
KDM3B-209ENST00000542866 ROCK2O75116 1388 aaKnown RBP6.95□□□□□ -1.3
KDM3B-209ENST00000542866 CC2D1BQ5T0F9 858 aaKnown RBP6.95□□□□□ -1.3
KDM3B-209ENST00000542866 PDE3BQ13370 1112 aa6.95□□□□□ -1.3
KDM3B-209ENST00000542866 NLRP13Q86W25 1043 aa6.94□□□□□ -1.3
KDM3B-209ENST00000542866 DCAF11Q8TEB1 546 aa6.94□□□□□ -1.3
KDM3B-209ENST00000542866 ABCC10Q5T3U5 1492 aa6.94□□□□□ -1.3
KDM3B-209ENST00000542866 LRPPRCP42704 1394 aaKnown RBP6.94□□□□□ -1.3
KDM3B-209ENST00000542866 RGS3P49796 1198 aa6.94□□□□□ -1.3
KDM3B-209ENST00000542866 ABCC5O15440 1437 aa6.94□□□□□ -1.3
KDM3B-209ENST00000542866 KIAA1107Q9UPP5 1409 aa6.94□□□□□ -1.3
KDM3B-209ENST00000542866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.93□□□□□ -1.3
KDM3B-209ENST00000542866 C20orf194Q5TEA3 1177 aa6.93□□□□□ -1.3
KDM3B-209ENST00000542866 BCORL1Q5H9F3 1711 aa6.93□□□□□ -1.3
KDM3B-209ENST00000542866 FRAT2O75474 233 aaPredicted RBP6.93□□□□□ -1.3
KDM3B-209ENST00000542866 ROCK1Q13464 1354 aa6.93□□□□□ -1.3
KDM3B-209ENST00000542866 ZNF518AQ6AHZ1 1483 aa6.93□□□□□ -1.3
KDM3B-209ENST00000542866 KTN1Q86UP2 1357 aaKnown RBP6.92□□□□□ -1.3
KDM3B-209ENST00000542866 RGL3Q3MIN7 710 aa6.92□□□□□ -1.3
KDM3B-209ENST00000542866 ITSN2Q9NZM3 1697 aa6.92□□□□□ -1.3
KDM3B-209ENST00000542866 TRAPPC8Q9Y2L5 1435 aa6.92□□□□□ -1.3
KDM3B-209ENST00000542866 SYCP2Q9BX26 1530 aa6.92□□□□□ -1.3
KDM3B-209ENST00000542866 NEO1Q92859 1461 aa6.92□□□□□ -1.3
KDM3B-209ENST00000542866 FAM161AQ3B820 660 aa6.91□□□□□ -1.3
KDM3B-209ENST00000542866 PZPP20742 1482 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms