RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ZNF518AQ6AHZ1 1483 aa17.66■□□□□ 0.42
AP003559.1-201ENST00000540906 NEO1Q92859 1461 aa17.66■□□□□ 0.42
AP003559.1-201ENST00000540906 PPRC1Q5VV67 1664 aaKnown RBP17.64■□□□□ 0.41
AP003559.1-201ENST00000540906 DEPDC5O75140 1603 aa17.63■□□□□ 0.41
AP003559.1-201ENST00000540906 PLA2R1Q13018 1463 aa17.62■□□□□ 0.41
AP003559.1-201ENST00000540906 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
AP003559.1-201ENST00000540906 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
AP003559.1-201ENST00000540906 TSPOAP1O95153 1857 aa17.62■□□□□ 0.41
AP003559.1-201ENST00000540906 MROH1Q8NDA8 1641 aa17.61■□□□□ 0.41
AP003559.1-201ENST00000540906 FRMPD1Q5SYB0 1578 aa17.61■□□□□ 0.41
AP003559.1-201ENST00000540906 HECW2Q9P2P5 1572 aa17.61■□□□□ 0.41
AP003559.1-201ENST00000540906 RICTORQ6R327 1708 aa17.61■□□□□ 0.41
AP003559.1-201ENST00000540906 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
AP003559.1-201ENST00000540906 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
AP003559.1-201ENST00000540906 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
AP003559.1-201ENST00000540906 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
AP003559.1-201ENST00000540906 MLH3Q9UHC1 1453 aa17.6■□□□□ 0.41
AP003559.1-201ENST00000540906 KIF13AQ9H1H9 1805 aa17.58■□□□□ 0.4
AP003559.1-201ENST00000540906 EIF2AK4Q9P2K8 1649 aaKnown RBP17.58■□□□□ 0.4
AP003559.1-201ENST00000540906 VWDEQ8N2E2 1590 aa17.58■□□□□ 0.4
AP003559.1-201ENST00000540906 E9PCH4 1651 aa17.57■□□□□ 0.4
AP003559.1-201ENST00000540906 KIF3BO15066 747 aa17.56■□□□□ 0.4
AP003559.1-201ENST00000540906 A2MP01023 1474 aa17.56■□□□□ 0.4
AP003559.1-201ENST00000540906 PRDM15P57071 1507 aaPredicted RBP17.55■□□□□ 0.4
AP003559.1-201ENST00000540906 DIP2CQ9Y2E4 1556 aa17.54■□□□□ 0.4
AP003559.1-201ENST00000540906 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.4
AP003559.1-201ENST00000540906 RNF17Q9BXT8 1623 aaKnown RBP17.52■□□□□ 0.4
AP003559.1-201ENST00000540906 TET3O43151 1660 aa17.52■□□□□ 0.39
AP003559.1-201ENST00000540906 ATP10AO60312 1499 aa17.5■□□□□ 0.39
AP003559.1-201ENST00000540906 CEP152O94986 1710 aa17.49■□□□□ 0.39
AP003559.1-201ENST00000540906 CCDC144AA2RUR9 1427 aa17.49■□□□□ 0.39
AP003559.1-201ENST00000540906 MIER1Q8N108 512 aa17.48■□□□□ 0.39
AP003559.1-201ENST00000540906 BCORL1Q5H9F3 1711 aa17.48■□□□□ 0.39
AP003559.1-201ENST00000540906 SPHKAPQ2M3C7 1700 aa17.46■□□□□ 0.39
AP003559.1-201ENST00000540906 HSPA5P11021 654 aaKnown RBP17.46■□□□□ 0.39
AP003559.1-201ENST00000540906 ZMYM4Q5VZL5 1548 aa17.46■□□□□ 0.39
AP003559.1-201ENST00000540906 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
AP003559.1-201ENST00000540906 KANK1Q14678 1352 aa17.45■□□□□ 0.38
AP003559.1-201ENST00000540906 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
AP003559.1-201ENST00000540906 CLTCL1P53675 1640 aa17.45■□□□□ 0.38
AP003559.1-201ENST00000540906 TRPM2O94759 1503 aa17.45■□□□□ 0.38
AP003559.1-201ENST00000540906 PTPRTO14522 1441 aa17.45■□□□□ 0.38
AP003559.1-201ENST00000540906 UHRF1BP1Q6BDS2 1440 aa17.45■□□□□ 0.38
AP003559.1-201ENST00000540906 EFCAB6Q5THR3 1501 aa17.44■□□□□ 0.38
AP003559.1-201ENST00000540906 LMTK2Q8IWU2 1503 aa17.44■□□□□ 0.38
AP003559.1-201ENST00000540906 KDM2AQ9Y2K7 1162 aa17.43■□□□□ 0.38
AP003559.1-201ENST00000540906 UGGT1Q9NYU2 1555 aa17.42■□□□□ 0.38
AP003559.1-201ENST00000540906 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
AP003559.1-201ENST00000540906 GGT6Q6P531 493 aa17.42■□□□□ 0.38
AP003559.1-201ENST00000540906 DCAF11Q8TEB1 546 aa17.42■□□□□ 0.38
AP003559.1-201ENST00000540906 SIGLEC1Q9BZZ2 1709 aa17.41■□□□□ 0.38
AP003559.1-201ENST00000540906 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
AP003559.1-201ENST00000540906 ABCC3O15438 1527 aa17.4■□□□□ 0.38
AP003559.1-201ENST00000540906 RALGAPBQ86X10 1494 aa17.39■□□□□ 0.37
AP003559.1-201ENST00000540906 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
AP003559.1-201ENST00000540906 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
AP003559.1-201ENST00000540906 C11orf95C9JLR9 678 aaPredicted RBP17.37■□□□□ 0.37
AP003559.1-201ENST00000540906 NPATQ14207 1427 aa17.37■□□□□ 0.37
AP003559.1-201ENST00000540906 PRAG1Q86YV5 1406 aa17.37■□□□□ 0.37
AP003559.1-201ENST00000540906 CFAP65Q6ZU64 1925 aaKnown RBP17.36■□□□□ 0.37
AP003559.1-201ENST00000540906 CAMSAP1Q5T5Y3 1602 aa17.36■□□□□ 0.37
AP003559.1-201ENST00000540906 TRPM1Q7Z4N2 1603 aa17.35■□□□□ 0.37
AP003559.1-201ENST00000540906 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
AP003559.1-201ENST00000540906 MROH2AA6NES4 1674 aa17.33■□□□□ 0.36
AP003559.1-201ENST00000540906 WASHC2CQ9Y4E1 1318 aa17.32■□□□□ 0.36
AP003559.1-201ENST00000540906 USP47Q96K76 1375 aa17.32■□□□□ 0.36
AP003559.1-201ENST00000540906 ARHGEF40Q8TER5 1519 aa17.3■□□□□ 0.36
AP003559.1-201ENST00000540906 REREQ9P2R6 1566 aa17.3■□□□□ 0.36
AP003559.1-201ENST00000540906 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
AP003559.1-201ENST00000540906 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
AP003559.1-201ENST00000540906 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
AP003559.1-201ENST00000540906 SYNMO15061 1565 aa17.28■□□□□ 0.36
AP003559.1-201ENST00000540906 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
AP003559.1-201ENST00000540906 KIF1BO60333 1816 aa17.27■□□□□ 0.36
AP003559.1-201ENST00000540906 AGLP35573 1532 aa17.27■□□□□ 0.35
AP003559.1-201ENST00000540906 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
AP003559.1-201ENST00000540906 CCDC7Q96M83 1385 aa17.26■□□□□ 0.35
AP003559.1-201ENST00000540906 NOS1P29475 1434 aa17.26■□□□□ 0.35
AP003559.1-201ENST00000540906 NEURL4Q96JN8 1562 aa17.26■□□□□ 0.35
AP003559.1-201ENST00000540906 ADGRB3O60242 1522 aa17.25■□□□□ 0.35
AP003559.1-201ENST00000540906 POLR1AO95602 1720 aaPredicted RBP17.25■□□□□ 0.35
AP003559.1-201ENST00000540906 IFT172Q9UG01 1749 aa17.25■□□□□ 0.35
AP003559.1-201ENST00000540906 CNTLNQ9NXG0 1405 aa17.24■□□□□ 0.35
AP003559.1-201ENST00000540906 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
AP003559.1-201ENST00000540906 KIF7Q2M1P5 1343 aa17.24■□□□□ 0.35
AP003559.1-201ENST00000540906 ARHGAP31Q2M1Z3 1444 aa17.23■□□□□ 0.35
AP003559.1-201ENST00000540906 PIK3C2BO00750 1634 aa17.23■□□□□ 0.35
AP003559.1-201ENST00000540906 LAMC1P11047 1609 aa17.22■□□□□ 0.35
AP003559.1-201ENST00000540906 CLTCQ00610 1675 aaKnown RBP17.21■□□□□ 0.35
AP003559.1-201ENST00000540906 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.35
AP003559.1-201ENST00000540906 ST20-MTHFSA0A0A6YYL1 179 aa17.21■□□□□ 0.35
AP003559.1-201ENST00000540906 MLECQ14165 292 aa17.2■□□□□ 0.34
AP003559.1-201ENST00000540906 ADGRF5Q8IZF2 1346 aa17.19■□□□□ 0.34
AP003559.1-201ENST00000540906 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
AP003559.1-201ENST00000540906 MYOM2P54296 1465 aa17.18■□□□□ 0.34
AP003559.1-201ENST00000540906 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
AP003559.1-201ENST00000540906 YTHDC1Q96MU7 727 aaKnown RBP17.18■□□□□ 0.34
AP003559.1-201ENST00000540906 PPLO60437 1756 aa17.17■□□□□ 0.34
AP003559.1-201ENST00000540906 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
AP003559.1-201ENST00000540906 MYO5BQ9ULV0 1848 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms