RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 ASTLQ6HA08 431 aaPredicted RBP7.67□□□□□ -1.18
SPARCL1-209ENST00000541496 ZNF467Q7Z7K2 595 aaPredicted RBP7.67□□□□□ -1.18
SPARCL1-209ENST00000541496 METRNQ9UJH8 293 aa7.66□□□□□ -1.18
SPARCL1-209ENST00000541496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.66□□□□□ -1.18
SPARCL1-209ENST00000541496 FGD6Q6ZV73 1430 aa7.66□□□□□ -1.18
SPARCL1-209ENST00000541496 POTEB2H3BUK9 544 aa7.65□□□□□ -1.18
SPARCL1-209ENST00000541496 TTC37Q6PGP7 1564 aa7.65□□□□□ -1.18
SPARCL1-209ENST00000541496 PPARGC1BQ86YN6 1023 aaKnown RBP7.65□□□□□ -1.18
SPARCL1-209ENST00000541496 TEX14Q8IWB6 1497 aa7.65□□□□□ -1.18
SPARCL1-209ENST00000541496 NEO1Q92859 1461 aa7.65□□□□□ -1.18
SPARCL1-209ENST00000541496 RRBP1Q9P2E9 1410 aaKnown RBP7.65□□□□□ -1.18
SPARCL1-209ENST00000541496 KIAA1107Q9UPP5 1409 aa7.65□□□□□ -1.18
SPARCL1-209ENST00000541496 SUPT6HQ7KZ85 1726 aaKnown RBP7.64□□□□□ -1.19
SPARCL1-209ENST00000541496 FANCAO15360 1455 aa7.64□□□□□ -1.19
SPARCL1-209ENST00000541496 PLEKHH2Q8IVE3 1493 aa7.64□□□□□ -1.19
SPARCL1-209ENST00000541496 TIE1P35590 1138 aa7.64□□□□□ -1.19
SPARCL1-209ENST00000541496 SLC39A7Q92504 469 aa7.64□□□□□ -1.19
SPARCL1-209ENST00000541496 TCOF1Q13428 1488 aaKnown RBP7.63□□□□□ -1.19
SPARCL1-209ENST00000541496 C7P10643 843 aa7.63□□□□□ -1.19
SPARCL1-209ENST00000541496 ATN1P54259 1190 aaPredicted RBP7.63□□□□□ -1.19
SPARCL1-209ENST00000541496 RSPH4AQ5TD94 716 aa7.63□□□□□ -1.19
SPARCL1-209ENST00000541496 OTUD5Q96G74 571 aa7.63□□□□□ -1.19
SPARCL1-209ENST00000541496 TRPC6Q9Y210 931 aa7.63□□□□□ -1.19
SPARCL1-209ENST00000541496 MAP3K4Q9Y6R4 1608 aa7.63□□□□□ -1.19
SPARCL1-209ENST00000541496 ARHGAP5Q13017 1502 aa7.62□□□□□ -1.19
SPARCL1-209ENST00000541496 AKNAQ7Z591 1439 aa7.62□□□□□ -1.19
SPARCL1-209ENST00000541496 ZNF644Q9H582 1327 aaPredicted RBP7.62□□□□□ -1.19
SPARCL1-209ENST00000541496 IFNL1Q8IU54 200 aa7.62□□□□□ -1.19
SPARCL1-209ENST00000541496 MBD5Q9P267 1494 aa7.62□□□□□ -1.19
SPARCL1-209ENST00000541496 PREX2Q70Z35 1606 aa7.61□□□□□ -1.19
SPARCL1-209ENST00000541496 BMP2KQ9NSY1 1161 aaPredicted RBP7.61□□□□□ -1.19
SPARCL1-209ENST00000541496 TAOK2Q9UL54 1235 aa7.6□□□□□ -1.19
SPARCL1-209ENST00000541496 ZNF777Q9ULD5 760 aaPredicted RBP7.6□□□□□ -1.19
SPARCL1-209ENST00000541496 ADGRL1O94910 1474 aa7.6□□□□□ -1.19
SPARCL1-209ENST00000541496 CAMSAP2Q08AD1 1489 aa7.6□□□□□ -1.19
SPARCL1-209ENST00000541496 SCAPERQ9BY12 1400 aa7.6□□□□□ -1.19
SPARCL1-209ENST00000541496 ABCC1P33527 1531 aa7.59□□□□□ -1.19
SPARCL1-209ENST00000541496 FAM50AQ14320 339 aaKnown RBP7.59□□□□□ -1.19
SPARCL1-209ENST00000541496 DENND4BO75064 1496 aaPredicted RBP7.59□□□□□ -1.19
SPARCL1-209ENST00000541496 POGZQ7Z3K3 1410 aa7.59□□□□□ -1.19
SPARCL1-209ENST00000541496 ARHGEF12Q9NZN5 1544 aa7.58□□□□□ -1.2
SPARCL1-209ENST00000541496 ITSN2Q9NZM3 1697 aa7.58□□□□□ -1.2
SPARCL1-209ENST00000541496 COL17A1Q9UMD9 1497 aaPredicted RBP7.58□□□□□ -1.2
SPARCL1-209ENST00000541496 HNRNPMP52272 730 aaKnown RBP eCLIP7.58□□□□□ -1.2
SPARCL1-209ENST00000541496 ABCC5O15440 1437 aa7.58□□□□□ -1.2
SPARCL1-209ENST00000541496 TRAPPC8Q9Y2L5 1435 aa7.58□□□□□ -1.2
SPARCL1-209ENST00000541496 SAMD9LQ8IVG5 1584 aa7.58□□□□□ -1.2
SPARCL1-209ENST00000541496 CFAP74Q9C0B2 1584 aa7.58□□□□□ -1.2
SPARCL1-209ENST00000541496 ZNF518AQ6AHZ1 1483 aa7.57□□□□□ -1.2
SPARCL1-209ENST00000541496 CCDC141Q6ZP82 1450 aa7.57□□□□□ -1.2
SPARCL1-209ENST00000541496 ECM2O94769 699 aaPredicted RBP7.57□□□□□ -1.2
SPARCL1-209ENST00000541496 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
SPARCL1-209ENST00000541496 AFAP1Q8N556 730 aa7.57□□□□□ -1.2
SPARCL1-209ENST00000541496 RTEL1-TNFRSF6BF6WH68 1400 aa7.57□□□□□ -1.2
SPARCL1-209ENST00000541496 DAPK1P53355 1430 aa7.57□□□□□ -1.2
SPARCL1-209ENST00000541496 PTPN23Q9H3S7 1636 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 SHANK2Q9UPX8 1470 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 CDC42BPAQ5VT25 1732 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 MYO5CQ9NQX4 1742 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 ARHGEF5Q12774 1597 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 TTLL13PA6NNM8 815 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 RAPGEF3O95398 923 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 TSPY4P0CV99 314 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 TSPY10P0CW01 314 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 PDAP1Q13442 181 aaKnown RBP7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 PKD2Q13563 968 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 PCDHB8Q9UN66 801 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 PPRC1Q5VV67 1664 aaKnown RBP7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 SYCP2Q9BX26 1530 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 ROCK1Q13464 1354 aa7.56□□□□□ -1.2
SPARCL1-209ENST00000541496 MAGI2Q86UL8 1455 aa7.55□□□□□ -1.2
SPARCL1-209ENST00000541496 MLH3Q9UHC1 1453 aa7.55□□□□□ -1.2
SPARCL1-209ENST00000541496 SPAG9O60271 1321 aaKnown RBP7.55□□□□□ -1.2
SPARCL1-209ENST00000541496 KIF13AQ9H1H9 1805 aa7.55□□□□□ -1.2
SPARCL1-209ENST00000541496 RIOK3O14730 519 aaKnown RBP7.55□□□□□ -1.2
SPARCL1-209ENST00000541496 TMEM106CQ9BVX2 250 aa7.55□□□□□ -1.2
SPARCL1-209ENST00000541496 CDC42BPBQ9Y5S2 1711 aa7.55□□□□□ -1.2
SPARCL1-209ENST00000541496 KDM5CP41229 1560 aa7.54□□□□□ -1.2
SPARCL1-209ENST00000541496 PTPRKQ15262 1439 aa7.54□□□□□ -1.2
SPARCL1-209ENST00000541496 C9orf84Q5VXU9 1444 aa7.54□□□□□ -1.2
SPARCL1-209ENST00000541496 SEC24BO95487 1268 aa7.54□□□□□ -1.2
SPARCL1-209ENST00000541496 ADGRL2O95490 1459 aa7.54□□□□□ -1.2
SPARCL1-209ENST00000541496 NCOA1Q15788 1441 aa7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 ZMYM4Q5VZL5 1548 aa7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 VGFO15240 615 aaPredicted RBP7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 POTEJP0CG39 1038 aa7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 PSEN1P49768 467 aa7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 IER5LQ5T953 404 aa7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 MAMSTRQ6ZN01 415 aa7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 TRIM35Q9UPQ4 493 aa7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 ANKRD30AQ9BXX3 1397 aa7.53□□□□□ -1.2
SPARCL1-209ENST00000541496 DNMT1P26358 1616 aaKnown RBP7.52□□□□□ -1.2
SPARCL1-209ENST00000541496 SCUBE2Q9NQ36 999 aa7.52□□□□□ -1.21
SPARCL1-209ENST00000541496 FRMPD1Q5SYB0 1578 aa7.51□□□□□ -1.21
SPARCL1-209ENST00000541496 MAST1Q9Y2H9 1570 aa7.51□□□□□ -1.21
SPARCL1-209ENST00000541496 ZFYVE16Q7Z3T8 1539 aa7.51□□□□□ -1.21
SPARCL1-209ENST00000541496 HFM1A2PYH4 1435 aa7.51□□□□□ -1.21
SPARCL1-209ENST00000541496 DHX29Q7Z478 1369 aaKnown RBP7.5□□□□□ -1.21
SPARCL1-209ENST00000541496 KIF15Q9NS87 1388 aa7.5□□□□□ -1.21
SPARCL1-209ENST00000541496 POTEFA5A3E0 1075 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms