RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 C11orf95C9JLR9 678 aaPredicted RBP24.37■■□□□ 1.49
TMEM50B-210ENST00000542230 KIF3BO15066 747 aa24.36■■□□□ 1.49
TMEM50B-210ENST00000542230 RGL3Q3MIN7 710 aa24.36■■□□□ 1.49
TMEM50B-210ENST00000542230 WASHC2AQ641Q2 1341 aa24.35■■□□□ 1.49
TMEM50B-210ENST00000542230 DCAF11Q8TEB1 546 aa24.35■■□□□ 1.49
TMEM50B-210ENST00000542230 RAPGEF3O95398 923 aa24.34■■□□□ 1.49
TMEM50B-210ENST00000542230 CCDC144AA2RUR9 1427 aa24.33■■□□□ 1.49
TMEM50B-210ENST00000542230 KIDINS220Q9ULH0 1771 aa24.32■■□□□ 1.48
TMEM50B-210ENST00000542230 ZNF518AQ6AHZ1 1483 aa24.31■■□□□ 1.48
TMEM50B-210ENST00000542230 DHX29Q7Z478 1369 aaKnown RBP24.3■■□□□ 1.48
TMEM50B-210ENST00000542230 SPATA31E1Q6ZUB1 1445 aa24.29■■□□□ 1.48
TMEM50B-210ENST00000542230 POGZQ7Z3K3 1410 aa24.29■■□□□ 1.48
TMEM50B-210ENST00000542230 E9PCH4 1651 aa24.24■■□□□ 1.47
TMEM50B-210ENST00000542230 UHRF1BP1Q6BDS2 1440 aa24.24■■□□□ 1.47
TMEM50B-210ENST00000542230 DEPDC5O75140 1603 aa24.24■■□□□ 1.47
TMEM50B-210ENST00000542230 FAM69CQ0P6D2 419 aa24.24■■□□□ 1.47
TMEM50B-210ENST00000542230 CENPBP07199 599 aaPredicted RBP24.23■■□□□ 1.47
TMEM50B-210ENST00000542230 KDM5CP41229 1560 aa24.22■■□□□ 1.47
TMEM50B-210ENST00000542230 MROH1Q8NDA8 1641 aa24.22■■□□□ 1.47
TMEM50B-210ENST00000542230 CFAP74Q9C0B2 1584 aa24.21■■□□□ 1.47
TMEM50B-210ENST00000542230 USP47Q96K76 1375 aa24.21■■□□□ 1.47
TMEM50B-210ENST00000542230 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
TMEM50B-210ENST00000542230 ATP10AO60312 1499 aa24.2■■□□□ 1.46
TMEM50B-210ENST00000542230 A2MP01023 1474 aa24.2■■□□□ 1.46
TMEM50B-210ENST00000542230 MAP3K4Q9Y6R4 1608 aa24.19■■□□□ 1.46
TMEM50B-210ENST00000542230 NEO1Q92859 1461 aa24.19■■□□□ 1.46
TMEM50B-210ENST00000542230 CARD11Q9BXL7 1154 aa24.18■■□□□ 1.46
TMEM50B-210ENST00000542230 CCDC7Q96M83 1385 aa24.18■■□□□ 1.46
TMEM50B-210ENST00000542230 MLH3Q9UHC1 1453 aa24.18■■□□□ 1.46
TMEM50B-210ENST00000542230 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
TMEM50B-210ENST00000542230 VWDEQ8N2E2 1590 aa24.18■■□□□ 1.46
TMEM50B-210ENST00000542230 RALGAPBQ86X10 1494 aa24.17■■□□□ 1.46
TMEM50B-210ENST00000542230 KIF7Q2M1P5 1343 aa24.17■■□□□ 1.46
TMEM50B-210ENST00000542230 NBPF1Q3BBV0 1214 aa24.16■■□□□ 1.46
TMEM50B-210ENST00000542230 GGT6Q6P531 493 aa24.16■■□□□ 1.46
TMEM50B-210ENST00000542230 KANK1Q14678 1352 aa24.16■■□□□ 1.46
TMEM50B-210ENST00000542230 HECW2Q9P2P5 1572 aa24.15■■□□□ 1.46
TMEM50B-210ENST00000542230 PRAG1Q86YV5 1406 aa24.15■■□□□ 1.46
TMEM50B-210ENST00000542230 PRDM15P57071 1507 aaPredicted RBP24.14■■□□□ 1.46
TMEM50B-210ENST00000542230 ANP32CO43423 234 aa24.14■■□□□ 1.46
TMEM50B-210ENST00000542230 ABCA6Q8N139 1617 aa24.14■■□□□ 1.45
TMEM50B-210ENST00000542230 EIF2AK4Q9P2K8 1649 aaKnown RBP24.14■■□□□ 1.45
TMEM50B-210ENST00000542230 TET3O43151 1660 aa24.13■■□□□ 1.45
TMEM50B-210ENST00000542230 BCORL1Q5H9F3 1711 aa24.13■■□□□ 1.45
TMEM50B-210ENST00000542230 PTPRTO14522 1441 aa24.12■■□□□ 1.45
TMEM50B-210ENST00000542230 DIP2BQ9P265 1576 aa24.12■■□□□ 1.45
TMEM50B-210ENST00000542230 GLI2P10070 1586 aa24.11■■□□□ 1.45
TMEM50B-210ENST00000542230 TSPOAP1O95153 1857 aa24.1■■□□□ 1.45
TMEM50B-210ENST00000542230 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
TMEM50B-210ENST00000542230 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
TMEM50B-210ENST00000542230 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
TMEM50B-210ENST00000542230 YEATS2Q9ULM3 1422 aa24.1■■□□□ 1.45
TMEM50B-210ENST00000542230 UGGT1Q9NYU2 1555 aa24.1■■□□□ 1.45
TMEM50B-210ENST00000542230 TRPM2O94759 1503 aa24.09■■□□□ 1.45
TMEM50B-210ENST00000542230 SPHKAPQ2M3C7 1700 aa24.09■■□□□ 1.45
TMEM50B-210ENST00000542230 CLTCL1P53675 1640 aa24.09■■□□□ 1.45
TMEM50B-210ENST00000542230 RICTORQ6R327 1708 aa24.08■■□□□ 1.44
TMEM50B-210ENST00000542230 CEP152O94986 1710 aa24.06■■□□□ 1.44
TMEM50B-210ENST00000542230 PPRC1Q5VV67 1664 aaKnown RBP24.06■■□□□ 1.44
TMEM50B-210ENST00000542230 TRPM1Q7Z4N2 1603 aa24.05■■□□□ 1.44
TMEM50B-210ENST00000542230 CNTLNQ9NXG0 1405 aa24.05■■□□□ 1.44
TMEM50B-210ENST00000542230 CFAP65Q6ZU64 1925 aaKnown RBP24.04■■□□□ 1.44
TMEM50B-210ENST00000542230 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
TMEM50B-210ENST00000542230 RNF17Q9BXT8 1623 aaKnown RBP24.03■■□□□ 1.44
TMEM50B-210ENST00000542230 EFCAB6Q5THR3 1501 aa24.03■■□□□ 1.44
TMEM50B-210ENST00000542230 WASHC2CQ9Y4E1 1318 aa24.01■■□□□ 1.43
TMEM50B-210ENST00000542230 GTF3C3Q9Y5Q9 886 aa24■■□□□ 1.43
TMEM50B-210ENST00000542230 NPATQ14207 1427 aa23.99■■□□□ 1.43
TMEM50B-210ENST00000542230 CCER2I3L3R5 266 aa23.99■■□□□ 1.43
TMEM50B-210ENST00000542230 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
TMEM50B-210ENST00000542230 LMTK2Q8IWU2 1503 aa23.97■■□□□ 1.43
TMEM50B-210ENST00000542230 POLR1AO95602 1720 aaPredicted RBP23.97■■□□□ 1.43
TMEM50B-210ENST00000542230 GPRASP1Q5JY77 1395 aa23.95■■□□□ 1.43
TMEM50B-210ENST00000542230 CCDC184Q52MB2 194 aa23.95■■□□□ 1.42
TMEM50B-210ENST00000542230 ABCC3O15438 1527 aa23.95■■□□□ 1.42
TMEM50B-210ENST00000542230 CHGAP10645 457 aaKnown RBP23.92■■□□□ 1.42
TMEM50B-210ENST00000542230 COL17A1Q9UMD9 1497 aaPredicted RBP23.91■■□□□ 1.42
TMEM50B-210ENST00000542230 MADDQ8WXG6 1647 aa23.91■■□□□ 1.42
TMEM50B-210ENST00000542230 PRKRIP1Q9H875 184 aaPredicted RBP23.91■■□□□ 1.42
TMEM50B-210ENST00000542230 KIF13AQ9H1H9 1805 aa23.89■■□□□ 1.42
TMEM50B-210ENST00000542230 ADGRF5Q8IZF2 1346 aa23.89■■□□□ 1.42
TMEM50B-210ENST00000542230 TESK2Q96S53 571 aa23.88■■□□□ 1.41
TMEM50B-210ENST00000542230 MROH2AA6NES4 1674 aa23.87■■□□□ 1.41
TMEM50B-210ENST00000542230 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
TMEM50B-210ENST00000542230 ZMYM4Q5VZL5 1548 aa23.85■■□□□ 1.41
TMEM50B-210ENST00000542230 CFAP70Q5T0N1 1121 aa23.85■■□□□ 1.41
TMEM50B-210ENST00000542230 CAMSAP1Q5T5Y3 1602 aa23.85■■□□□ 1.41
TMEM50B-210ENST00000542230 DISP3Q9P2K9 1392 aa23.84■■□□□ 1.41
TMEM50B-210ENST00000542230 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
TMEM50B-210ENST00000542230 KIF1BO60333 1816 aa23.83■■□□□ 1.41
TMEM50B-210ENST00000542230 LAMC1P11047 1609 aa23.81■■□□□ 1.4
TMEM50B-210ENST00000542230 NUTM2DQ5VT03 806 aaPredicted RBP23.81■■□□□ 1.4
TMEM50B-210ENST00000542230 NOS1P29475 1434 aa23.79■■□□□ 1.4
TMEM50B-210ENST00000542230 MLECQ14165 292 aa23.79■■□□□ 1.4
TMEM50B-210ENST00000542230 FBXO31Q5XUX0 539 aaPredicted RBP23.79■■□□□ 1.4
TMEM50B-210ENST00000542230 ADGRB3O60242 1522 aa23.78■■□□□ 1.4
TMEM50B-210ENST00000542230 SYNMO15061 1565 aa23.78■■□□□ 1.4
TMEM50B-210ENST00000542230 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
TMEM50B-210ENST00000542230 IDI1Q13907 227 aa23.77■■□□□ 1.4
TMEM50B-210ENST00000542230 NEURL4Q96JN8 1562 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms