RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
SUDS3-203ENST00000541591 MROH1Q8NDA8 1641 aa22.08■■□□□ 1.13
SUDS3-203ENST00000541591 DNMT1P26358 1616 aaKnown RBP22.07■■□□□ 1.12
SUDS3-203ENST00000541591 ZC3H13Q5T200 1668 aaKnown RBP22.07■■□□□ 1.12
SUDS3-203ENST00000541591 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
SUDS3-203ENST00000541591 TSPY4P0CV99 314 aa22.06■■□□□ 1.12
SUDS3-203ENST00000541591 TSPY10P0CW01 314 aa22.06■■□□□ 1.12
SUDS3-203ENST00000541591 APLP2Q06481 763 aa22.06■■□□□ 1.12
SUDS3-203ENST00000541591 CERKQ8TCT0 537 aa22.06■■□□□ 1.12
SUDS3-203ENST00000541591 RSPH4AQ5TD94 716 aa22.04■■□□□ 1.12
SUDS3-203ENST00000541591 FBXO31Q5XUX0 539 aaPredicted RBP22.04■■□□□ 1.12
SUDS3-203ENST00000541591 NCKAP5LQ9HCH0 1330 aa22.04■■□□□ 1.12
SUDS3-203ENST00000541591 PTPRTO14522 1441 aa22.02■■□□□ 1.12
SUDS3-203ENST00000541591 PZPP20742 1482 aa22.02■■□□□ 1.12
SUDS3-203ENST00000541591 ABCC3O15438 1527 aa22.01■■□□□ 1.11
SUDS3-203ENST00000541591 FGD6Q6ZV73 1430 aa22■■□□□ 1.11
SUDS3-203ENST00000541591 LTBP4Q8N2S1 1624 aa22■■□□□ 1.11
SUDS3-203ENST00000541591 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
SUDS3-203ENST00000541591 A2ML1A8K2U0 1454 aa22■■□□□ 1.11
SUDS3-203ENST00000541591 WASHC2CQ9Y4E1 1318 aa22■■□□□ 1.11
SUDS3-203ENST00000541591 FAM135AQ9P2D6 1515 aa22■■□□□ 1.11
SUDS3-203ENST00000541591 ABCC5O15440 1437 aa21.99■■□□□ 1.11
SUDS3-203ENST00000541591 DUOX2Q9NRD8 1548 aa21.99■■□□□ 1.11
SUDS3-203ENST00000541591 TNRQ92752 1358 aa21.98■■□□□ 1.11
SUDS3-203ENST00000541591 DAPK1P53355 1430 aa21.97■■□□□ 1.11
SUDS3-203ENST00000541591 PPP6R1Q9UPN7 881 aa21.97■■□□□ 1.11
SUDS3-203ENST00000541591 TCOF1Q13428 1488 aaKnown RBP21.96■■□□□ 1.11
SUDS3-203ENST00000541591 SHANK2Q9UPX8 1470 aa21.96■■□□□ 1.11
SUDS3-203ENST00000541591 NEURL4Q96JN8 1562 aa21.95■■□□□ 1.11
SUDS3-203ENST00000541591 PLA2R1Q13018 1463 aa21.95■■□□□ 1.1
SUDS3-203ENST00000541591 KIF15Q9NS87 1388 aa21.94■■□□□ 1.1
SUDS3-203ENST00000541591 DEPDC5O75140 1603 aa21.94■■□□□ 1.1
SUDS3-203ENST00000541591 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
SUDS3-203ENST00000541591 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
SUDS3-203ENST00000541591 PRDM15P57071 1507 aaPredicted RBP21.91■■□□□ 1.1
SUDS3-203ENST00000541591 UBR1Q8IWV7 1749 aa21.91■■□□□ 1.1
SUDS3-203ENST00000541591 SPATA31D1Q6ZQQ2 1576 aa21.91■■□□□ 1.1
SUDS3-203ENST00000541591 ZNF335Q9H4Z2 1342 aaPredicted RBP21.9■■□□□ 1.1
SUDS3-203ENST00000541591 UGGT1Q9NYU2 1555 aa21.9■■□□□ 1.1
SUDS3-203ENST00000541591 ERVK-7P63135 1459 aa21.89■■□□□ 1.09
SUDS3-203ENST00000541591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.87■■□□□ 1.09
SUDS3-203ENST00000541591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.092e-7■■□□□ 13.6
SUDS3-203ENST00000541591 ERBINQ96RT1 1412 aa21.86■■□□□ 1.09
SUDS3-203ENST00000541591 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
SUDS3-203ENST00000541591 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
SUDS3-203ENST00000541591 NLRP1Q9C000 1473 aa21.84■■□□□ 1.09
SUDS3-203ENST00000541591 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
SUDS3-203ENST00000541591 STRCP1A6NGW2 1772 aa21.84■■□□□ 1.09
SUDS3-203ENST00000541591 PIK3C2BO00750 1634 aa21.84■■□□□ 1.09
SUDS3-203ENST00000541591 MYO5BQ9ULV0 1848 aa21.83■■□□□ 1.09
SUDS3-203ENST00000541591 PKD2Q13563 968 aa21.83■■□□□ 1.09
SUDS3-203ENST00000541591 ANKRD30AQ9BXX3 1397 aa21.79■■□□□ 1.08
SUDS3-203ENST00000541591 ADGRL2O95490 1459 aa21.77■■□□□ 1.08
SUDS3-203ENST00000541591 VWDEQ8N2E2 1590 aa21.77■■□□□ 1.08
SUDS3-203ENST00000541591 SYNMO15061 1565 aa21.75■■□□□ 1.07
SUDS3-203ENST00000541591 IQSEC2Q5JU85 1478 aa21.75■■□□□ 1.07
SUDS3-203ENST00000541591 EFCAB6Q5THR3 1501 aa21.74■■□□□ 1.07
SUDS3-203ENST00000541591 NPHP4O75161 1426 aaPredicted RBP21.73■■□□□ 1.07
SUDS3-203ENST00000541591 GCC2Q8IWJ2 1684 aa21.72■■□□□ 1.07
SUDS3-203ENST00000541591 ANKLE2Q86XL3 938 aa21.72■■□□□ 1.07
SUDS3-203ENST00000541591 THEMISQ8N1K5 641 aaPredicted RBP21.72■■□□□ 1.07
SUDS3-203ENST00000541591 KANK1Q14678 1352 aa21.72■■□□□ 1.07
SUDS3-203ENST00000541591 TET3O43151 1660 aa21.7■■□□□ 1.06
SUDS3-203ENST00000541591 ARHGAP31Q2M1Z3 1444 aa21.7■■□□□ 1.06
SUDS3-203ENST00000541591 LMTK2Q8IWU2 1503 aa21.7■■□□□ 1.06
SUDS3-203ENST00000541591 UNC13BO14795 1591 aa21.7■■□□□ 1.06
SUDS3-203ENST00000541591 XIRP1Q702N8 1843 aaKnown RBP21.69■■□□□ 1.06
SUDS3-203ENST00000541591 MED14O60244 1454 aa21.69■■□□□ 1.06
SUDS3-203ENST00000541591 ITGAEP38570 1179 aa21.68■■□□□ 1.06
SUDS3-203ENST00000541591 E9PCH4 1651 aa21.68■■□□□ 1.06
SUDS3-203ENST00000541591 ANKRD50Q9ULJ7 1429 aa21.67■■□□□ 1.06
SUDS3-203ENST00000541591 UBAP1LF5GYI3 381 aa21.67■■□□□ 1.06
SUDS3-203ENST00000541591 CPS1P31327 1500 aa21.66■■□□□ 1.06
SUDS3-203ENST00000541591 KDM5AP29375 1690 aaKnown RBP21.66■■□□□ 1.06
SUDS3-203ENST00000541591 SCAF11Q99590 1463 aaKnown RBP21.65■■□□□ 1.06
SUDS3-203ENST00000541591 SLIT1O75093 1534 aa21.64■■□□□ 1.05
SUDS3-203ENST00000541591 ARHGAP23Q9P227 1491 aa21.63■■□□□ 1.05
SUDS3-203ENST00000541591 ADGRB3O60242 1522 aa21.62■■□□□ 1.05
SUDS3-203ENST00000541591 LTKP29376 864 aa21.61■■□□□ 1.05
SUDS3-203ENST00000541591 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
SUDS3-203ENST00000541591 IQGAP3Q86VI3 1631 aa21.61■■□□□ 1.05
SUDS3-203ENST00000541591 SCAF1Q9H7N4 1312 aaKnown RBP21.6■■□□□ 1.05
SUDS3-203ENST00000541591 ALKQ9UM73 1620 aa21.59■■□□□ 1.05
SUDS3-203ENST00000541591 NOS1P29475 1434 aa21.58■■□□□ 1.05
SUDS3-203ENST00000541591 STAG3Q9UJ98 1225 aa21.58■■□□□ 1.05
SUDS3-203ENST00000541591 PIP4K2BP78356 416 aa21.57■■□□□ 1.04
SUDS3-203ENST00000541591 IDI1Q13907 227 aa21.57■■□□□ 1.04
SUDS3-203ENST00000541591 TXNDC2Q86VQ3 553 aa21.57■■□□□ 1.04
SUDS3-203ENST00000541591 LRRC7Q96NW7 1537 aa21.55■■□□□ 1.04
SUDS3-203ENST00000541591 DISP3Q9P2K9 1392 aa21.55■■□□□ 1.04
SUDS3-203ENST00000541591 TMEM131LA2VDJ0 1609 aa21.55■■□□□ 1.04
SUDS3-203ENST00000541591 TMEM2Q9UHN6 1383 aa21.54■■□□□ 1.04
SUDS3-203ENST00000541591 SPHKAPQ2M3C7 1700 aa21.53■■□□□ 1.04
SUDS3-203ENST00000541591 ROCK1Q13464 1354 aa21.51■■□□□ 1.03
SUDS3-203ENST00000541591 RPRD2Q5VT52 1461 aaKnown RBP21.51■■□□□ 1.03
SUDS3-203ENST00000541591 EID1Q9Y6B2 187 aa21.5■■□□□ 1.03
SUDS3-203ENST00000541591 CHD2O14647 1828 aaKnown RBP21.48■■□□□ 1.03
SUDS3-203ENST00000541591 CHGAP10645 457 aaKnown RBP21.45■■□□□ 1.02
SUDS3-203ENST00000541591 HSPA1LP34931 641 aa21.45■■□□□ 1.02
SUDS3-203ENST00000541591 SLC26A8Q96RN1 970 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms