RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 MROH1Q8NDA8 1641 aa19.48■□□□□ 0.71
CHFR-221ENST00000542714 A2MP01023 1474 aa19.48■□□□□ 0.71
CHFR-221ENST00000542714 FAM135AQ9P2D6 1515 aa19.47■□□□□ 0.71
CHFR-221ENST00000542714 RNF17Q9BXT8 1623 aaKnown RBP19.47■□□□□ 0.71
CHFR-221ENST00000542714 NUP155O75694 1391 aa19.46■□□□□ 0.71
CHFR-221ENST00000542714 YEATS2Q9ULM3 1422 aa19.46■□□□□ 0.71
CHFR-221ENST00000542714 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
CHFR-221ENST00000542714 SLC4A1APQ9BWU0 796 aaKnown RBP19.44■□□□□ 0.7
CHFR-221ENST00000542714 PRDM15P57071 1507 aaPredicted RBP19.44■□□□□ 0.7
CHFR-221ENST00000542714 VWDEQ8N2E2 1590 aa19.44■□□□□ 0.7
CHFR-221ENST00000542714 SIN3AQ96ST3 1273 aa19.42■□□□□ 0.7
CHFR-221ENST00000542714 FOXD1Q16676 465 aa19.41■□□□□ 0.7
CHFR-221ENST00000542714 ANKRD30BQ9BXX2 1392 aa19.4■□□□□ 0.7
CHFR-221ENST00000542714 ARHGEF40Q8TER5 1519 aa19.4■□□□□ 0.7
CHFR-221ENST00000542714 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
CHFR-221ENST00000542714 SIGLEC1Q9BZZ2 1709 aa19.39■□□□□ 0.69
CHFR-221ENST00000542714 TET3O43151 1660 aa19.38■□□□□ 0.69
CHFR-221ENST00000542714 CEP152O94986 1710 aa19.37■□□□□ 0.69
CHFR-221ENST00000542714 E9PCH4 1651 aa19.37■□□□□ 0.69
CHFR-221ENST00000542714 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
CHFR-221ENST00000542714 PKD2Q13563 968 aa19.37■□□□□ 0.69
CHFR-221ENST00000542714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
CHFR-221ENST00000542714 KIF3BO15066 747 aa19.36■□□□□ 0.69
CHFR-221ENST00000542714 ATP10AO60312 1499 aa19.35■□□□□ 0.69
CHFR-221ENST00000542714 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
CHFR-221ENST00000542714 LMTK2Q8IWU2 1503 aa19.32■□□□□ 0.68
CHFR-221ENST00000542714 AGLP35573 1532 aa19.31■□□□□ 0.68
CHFR-221ENST00000542714 RPRD2Q5VT52 1461 aaKnown RBP19.3■□□□□ 0.68
CHFR-221ENST00000542714 KANK1Q14678 1352 aa19.3■□□□□ 0.68
CHFR-221ENST00000542714 EFCAB6Q5THR3 1501 aa19.3■□□□□ 0.68
CHFR-221ENST00000542714 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
CHFR-221ENST00000542714 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
CHFR-221ENST00000542714 ZC3H13Q5T200 1668 aaKnown RBP19.28■□□□□ 0.68
CHFR-221ENST00000542714 ABCC3O15438 1527 aa19.28■□□□□ 0.68
CHFR-221ENST00000542714 CAMSAP1Q5T5Y3 1602 aa19.27■□□□□ 0.68
CHFR-221ENST00000542714 TIMELESSQ9UNS1 1208 aa19.26■□□□□ 0.67
CHFR-221ENST00000542714 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
CHFR-221ENST00000542714 TRPM2O94759 1503 aa19.22■□□□□ 0.67
CHFR-221ENST00000542714 GGT6Q6P531 493 aa19.22■□□□□ 0.67
CHFR-221ENST00000542714 PTPRTO14522 1441 aa19.22■□□□□ 0.67
CHFR-221ENST00000542714 CLTCL1P53675 1640 aa19.2■□□□□ 0.66
CHFR-221ENST00000542714 CFAP65Q6ZU64 1925 aaKnown RBP19.17■□□□□ 0.66
CHFR-221ENST00000542714 PPP1R15AO75807 674 aaPredicted RBP19.17■□□□□ 0.66
CHFR-221ENST00000542714 CLTCQ00610 1675 aaKnown RBP19.17■□□□□ 0.66
CHFR-221ENST00000542714 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
CHFR-221ENST00000542714 NPATQ14207 1427 aa19.17■□□□□ 0.66
CHFR-221ENST00000542714 L3MBTL2Q969R5 705 aa19.15■□□□□ 0.66
CHFR-221ENST00000542714 WASHC2CQ9Y4E1 1318 aa19.14■□□□□ 0.65
CHFR-221ENST00000542714 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.65
CHFR-221ENST00000542714 UGGT1Q9NYU2 1555 aa19.13■□□□□ 0.65
CHFR-221ENST00000542714 PREX1Q8TCU6 1659 aa19.12■□□□□ 0.65
CHFR-221ENST00000542714 SYNMO15061 1565 aa19.11■□□□□ 0.65
CHFR-221ENST00000542714 NOS1P29475 1434 aa19.1■□□□□ 0.65
CHFR-221ENST00000542714 KIF1BO60333 1816 aa19.1■□□□□ 0.65
CHFR-221ENST00000542714 MROH2AA6NES4 1674 aa19.1■□□□□ 0.65
CHFR-221ENST00000542714 SPATA31E1Q6ZUB1 1445 aa19.09■□□□□ 0.65
CHFR-221ENST00000542714 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
CHFR-221ENST00000542714 PIK3C2BO00750 1634 aa19.09■□□□□ 0.65
CHFR-221ENST00000542714 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.65
CHFR-221ENST00000542714 NEURL4Q96JN8 1562 aa19.08■□□□□ 0.65
CHFR-221ENST00000542714 MLECQ14165 292 aa19.05■□□□□ 0.64
CHFR-221ENST00000542714 NBPF8Q3BBV2 869 aa19.04■□□□□ 0.64
CHFR-221ENST00000542714 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
CHFR-221ENST00000542714 IFT172Q9UG01 1749 aa19.04■□□□□ 0.64
CHFR-221ENST00000542714 ADGRB3O60242 1522 aa19.04■□□□□ 0.64
CHFR-221ENST00000542714 ERVK-7P63135 1459 aa19.03■□□□□ 0.64
CHFR-221ENST00000542714 FER1L4A9Z1Z3 1794 aa19.03■□□□□ 0.64
CHFR-221ENST00000542714 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.63
CHFR-221ENST00000542714 ARID4BQ4LE39 1312 aaPredicted RBP19.01■□□□□ 0.63
CHFR-221ENST00000542714 MYO5BQ9ULV0 1848 aa19■□□□□ 0.63
CHFR-221ENST00000542714 RGL3Q3MIN7 710 aa18.98■□□□□ 0.63
CHFR-221ENST00000542714 TRPM1Q7Z4N2 1603 aa18.98■□□□□ 0.63
CHFR-221ENST00000542714 MADDQ8WXG6 1647 aa18.97■□□□□ 0.63
CHFR-221ENST00000542714 PPLO60437 1756 aa18.97■□□□□ 0.63
CHFR-221ENST00000542714 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
CHFR-221ENST00000542714 C3P01024 1663 aa18.96■□□□□ 0.63
CHFR-221ENST00000542714 FBXO31Q5XUX0 539 aaPredicted RBP18.96■□□□□ 0.63
CHFR-221ENST00000542714 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
CHFR-221ENST00000542714 PRAG1Q86YV5 1406 aa18.96■□□□□ 0.63
CHFR-221ENST00000542714 RALGAPBQ86X10 1494 aa18.96■□□□□ 0.63
CHFR-221ENST00000542714 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
CHFR-221ENST00000542714 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
CHFR-221ENST00000542714 ADAMTSL3P82987 1691 aa18.93■□□□□ 0.62
CHFR-221ENST00000542714 KDM2AQ9Y2K7 1162 aa18.93■□□□□ 0.62
CHFR-221ENST00000542714 MYOM2P54296 1465 aa18.91■□□□□ 0.62
CHFR-221ENST00000542714 RIMS1Q86UR5 1692 aaKnown RBP18.9■□□□□ 0.62
CHFR-221ENST00000542714 ZNF326Q5BKZ1 582 aaKnown RBP18.9■□□□□ 0.62
CHFR-221ENST00000542714 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
CHFR-221ENST00000542714 IDI1Q13907 227 aa18.89■□□□□ 0.61
CHFR-221ENST00000542714 SLC52A1Q9NWF4 448 aa18.89■□□□□ 0.61
CHFR-221ENST00000542714 NEXMIFQ5QGS0 1516 aa18.89■□□□□ 0.61
CHFR-221ENST00000542714 LAMC1P11047 1609 aa18.89■□□□□ 0.61
CHFR-221ENST00000542714 NRXN1Q9ULB1 1477 aa18.88■□□□□ 0.61
CHFR-221ENST00000542714 KIAA1210Q9ULL0 1709 aa18.88■□□□□ 0.61
CHFR-221ENST00000542714 CHGAP10645 457 aaKnown RBP18.85■□□□□ 0.61
CHFR-221ENST00000542714 TNRQ92752 1358 aa18.84■□□□□ 0.61
CHFR-221ENST00000542714 STAC3Q96MF2 364 aa18.84■□□□□ 0.61
CHFR-221ENST00000542714 KDM5AP29375 1690 aaKnown RBP18.84■□□□□ 0.61
CHFR-221ENST00000542714 GPRASP1Q5JY77 1395 aa18.83■□□□□ 0.61
CHFR-221ENST00000542714 A2ML1A8K2U0 1454 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms