RNA–Protein interactions for RNA: ENST00000541616.1

CACNA2D4-214, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 4

Gene CACNA2D4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-214ENST00000541616 KDM5DQ9BY66 1539 aa26.52■■□□□ 1.84
CACNA2D4-214ENST00000541616 DNMT1P26358 1616 aaKnown RBP26.51■■□□□ 1.83
CACNA2D4-214ENST00000541616 DUOX2Q9NRD8 1548 aa26.5■■□□□ 1.83
CACNA2D4-214ENST00000541616 DMRT2Q9Y5R5 561 aa26.5■■□□□ 1.83
CACNA2D4-214ENST00000541616 EIF2AK4Q9P2K8 1649 aaKnown RBP26.5■■□□□ 1.83
CACNA2D4-214ENST00000541616 KIF15Q9NS87 1388 aa26.49■■□□□ 1.83
CACNA2D4-214ENST00000541616 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
CACNA2D4-214ENST00000541616 RRP7BPQ9NSQ0 103 aa26.47■■□□□ 1.83
CACNA2D4-214ENST00000541616 RNF17Q9BXT8 1623 aaKnown RBP26.47■■□□□ 1.83
CACNA2D4-214ENST00000541616 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.82
CACNA2D4-214ENST00000541616 ANKRD30AQ9BXX3 1397 aa26.45■■□□□ 1.82
CACNA2D4-214ENST00000541616 MYO3AQ8NEV4 1616 aa26.43■■□□□ 1.82
CACNA2D4-214ENST00000541616 PZPP20742 1482 aa26.42■■□□□ 1.82
CACNA2D4-214ENST00000541616 STRCQ7RTU9 1775 aa26.42■■□□□ 1.82
CACNA2D4-214ENST00000541616 ERBINQ96RT1 1412 aa26.41■■□□□ 1.82
CACNA2D4-214ENST00000541616 ILDR1Q86SU0 546 aaPredicted RBP26.41■■□□□ 1.82
CACNA2D4-214ENST00000541616 FBXO31Q5XUX0 539 aaPredicted RBP26.4■■□□□ 1.82
CACNA2D4-214ENST00000541616 ZC3H13Q5T200 1668 aaKnown RBP26.39■■□□□ 1.82
CACNA2D4-214ENST00000541616 TNRQ92752 1358 aa26.39■■□□□ 1.82
CACNA2D4-214ENST00000541616 ZNF142P52746 1687 aaPredicted RBP26.38■■□□□ 1.81
CACNA2D4-214ENST00000541616 CEP170BQ9Y4F5 1589 aaPredicted RBP26.38■■□□□ 1.81
CACNA2D4-214ENST00000541616 ABCC3O15438 1527 aa26.38■■□□□ 1.81
CACNA2D4-214ENST00000541616 CAMSAP1Q5T5Y3 1602 aa26.37■■□□□ 1.81
CACNA2D4-214ENST00000541616 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
CACNA2D4-214ENST00000541616 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
CACNA2D4-214ENST00000541616 MROH1Q8NDA8 1641 aa26.35■■□□□ 1.81
CACNA2D4-214ENST00000541616 A2ML1A8K2U0 1454 aa26.35■■□□□ 1.81
CACNA2D4-214ENST00000541616 PTPRTO14522 1441 aa26.34■■□□□ 1.81
CACNA2D4-214ENST00000541616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.33■■□□□ 1.81
CACNA2D4-214ENST00000541616 ADGRL2O95490 1459 aa26.33■■□□□ 1.81
CACNA2D4-214ENST00000541616 KANK1Q14678 1352 aa26.33■■□□□ 1.8
CACNA2D4-214ENST00000541616 CEP152O94986 1710 aa26.31■■□□□ 1.8
CACNA2D4-214ENST00000541616 PLA2R1Q13018 1463 aa26.3■■□□□ 1.8
CACNA2D4-214ENST00000541616 PRDM15P57071 1507 aaPredicted RBP26.3■■□□□ 1.8
CACNA2D4-214ENST00000541616 PKD2Q13563 968 aa26.3■■□□□ 1.8
CACNA2D4-214ENST00000541616 FBXO41Q8TF61 875 aa26.29■■□□□ 1.8
CACNA2D4-214ENST00000541616 NCKAP5LQ9HCH0 1330 aa26.28■■□□□ 1.8
CACNA2D4-214ENST00000541616 NLRP1Q9C000 1473 aa26.28■■□□□ 1.8
CACNA2D4-214ENST00000541616 DEPDC5O75140 1603 aa26.26■■□□□ 1.79
CACNA2D4-214ENST00000541616 CERKQ8TCT0 537 aa26.26■■□□□ 1.79
CACNA2D4-214ENST00000541616 THEMISQ8N1K5 641 aaPredicted RBP26.24■■□□□ 1.79
CACNA2D4-214ENST00000541616 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
CACNA2D4-214ENST00000541616 CFAP65Q6ZU64 1925 aaKnown RBP26.24■■□□□ 1.79
CACNA2D4-214ENST00000541616 ERVK-7P63135 1459 aa26.23■■□□□ 1.79
CACNA2D4-214ENST00000541616 ARHGAP31Q2M1Z3 1444 aa26.22■■□□□ 1.79
CACNA2D4-214ENST00000541616 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
CACNA2D4-214ENST00000541616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.21■■□□□ 1.797e-7■□□□□ 10.9
CACNA2D4-214ENST00000541616 UGGT1Q9NYU2 1555 aa26.2■■□□□ 1.78
CACNA2D4-214ENST00000541616 ITGAEP38570 1179 aa26.19■■□□□ 1.78
CACNA2D4-214ENST00000541616 ROCK1Q13464 1354 aa26.18■■□□□ 1.78
CACNA2D4-214ENST00000541616 LMTK2Q8IWU2 1503 aa26.16■■□□□ 1.78
CACNA2D4-214ENST00000541616 ANKLE2Q86XL3 938 aa26.16■■□□□ 1.78
CACNA2D4-214ENST00000541616 VWDEQ8N2E2 1590 aa26.16■■□□□ 1.78
CACNA2D4-214ENST00000541616 POLR1AO95602 1720 aaPredicted RBP26.12■■□□□ 1.77
CACNA2D4-214ENST00000541616 RRBP1Q9P2E9 1410 aaKnown RBP26.08■■□□□ 1.77
CACNA2D4-214ENST00000541616 EFCAB6Q5THR3 1501 aa26.08■■□□□ 1.77
CACNA2D4-214ENST00000541616 LTBP4Q8N2S1 1624 aa26.07■■□□□ 1.76
CACNA2D4-214ENST00000541616 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
CACNA2D4-214ENST00000541616 ZNF335Q9H4Z2 1342 aaPredicted RBP26.06■■□□□ 1.76
CACNA2D4-214ENST00000541616 NEURL4Q96JN8 1562 aa26.05■■□□□ 1.76
CACNA2D4-214ENST00000541616 UBR1Q8IWV7 1749 aa26.05■■□□□ 1.76
CACNA2D4-214ENST00000541616 UNC13BO14795 1591 aa26.04■■□□□ 1.76
CACNA2D4-214ENST00000541616 NPHP4O75161 1426 aaPredicted RBP26.02■■□□□ 1.76
CACNA2D4-214ENST00000541616 RPRD2Q5VT52 1461 aaKnown RBP26.02■■□□□ 1.76
CACNA2D4-214ENST00000541616 TET3O43151 1660 aa26.02■■□□□ 1.76
CACNA2D4-214ENST00000541616 MED14O60244 1454 aa26.01■■□□□ 1.75
CACNA2D4-214ENST00000541616 NOS1P29475 1434 aa26■■□□□ 1.75
CACNA2D4-214ENST00000541616 IDI1Q13907 227 aa26■■□□□ 1.75
CACNA2D4-214ENST00000541616 PIK3C2BO00750 1634 aa25.99■■□□□ 1.75
CACNA2D4-214ENST00000541616 IQSEC2Q5JU85 1478 aa25.99■■□□□ 1.75
CACNA2D4-214ENST00000541616 SLC52A1Q9NWF4 448 aa25.99■■□□□ 1.75
CACNA2D4-214ENST00000541616 EID1Q9Y6B2 187 aa25.99■■□□□ 1.75
CACNA2D4-214ENST00000541616 GCC2Q8IWJ2 1684 aa25.98■■□□□ 1.75
CACNA2D4-214ENST00000541616 NUP155O75694 1391 aa25.97■■□□□ 1.75
CACNA2D4-214ENST00000541616 TXNDC2Q86VQ3 553 aa25.97■■□□□ 1.75
CACNA2D4-214ENST00000541616 SYNMO15061 1565 aa25.97■■□□□ 1.75
CACNA2D4-214ENST00000541616 SCAF11Q99590 1463 aaKnown RBP25.96■■□□□ 1.75
CACNA2D4-214ENST00000541616 IQGAP1P46940 1657 aa25.96■■□□□ 1.75
CACNA2D4-214ENST00000541616 SLIT1O75093 1534 aa25.95■■□□□ 1.74
CACNA2D4-214ENST00000541616 KDM5AP29375 1690 aaKnown RBP25.95■■□□□ 1.74
CACNA2D4-214ENST00000541616 IQGAP3Q86VI3 1631 aa25.95■■□□□ 1.74
CACNA2D4-214ENST00000541616 ARHGAP23Q9P227 1491 aa25.94■■□□□ 1.74
CACNA2D4-214ENST00000541616 TMEM2Q9UHN6 1383 aa25.93■■□□□ 1.74
CACNA2D4-214ENST00000541616 LTKP29376 864 aa25.92■■□□□ 1.74
CACNA2D4-214ENST00000541616 CPS1P31327 1500 aa25.9■■□□□ 1.74
CACNA2D4-214ENST00000541616 E9PCH4 1651 aa25.89■■□□□ 1.73
CACNA2D4-214ENST00000541616 ADGRB3O60242 1522 aa25.88■■□□□ 1.73
CACNA2D4-214ENST00000541616 NAIPQ13075 1403 aa25.87■■□□□ 1.73
CACNA2D4-214ENST00000541616 UBAP1LF5GYI3 381 aa25.84■■□□□ 1.73
CACNA2D4-214ENST00000541616 HDGFP51858 240 aaKnown RBP25.83■■□□□ 1.73
CACNA2D4-214ENST00000541616 CHGAP10645 457 aaKnown RBP25.82■■□□□ 1.72
CACNA2D4-214ENST00000541616 HFM1A2PYH4 1435 aa25.81■■□□□ 1.72
CACNA2D4-214ENST00000541616 TRIM52Q96A61 297 aa25.78■■□□□ 1.72
CACNA2D4-214ENST00000541616 BCANQ96GW7 911 aa25.78■■□□□ 1.72
CACNA2D4-214ENST00000541616 PPP1R15AO75807 674 aaPredicted RBP25.77■■□□□ 1.72
CACNA2D4-214ENST00000541616 TMEM131LA2VDJ0 1609 aa25.77■■□□□ 1.72
CACNA2D4-214ENST00000541616 MYO5BQ9ULV0 1848 aa25.77■■□□□ 1.72
CACNA2D4-214ENST00000541616 RIMS2Q9UQ26 1411 aa25.74■■□□□ 1.71
CACNA2D4-214ENST00000541616 TOM1O60784 492 aa25.74■■□□□ 1.71
CACNA2D4-214ENST00000541616 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms