RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 AKT1S1Q96B36 256 aa9.86□□□□□ -0.83
EPHA4-214ENST00000541600 DHX57Q6P158 1386 aaKnown RBP9.86□□□□□ -0.83
EPHA4-214ENST00000541600 NEUROD2Q15784 382 aa9.85□□□□□ -0.83
EPHA4-214ENST00000541600 CFAP43Q8NDM7 1665 aa9.85□□□□□ -0.83
EPHA4-214ENST00000541600 LRRC9Q6ZRR7 1453 aa9.85□□□□□ -0.83
EPHA4-214ENST00000541600 TEX14Q8IWB6 1497 aa9.85□□□□□ -0.83
EPHA4-214ENST00000541600 ZNF467Q7Z7K2 595 aaPredicted RBP9.84□□□□□ -0.83
EPHA4-214ENST00000541600 FYCO1Q9BQS8 1478 aa9.83□□□□□ -0.84
EPHA4-214ENST00000541600 CASKIN1Q8WXD9 1431 aa9.82□□□□□ -0.84
EPHA4-214ENST00000541600 MADDQ8WXG6 1647 aa9.82□□□□□ -0.84
EPHA4-214ENST00000541600 PDAP1Q13442 181 aaKnown RBP9.82□□□□□ -0.84
EPHA4-214ENST00000541600 UHRF1BP1LA0JNW5 1464 aa9.82□□□□□ -0.84
EPHA4-214ENST00000541600 CTTNBP2Q8WZ74 1663 aa9.82□□□□□ -0.84
EPHA4-214ENST00000541600 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
EPHA4-214ENST00000541600 TESPA1A2RU30 521 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-214ENST00000541600 SLC24A3Q9HC58 644 aa9.81□□□□□ -0.84
EPHA4-214ENST00000541600 KDM5BQ9UGL1 1544 aa9.81□□□□□ -0.84
EPHA4-214ENST00000541600 E2F4Q16254 413 aa9.8□□□□□ -0.84
EPHA4-214ENST00000541600 MFRPQ9BY79 579 aa9.8□□□□□ -0.84
EPHA4-214ENST00000541600 ACIN1Q9UKV3 1341 aaKnown RBP9.8□□□□□ -0.84
EPHA4-214ENST00000541600 MAGI3Q5TCQ9 1506 aa9.79□□□□□ -0.84
EPHA4-214ENST00000541600 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
EPHA4-214ENST00000541600 FMN1Q68DA7 1419 aa9.79□□□□□ -0.84
EPHA4-214ENST00000541600 SAMD9Q5K651 1589 aa9.79□□□□□ -0.84
EPHA4-214ENST00000541600 SEMA3EO15041 775 aa9.78□□□□□ -0.84
EPHA4-214ENST00000541600 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
EPHA4-214ENST00000541600 BCORL1Q5H9F3 1711 aa9.78□□□□□ -0.84
EPHA4-214ENST00000541600 CD109Q6YHK3 1445 aa9.77□□□□□ -0.85
EPHA4-214ENST00000541600 RAPGEF3O95398 923 aa9.77□□□□□ -0.85
EPHA4-214ENST00000541600 CENPBP07199 599 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-214ENST00000541600 SRCAPQ6ZRS2 3230 aa9.77□□□□□ -0.85
EPHA4-214ENST00000541600 LTBP4Q8N2S1 1624 aa9.76□□□□□ -0.85
EPHA4-214ENST00000541600 RANGAP1P46060 587 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-214ENST00000541600 REM2Q8IYK8 340 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-214ENST00000541600 STRCQ7RTU9 1775 aa9.75□□□□□ -0.85
EPHA4-214ENST00000541600 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
EPHA4-214ENST00000541600 ZMYND10O75800 440 aa9.75□□□□□ -0.85
EPHA4-214ENST00000541600 ARAP3Q8WWN8 1544 aa9.75□□□□□ -0.85
EPHA4-214ENST00000541600 ZCCHC11Q5TAX3 1644 aaKnown RBP9.74□□□□□ -0.85
EPHA4-214ENST00000541600 PHLDB1Q86UU1 1377 aa9.74□□□□□ -0.85
EPHA4-214ENST00000541600 PPP1R37O75864 691 aa9.73□□□□□ -0.85
EPHA4-214ENST00000541600 KCNH8Q96L42 1107 aa9.73□□□□□ -0.85
EPHA4-214ENST00000541600 PCDHB8Q9UN66 801 aa9.73□□□□□ -0.85
EPHA4-214ENST00000541600 PCDHB13Q9Y5F0 798 aa9.73□□□□□ -0.85
EPHA4-214ENST00000541600 RIMS1Q86UR5 1692 aaKnown RBP9.73□□□□□ -0.85
EPHA4-214ENST00000541600 WDR7Q9Y4E6 1490 aa9.72□□□□□ -0.85
EPHA4-214ENST00000541600 DISP1Q96F81 1524 aa9.72□□□□□ -0.85
EPHA4-214ENST00000541600 PSEN1P49768 467 aa9.72□□□□□ -0.85
EPHA4-214ENST00000541600 SIGLEC1Q9BZZ2 1709 aa9.72□□□□□ -0.85
EPHA4-214ENST00000541600 RAB3GAP2Q9H2M9 1393 aa9.72□□□□□ -0.85
EPHA4-214ENST00000541600 FHOD3Q2V2M9 1422 aa9.71□□□□□ -0.86
EPHA4-214ENST00000541600 NEUROD1Q13562 356 aa9.7□□□□□ -0.86
EPHA4-214ENST00000541600 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
EPHA4-214ENST00000541600 YEATS2Q9ULM3 1422 aa9.7□□□□□ -0.86
EPHA4-214ENST00000541600 SMYD5Q6GMV2 418 aa9.69□□□□□ -0.86
EPHA4-214ENST00000541600 FBXO22Q8NEZ5 403 aa9.69□□□□□ -0.86
EPHA4-214ENST00000541600 FRMPD1Q5SYB0 1578 aa9.68□□□□□ -0.86
EPHA4-214ENST00000541600 ARID4BQ4LE39 1312 aaPredicted RBP9.68□□□□□ -0.86
EPHA4-214ENST00000541600 BARGINQ6ZT62 677 aa9.68□□□□□ -0.86
EPHA4-214ENST00000541600 ZNF579Q8NAF0 562 aaKnown RBP9.68□□□□□ -0.86
EPHA4-214ENST00000541600 MED1Q15648 1581 aaPredicted RBP9.67□□□□□ -0.86
EPHA4-214ENST00000541600 FGD6Q6ZV73 1430 aa9.67□□□□□ -0.86
EPHA4-214ENST00000541600 CEBPAP49715 358 aaPredicted RBP9.67□□□□□ -0.86
EPHA4-214ENST00000541600 NLRP6P59044 892 aa9.67□□□□□ -0.86
EPHA4-214ENST00000541600 CCDC18Q5T9S5 1454 aa9.66□□□□□ -0.86
EPHA4-214ENST00000541600 RGS17Q9UGC6 210 aaPredicted RBP9.66□□□□□ -0.86
EPHA4-214ENST00000541600 EHBP1L1Q8N3D4 1523 aa9.66□□□□□ -0.86
EPHA4-214ENST00000541600 SOX12O15370 315 aa9.65□□□□□ -0.86
EPHA4-214ENST00000541600 HSPA1LP34931 641 aa9.65□□□□□ -0.86
EPHA4-214ENST00000541600 ARIH1Q9Y4X5 557 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-214ENST00000541600 UGGT2Q9NYU1 1516 aa9.65□□□□□ -0.86
EPHA4-214ENST00000541600 NCKAP5LQ9HCH0 1330 aa9.64□□□□□ -0.87
EPHA4-214ENST00000541600 PITPNM1O00562 1244 aa9.64□□□□□ -0.87
EPHA4-214ENST00000541600 SUPT6HQ7KZ85 1726 aaKnown RBP9.64□□□□□ -0.87
EPHA4-214ENST00000541600 LRRIQ1Q96JM4 1722 aa9.64□□□□□ -0.87
EPHA4-214ENST00000541600 TCOF1Q13428 1488 aaKnown RBP9.64□□□□□ -0.87
EPHA4-214ENST00000541600 HFM1A2PYH4 1435 aa9.64□□□□□ -0.87
EPHA4-214ENST00000541600 MYOM3Q5VTT5 1437 aa9.64□□□□□ -0.87
EPHA4-214ENST00000541600 CARMIL2Q6F5E8 1435 aa9.64□□□□□ -0.87
EPHA4-214ENST00000541600 AKNAQ7Z591 1439 aa9.64□□□□□ -0.87
EPHA4-214ENST00000541600 EFCAB3Q8N7B9 438 aa9.63□□□□□ -0.87
EPHA4-214ENST00000541600 PTPRTO14522 1441 aa9.63□□□□□ -0.87
EPHA4-214ENST00000541600 NCOA2Q15596 1464 aa9.62□□□□□ -0.87
EPHA4-214ENST00000541600 MFSD10Q14728 455 aa9.62□□□□□ -0.87
EPHA4-214ENST00000541600 PHF8Q9UPP1 1060 aa9.62□□□□□ -0.87
EPHA4-214ENST00000541600 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
EPHA4-214ENST00000541600 IQGAP2Q13576 1575 aa9.62□□□□□ -0.87
EPHA4-214ENST00000541600 MTUS2Q5JR59 1369 aa9.62□□□□□ -0.87
EPHA4-214ENST00000541600 IQSEC2Q5JU85 1478 aa9.61□□□□□ -0.87
EPHA4-214ENST00000541600 PDE4AP27815 886 aa9.61□□□□□ -0.87
EPHA4-214ENST00000541600 AK7Q96M32 723 aa9.61□□□□□ -0.87
EPHA4-214ENST00000541600 LARP6Q9BRS8 491 aaKnown RBP9.61□□□□□ -0.87
EPHA4-214ENST00000541600 MIA2Q96PC5 1412 aa9.61□□□□□ -0.87
EPHA4-214ENST00000541600 HECW1Q76N89 1606 aa9.6□□□□□ -0.87
EPHA4-214ENST00000541600 UBAP1LF5GYI3 381 aa9.6□□□□□ -0.87
EPHA4-214ENST00000541600 MLECQ14165 292 aa9.6□□□□□ -0.87
EPHA4-214ENST00000541600 FAM50AQ14320 339 aaKnown RBP9.59□□□□□ -0.87
EPHA4-214ENST00000541600 PTPN23Q9H3S7 1636 aa9.58□□□□□ -0.88
EPHA4-214ENST00000541600 PPP1R15AO75807 674 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-214ENST00000541600 ZMYND15Q9H091 742 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms