RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 IQSEC2Q5JU85 1478 aa24.44■■□□□ 1.5
SCNN1A-217ENST00000542260 LOC105371045A0A1W2PR82 267 aa24.42■■□□□ 1.5
SCNN1A-217ENST00000542260 PKD2Q13563 968 aa24.41■■□□□ 1.5
SCNN1A-217ENST00000542260 MAST1Q9Y2H9 1570 aa24.41■■□□□ 1.5
SCNN1A-217ENST00000542260 A2ML1A8K2U0 1454 aa24.4■■□□□ 1.5
SCNN1A-217ENST00000542260 PZPP20742 1482 aa24.4■■□□□ 1.5
SCNN1A-217ENST00000542260 TCOF1Q13428 1488 aaKnown RBP24.39■■□□□ 1.5
SCNN1A-217ENST00000542260 DNMT1P26358 1616 aaKnown RBP24.39■■□□□ 1.49
SCNN1A-217ENST00000542260 NCKAP5LQ9HCH0 1330 aa24.38■■□□□ 1.49
SCNN1A-217ENST00000542260 WASHC2CQ9Y4E1 1318 aa24.37■■□□□ 1.49
SCNN1A-217ENST00000542260 MIA2Q96PC5 1412 aa24.37■■□□□ 1.49
SCNN1A-217ENST00000542260 ZC3H13Q5T200 1668 aaKnown RBP24.36■■□□□ 1.49
SCNN1A-217ENST00000542260 MYOM3Q5VTT5 1437 aa24.35■■□□□ 1.49
SCNN1A-217ENST00000542260 RNF17Q9BXT8 1623 aaKnown RBP24.35■■□□□ 1.49
SCNN1A-217ENST00000542260 EIF2AK4Q9P2K8 1649 aaKnown RBP24.35■■□□□ 1.49
SCNN1A-217ENST00000542260 TNRQ92752 1358 aa24.35■■□□□ 1.49
SCNN1A-217ENST00000542260 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
SCNN1A-217ENST00000542260 KANK4Q5T7N3 995 aaPredicted RBP24.32■■□□□ 1.48
SCNN1A-217ENST00000542260 NLRP1Q9C000 1473 aa24.29■■□□□ 1.48
SCNN1A-217ENST00000542260 APLP2Q06481 763 aa24.28■■□□□ 1.48
SCNN1A-217ENST00000542260 FBXO31Q5XUX0 539 aaPredicted RBP24.28■■□□□ 1.48
SCNN1A-217ENST00000542260 ZNF335Q9H4Z2 1342 aaPredicted RBP24.28■■□□□ 1.48
SCNN1A-217ENST00000542260 CROCC2H7BZ55 1655 aa24.26■■□□□ 1.47
SCNN1A-217ENST00000542260 ABCC3O15438 1527 aa24.25■■□□□ 1.47
SCNN1A-217ENST00000542260 DUOX2Q9NRD8 1548 aa24.25■■□□□ 1.47
SCNN1A-217ENST00000542260 UGGT1Q9NYU2 1555 aa24.25■■□□□ 1.47
SCNN1A-217ENST00000542260 SHANK2Q9UPX8 1470 aa24.23■■□□□ 1.47
SCNN1A-217ENST00000542260 NEURL4Q96JN8 1562 aa24.23■■□□□ 1.47
SCNN1A-217ENST00000542260 PTPN23Q9H3S7 1636 aa24.23■■□□□ 1.47
SCNN1A-217ENST00000542260 MROH1Q8NDA8 1641 aa24.21■■□□□ 1.47
SCNN1A-217ENST00000542260 SPATA31D1Q6ZQQ2 1576 aa24.21■■□□□ 1.47
SCNN1A-217ENST00000542260 THEMISQ8N1K5 641 aaPredicted RBP24.21■■□□□ 1.47
SCNN1A-217ENST00000542260 CEP152O94986 1710 aa24.21■■□□□ 1.47
SCNN1A-217ENST00000542260 ANKLE2Q86XL3 938 aa24.19■■□□□ 1.46
SCNN1A-217ENST00000542260 DEPDC5O75140 1603 aa24.19■■□□□ 1.46
SCNN1A-217ENST00000542260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.18■■□□□ 1.46
SCNN1A-217ENST00000542260 CPS1P31327 1500 aa24.18■■□□□ 1.46
SCNN1A-217ENST00000542260 ERBINQ96RT1 1412 aa24.18■■□□□ 1.46
SCNN1A-217ENST00000542260 ERVK-7P63135 1459 aa24.17■■□□□ 1.46
SCNN1A-217ENST00000542260 KIF15Q9NS87 1388 aa24.16■■□□□ 1.46
SCNN1A-217ENST00000542260 PRDM15P57071 1507 aaPredicted RBP24.15■■□□□ 1.46
SCNN1A-217ENST00000542260 UBAP1LF5GYI3 381 aa24.15■■□□□ 1.46
SCNN1A-217ENST00000542260 DISP3Q9P2K9 1392 aa24.15■■□□□ 1.46
SCNN1A-217ENST00000542260 MED14O60244 1454 aa24.14■■□□□ 1.46
SCNN1A-217ENST00000542260 ABCC5O15440 1437 aa24.14■■□□□ 1.45
SCNN1A-217ENST00000542260 DAPK1P53355 1430 aa24.13■■□□□ 1.45
SCNN1A-217ENST00000542260 IQGAP1P46940 1657 aa24.13■■□□□ 1.45
SCNN1A-217ENST00000542260 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
SCNN1A-217ENST00000542260 FGD6Q6ZV73 1430 aa24.12■■□□□ 1.45
SCNN1A-217ENST00000542260 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
SCNN1A-217ENST00000542260 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.45
SCNN1A-217ENST00000542260 RRP7BPQ9NSQ0 103 aa24.08■■□□□ 1.45
SCNN1A-217ENST00000542260 ARHGAP31Q2M1Z3 1444 aa24.08■■□□□ 1.44
SCNN1A-217ENST00000542260 CFAP65Q6ZU64 1925 aaKnown RBP24.08■■□□□ 1.44
SCNN1A-217ENST00000542260 KANK1Q14678 1352 aa24.06■■□□□ 1.44
SCNN1A-217ENST00000542260 ANKRD30AQ9BXX3 1397 aa24.05■■□□□ 1.44
SCNN1A-217ENST00000542260 TOM1O60784 492 aa24.02■■□□□ 1.44
SCNN1A-217ENST00000542260 SYNMO15061 1565 aa24.01■■□□□ 1.43
SCNN1A-217ENST00000542260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24■■□□□ 1.43
SCNN1A-217ENST00000542260 SCAF11Q99590 1463 aaKnown RBP24■■□□□ 1.43
SCNN1A-217ENST00000542260 SLIT1O75093 1534 aa23.99■■□□□ 1.43
SCNN1A-217ENST00000542260 LMTK2Q8IWU2 1503 aa23.99■■□□□ 1.43
SCNN1A-217ENST00000542260 SCAF1Q9H7N4 1312 aaKnown RBP23.98■■□□□ 1.43
SCNN1A-217ENST00000542260 PIK3C2BO00750 1634 aa23.97■■□□□ 1.43
SCNN1A-217ENST00000542260 ADGRL2O95490 1459 aa23.97■■□□□ 1.43
SCNN1A-217ENST00000542260 KDM5AP29375 1690 aaKnown RBP23.97■■□□□ 1.43
SCNN1A-217ENST00000542260 CHIC2Q9UKJ5 165 aa23.97■■□□□ 1.43
SCNN1A-217ENST00000542260 ARHGAP23Q9P227 1491 aa23.96■■□□□ 1.43
SCNN1A-217ENST00000542260 STRCP1A6NGW2 1772 aa23.94■■□□□ 1.42
SCNN1A-217ENST00000542260 PIP4K2BP78356 416 aa23.94■■□□□ 1.42
SCNN1A-217ENST00000542260 ILDR2Q71H61 639 aa23.93■■□□□ 1.42
SCNN1A-217ENST00000542260 EFCAB6Q5THR3 1501 aa23.93■■□□□ 1.42
SCNN1A-217ENST00000542260 EID1Q9Y6B2 187 aa23.92■■□□□ 1.42
SCNN1A-217ENST00000542260 FAM50AQ14320 339 aaKnown RBP23.91■■□□□ 1.42
SCNN1A-217ENST00000542260 TXNDC2Q86VQ3 553 aa23.91■■□□□ 1.42
SCNN1A-217ENST00000542260 STAG3Q9UJ98 1225 aa23.91■■□□□ 1.42
SCNN1A-217ENST00000542260 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
SCNN1A-217ENST00000542260 LTKP29376 864 aa23.87■■□□□ 1.41
SCNN1A-217ENST00000542260 TMEM2Q9UHN6 1383 aa23.87■■□□□ 1.41
SCNN1A-217ENST00000542260 ANKRD50Q9ULJ7 1429 aa23.86■■□□□ 1.41
SCNN1A-217ENST00000542260 SOCS7O14512 581 aa23.86■■□□□ 1.41
SCNN1A-217ENST00000542260 HSPA1LP34931 641 aa23.86■■□□□ 1.41
SCNN1A-217ENST00000542260 ALKQ9UM73 1620 aa23.85■■□□□ 1.41
SCNN1A-217ENST00000542260 RPRD2Q5VT52 1461 aaKnown RBP23.85■■□□□ 1.41
SCNN1A-217ENST00000542260 NOS1P29475 1434 aa23.84■■□□□ 1.41
SCNN1A-217ENST00000542260 ADGRB3O60242 1522 aa23.84■■□□□ 1.41
SCNN1A-217ENST00000542260 TET3O43151 1660 aa23.83■■□□□ 1.4
SCNN1A-217ENST00000542260 IDI1Q13907 227 aa23.82■■□□□ 1.4
SCNN1A-217ENST00000542260 MED1Q15648 1581 aaPredicted RBP23.81■■□□□ 1.4
SCNN1A-217ENST00000542260 GCC2Q8IWJ2 1684 aa23.8■■□□□ 1.4
SCNN1A-217ENST00000542260 SLC52A1Q9NWF4 448 aa23.8■■□□□ 1.4
SCNN1A-217ENST00000542260 UNC13BO14795 1591 aa23.79■■□□□ 1.4
SCNN1A-217ENST00000542260 XIRP1Q702N8 1843 aaKnown RBP23.77■■□□□ 1.4
SCNN1A-217ENST00000542260 ROCK1Q13464 1354 aa23.74■■□□□ 1.39
SCNN1A-217ENST00000542260 MYO5BQ9ULV0 1848 aa23.71■■□□□ 1.39
SCNN1A-217ENST00000542260 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.38
SCNN1A-217ENST00000542260 NWD1Q149M9 1564 aa23.69■■□□□ 1.38
SCNN1A-217ENST00000542260 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
SCNN1A-217ENST00000542260 E9PCH4 1651 aa23.68■■□□□ 1.38
SCNN1A-217ENST00000542260 KCNA6P17658 529 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms