RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 EEA1Q15075 1411 aa12.87□□□□□ -0.35
NPIPB4-215ENST00000542133 A2ML1A8K2U0 1454 aa12.86□□□□□ -0.35
NPIPB4-215ENST00000542133 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
NPIPB4-215ENST00000542133 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
NPIPB4-215ENST00000542133 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
NPIPB4-215ENST00000542133 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
NPIPB4-215ENST00000542133 ATP7AQ04656 1500 aa12.83□□□□□ -0.35
NPIPB4-215ENST00000542133 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.35
NPIPB4-215ENST00000542133 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
NPIPB4-215ENST00000542133 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
NPIPB4-215ENST00000542133 ARHGAP35Q9NRY4 1499 aa12.83□□□□□ -0.36
NPIPB4-215ENST00000542133 RNF17Q9BXT8 1623 aaKnown RBP12.81□□□□□ -0.36
NPIPB4-215ENST00000542133 A2MP01023 1474 aa12.8□□□□□ -0.36
NPIPB4-215ENST00000542133 RGS17Q9UGC6 210 aaPredicted RBP12.8□□□□□ -0.36
NPIPB4-215ENST00000542133 SYNMO15061 1565 aa12.79□□□□□ -0.36
NPIPB4-215ENST00000542133 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
NPIPB4-215ENST00000542133 STRCP1A6NGW2 1772 aa12.77□□□□□ -0.36
NPIPB4-215ENST00000542133 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
NPIPB4-215ENST00000542133 ADGBQ8N7X0 1667 aa12.77□□□□□ -0.37
NPIPB4-215ENST00000542133 MED14O60244 1454 aa12.76□□□□□ -0.37
NPIPB4-215ENST00000542133 CCDC18Q5T9S5 1454 aa12.76□□□□□ -0.37
NPIPB4-215ENST00000542133 LRRC7Q96NW7 1537 aa12.76□□□□□ -0.37
NPIPB4-215ENST00000542133 IQGAP1P46940 1657 aa12.75□□□□□ -0.37
NPIPB4-215ENST00000542133 GGT6Q6P531 493 aa12.75□□□□□ -0.37
NPIPB4-215ENST00000542133 TNRQ92752 1358 aa12.75□□□□□ -0.37
NPIPB4-215ENST00000542133 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
NPIPB4-215ENST00000542133 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
NPIPB4-215ENST00000542133 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
NPIPB4-215ENST00000542133 PZPP20742 1482 aa12.72□□□□□ -0.37
NPIPB4-215ENST00000542133 KIAA1107Q9UPP5 1409 aa12.72□□□□□ -0.37
NPIPB4-215ENST00000542133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
NPIPB4-215ENST00000542133 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
NPIPB4-215ENST00000542133 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
NPIPB4-215ENST00000542133 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
NPIPB4-215ENST00000542133 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
NPIPB4-215ENST00000542133 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.37
NPIPB4-215ENST00000542133 KDM5DQ9BY66 1539 aa12.71□□□□□ -0.38
NPIPB4-215ENST00000542133 CASKIN1Q8WXD9 1431 aa12.71□□□□□ -0.38
NPIPB4-215ENST00000542133 CAPN15O75808 1086 aa12.7□□□□□ -0.38
NPIPB4-215ENST00000542133 HNRNPMP52272 730 aaKnown RBP eCLIP12.7□□□□□ -0.38
NPIPB4-215ENST00000542133 ANKLE2Q86XL3 938 aa12.7□□□□□ -0.38
NPIPB4-215ENST00000542133 NLRP1Q9C000 1473 aa12.7□□□□□ -0.38
NPIPB4-215ENST00000542133 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
NPIPB4-215ENST00000542133 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
NPIPB4-215ENST00000542133 FBXO31Q5XUX0 539 aaPredicted RBP12.68□□□□□ -0.38
NPIPB4-215ENST00000542133 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
NPIPB4-215ENST00000542133 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
NPIPB4-215ENST00000542133 MIA2Q96PC5 1412 aa12.65□□□□□ -0.38
NPIPB4-215ENST00000542133 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
NPIPB4-215ENST00000542133 THEMISQ8N1K5 641 aaPredicted RBP12.65□□□□□ -0.38
NPIPB4-215ENST00000542133 FYCO1Q9BQS8 1478 aa12.65□□□□□ -0.38
NPIPB4-215ENST00000542133 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
NPIPB4-215ENST00000542133 RTEL1-TNFRSF6BF6WH68 1400 aa12.62□□□□□ -0.39
NPIPB4-215ENST00000542133 MBD5Q9P267 1494 aa12.62□□□□□ -0.39
NPIPB4-215ENST00000542133 ERICH6Q7L0X2 663 aa12.62□□□□□ -0.39
NPIPB4-215ENST00000542133 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
NPIPB4-215ENST00000542133 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
NPIPB4-215ENST00000542133 APLP2Q06481 763 aa12.61□□□□□ -0.39
NPIPB4-215ENST00000542133 FAM135BQ49AJ0 1406 aa12.61□□□□□ -0.39
NPIPB4-215ENST00000542133 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
NPIPB4-215ENST00000542133 ROBO1Q9Y6N7 1651 aa12.6□□□□□ -0.39
NPIPB4-215ENST00000542133 TIAM1Q13009 1591 aa12.59□□□□□ -0.39
NPIPB4-215ENST00000542133 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
NPIPB4-215ENST00000542133 KIF3BO15066 747 aa12.58□□□□□ -0.4
NPIPB4-215ENST00000542133 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
NPIPB4-215ENST00000542133 WASHC2CQ9Y4E1 1318 aa12.58□□□□□ -0.4
NPIPB4-215ENST00000542133 ERVK-7P63135 1459 aa12.56□□□□□ -0.4
NPIPB4-215ENST00000542133 ABCC3O15438 1527 aa12.56□□□□□ -0.4
NPIPB4-215ENST00000542133 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
NPIPB4-215ENST00000542133 ARHGAP23Q9P227 1491 aa12.55□□□□□ -0.4
NPIPB4-215ENST00000542133 MAP3K1Q13233 1512 aa12.55□□□□□ -0.4
NPIPB4-215ENST00000542133 NCOA2Q15596 1464 aa12.54□□□□□ -0.4
NPIPB4-215ENST00000542133 CCDC141Q6ZP82 1450 aa12.54□□□□□ -0.4
NPIPB4-215ENST00000542133 SLIT1O75093 1534 aa12.54□□□□□ -0.4
NPIPB4-215ENST00000542133 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
NPIPB4-215ENST00000542133 LRRC9Q6ZRR7 1453 aa12.53□□□□□ -0.4
NPIPB4-215ENST00000542133 DSG3P32926 999 aa12.53□□□□□ -0.4
NPIPB4-215ENST00000542133 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
NPIPB4-215ENST00000542133 TMEM94Q12767 1356 aa12.51□□□□□ -0.41
NPIPB4-215ENST00000542133 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
NPIPB4-215ENST00000542133 EHBP1L1Q8N3D4 1523 aa12.51□□□□□ -0.41
NPIPB4-215ENST00000542133 MTUS2Q5JR59 1369 aa12.5□□□□□ -0.41
NPIPB4-215ENST00000542133 LRP6O75581 1613 aa12.5□□□□□ -0.41
NPIPB4-215ENST00000542133 MROH1Q8NDA8 1641 aa12.5□□□□□ -0.41
NPIPB4-215ENST00000542133 COL16A1Q07092 1604 aaPredicted RBP12.49□□□□□ -0.41
NPIPB4-215ENST00000542133 CAMSAP2Q08AD1 1489 aa12.49□□□□□ -0.41
NPIPB4-215ENST00000542133 JCADQ9P266 1359 aa12.49□□□□□ -0.41
NPIPB4-215ENST00000542133 LTKP29376 864 aa12.49□□□□□ -0.41
NPIPB4-215ENST00000542133 CEP152O94986 1710 aa12.48□□□□□ -0.41
NPIPB4-215ENST00000542133 EIF2AK4Q9P2K8 1649 aaKnown RBP12.48□□□□□ -0.41
NPIPB4-215ENST00000542133 NWD1Q149M9 1564 aa12.47□□□□□ -0.41
NPIPB4-215ENST00000542133 ARHGEF5Q12774 1597 aa12.47□□□□□ -0.41
NPIPB4-215ENST00000542133 PRDM15P57071 1507 aaPredicted RBP12.47□□□□□ -0.41
NPIPB4-215ENST00000542133 CEP162Q5TB80 1403 aa12.46□□□□□ -0.41
NPIPB4-215ENST00000542133 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.41
NPIPB4-215ENST00000542133 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.42
NPIPB4-215ENST00000542133 PIK3C2BO00750 1634 aa12.45□□□□□ -0.42
NPIPB4-215ENST00000542133 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
NPIPB4-215ENST00000542133 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
NPIPB4-215ENST00000542133 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms