RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 WASHC2CQ9Y4E1 1318 aa22.77■■□□□ 1.24
MSRB3-209ENST00000540804 APLP2Q06481 763 aa22.76■■□□□ 1.23
MSRB3-209ENST00000540804 CEP170BQ9Y4F5 1589 aaPredicted RBP22.75■■□□□ 1.23
MSRB3-209ENST00000540804 KDM5DQ9BY66 1539 aa22.74■■□□□ 1.23
MSRB3-209ENST00000540804 MAST1Q9Y2H9 1570 aa22.73■■□□□ 1.23
MSRB3-209ENST00000540804 ZNF142P52746 1687 aaPredicted RBP22.71■■□□□ 1.23
MSRB3-209ENST00000540804 TNRQ92752 1358 aa22.71■■□□□ 1.23
MSRB3-209ENST00000540804 PZPP20742 1482 aa22.7■■□□□ 1.22
MSRB3-209ENST00000540804 ABCC5O15440 1437 aa22.69■■□□□ 1.22
MSRB3-209ENST00000540804 LTBP4Q8N2S1 1624 aa22.68■■□□□ 1.22
MSRB3-209ENST00000540804 A2ML1A8K2U0 1454 aa22.68■■□□□ 1.22
MSRB3-209ENST00000540804 PTPN23Q9H3S7 1636 aa22.67■■□□□ 1.22
MSRB3-209ENST00000540804 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
MSRB3-209ENST00000540804 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
MSRB3-209ENST00000540804 ZNF335Q9H4Z2 1342 aaPredicted RBP22.66■■□□□ 1.22
MSRB3-209ENST00000540804 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
MSRB3-209ENST00000540804 DNMT1P26358 1616 aaKnown RBP22.66■■□□□ 1.22
MSRB3-209ENST00000540804 PKD2Q13563 968 aa22.65■■□□□ 1.22
MSRB3-209ENST00000540804 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
MSRB3-209ENST00000540804 ABCC3O15438 1527 aa22.64■■□□□ 1.21
MSRB3-209ENST00000540804 MROH1Q8NDA8 1641 aa22.64■■□□□ 1.21
MSRB3-209ENST00000540804 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.21
MSRB3-209ENST00000540804 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
MSRB3-209ENST00000540804 CHIC2Q9UKJ5 165 aa22.63■■□□□ 1.21
MSRB3-209ENST00000540804 DAPK1P53355 1430 aa22.63■■□□□ 1.21
MSRB3-209ENST00000540804 KIF15Q9NS87 1388 aa22.63■■□□□ 1.21
MSRB3-209ENST00000540804 DUOX2Q9NRD8 1548 aa22.61■■□□□ 1.21
MSRB3-209ENST00000540804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.6■■□□□ 1.21
MSRB3-209ENST00000540804 EIF2AK4Q9P2K8 1649 aaKnown RBP22.6■■□□□ 1.21
MSRB3-209ENST00000540804 SHANK2Q9UPX8 1470 aa22.59■■□□□ 1.21
MSRB3-209ENST00000540804 CROCC2H7BZ55 1655 aa22.58■■□□□ 1.2
MSRB3-209ENST00000540804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.57■■□□□ 1.2
MSRB3-209ENST00000540804 NEURL4Q96JN8 1562 aa22.55■■□□□ 1.2
MSRB3-209ENST00000540804 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
MSRB3-209ENST00000540804 CEP152O94986 1710 aa22.54■■□□□ 1.2
MSRB3-209ENST00000540804 UGGT1Q9NYU2 1555 aa22.54■■□□□ 1.2
MSRB3-209ENST00000540804 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
MSRB3-209ENST00000540804 ZC3H13Q5T200 1668 aaKnown RBP22.53■■□□□ 1.2
MSRB3-209ENST00000540804 FAM50AQ14320 339 aaKnown RBP22.53■■□□□ 1.2
MSRB3-209ENST00000540804 THEMISQ8N1K5 641 aaPredicted RBP22.53■■□□□ 1.2
MSRB3-209ENST00000540804 ERBINQ96RT1 1412 aa22.53■■□□□ 1.2
MSRB3-209ENST00000540804 SPATA31D1Q6ZQQ2 1576 aa22.53■■□□□ 1.2
MSRB3-209ENST00000540804 ANKLE2Q86XL3 938 aa22.51■■□□□ 1.19
MSRB3-209ENST00000540804 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
MSRB3-209ENST00000540804 PRDM15P57071 1507 aaPredicted RBP22.49■■□□□ 1.19
MSRB3-209ENST00000540804 IQSEC2Q5JU85 1478 aa22.47■■□□□ 1.19
MSRB3-209ENST00000540804 PPARGC1BQ86YN6 1023 aaKnown RBP22.47■■□□□ 1.19
MSRB3-209ENST00000540804 POLR1AO95602 1720 aaPredicted RBP22.47■■□□□ 1.19
MSRB3-209ENST00000540804 UBAP1LF5GYI3 381 aa22.45■■□□□ 1.18
MSRB3-209ENST00000540804 NPHP4O75161 1426 aaPredicted RBP22.45■■□□□ 1.18
MSRB3-209ENST00000540804 DEPDC5O75140 1603 aa22.43■■□□□ 1.18
MSRB3-209ENST00000540804 ARHGAP31Q2M1Z3 1444 aa22.43■■□□□ 1.18
MSRB3-209ENST00000540804 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
MSRB3-209ENST00000540804 KANK1Q14678 1352 aa22.41■■□□□ 1.18
MSRB3-209ENST00000540804 MED14O60244 1454 aa22.41■■□□□ 1.18
MSRB3-209ENST00000540804 CFAP65Q6ZU64 1925 aaKnown RBP22.4■■□□□ 1.18
MSRB3-209ENST00000540804 VWDEQ8N2E2 1590 aa22.39■■□□□ 1.18
MSRB3-209ENST00000540804 UBR1Q8IWV7 1749 aa22.38■■□□□ 1.17
MSRB3-209ENST00000540804 LTKP29376 864 aa22.38■■□□□ 1.17
MSRB3-209ENST00000540804 LMTK2Q8IWU2 1503 aa22.36■■□□□ 1.17
MSRB3-209ENST00000540804 ANKRD50Q9ULJ7 1429 aa22.35■■□□□ 1.17
MSRB3-209ENST00000540804 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
MSRB3-209ENST00000540804 IDI1Q13907 227 aa22.34■■□□□ 1.17
MSRB3-209ENST00000540804 TXNDC2Q86VQ3 553 aa22.34■■□□□ 1.17
MSRB3-209ENST00000540804 CPS1P31327 1500 aa22.34■■□□□ 1.17
MSRB3-209ENST00000540804 PIK3C2BO00750 1634 aa22.33■■□□□ 1.17
MSRB3-209ENST00000540804 ITGAEP38570 1179 aa22.33■■□□□ 1.17
MSRB3-209ENST00000540804 PIP4K2BP78356 416 aa22.32■■□□□ 1.16
MSRB3-209ENST00000540804 DISP3Q9P2K9 1392 aa22.32■■□□□ 1.16
MSRB3-209ENST00000540804 SCAF11Q99590 1463 aaKnown RBP22.32■■□□□ 1.16
MSRB3-209ENST00000540804 ARHGAP23Q9P227 1491 aa22.32■■□□□ 1.16
MSRB3-209ENST00000540804 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
MSRB3-209ENST00000540804 SYNMO15061 1565 aa22.31■■□□□ 1.16
MSRB3-209ENST00000540804 STAG3Q9UJ98 1225 aa22.3■■□□□ 1.16
MSRB3-209ENST00000540804 SLIT1O75093 1534 aa22.3■■□□□ 1.16
MSRB3-209ENST00000540804 EFCAB6Q5THR3 1501 aa22.3■■□□□ 1.16
MSRB3-209ENST00000540804 NOS1P29475 1434 aa22.29■■□□□ 1.16
MSRB3-209ENST00000540804 STRCP1A6NGW2 1772 aa22.28■■□□□ 1.16
MSRB3-209ENST00000540804 TMEM2Q9UHN6 1383 aa22.27■■□□□ 1.16
MSRB3-209ENST00000540804 EID1Q9Y6B2 187 aa22.26■■□□□ 1.15
MSRB3-209ENST00000540804 ILDR2Q71H61 639 aa22.25■■□□□ 1.15
MSRB3-209ENST00000540804 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
MSRB3-209ENST00000540804 LRRC7Q96NW7 1537 aa22.25■■□□□ 1.15
MSRB3-209ENST00000540804 TOM1O60784 492 aa22.24■■□□□ 1.15
MSRB3-209ENST00000540804 HSPA1LP34931 641 aa22.23■■□□□ 1.15
MSRB3-209ENST00000540804 ALKQ9UM73 1620 aa22.23■■□□□ 1.15
MSRB3-209ENST00000540804 ROCK1Q13464 1354 aa22.21■■□□□ 1.15
MSRB3-209ENST00000540804 SLC26A8Q96RN1 970 aa22.19■■□□□ 1.14
MSRB3-209ENST00000540804 ADGRB3O60242 1522 aa22.19■■□□□ 1.14
MSRB3-209ENST00000540804 UNC13BO14795 1591 aa22.19■■□□□ 1.14
MSRB3-209ENST00000540804 SLC52A1Q9NWF4 448 aa22.18■■□□□ 1.14
MSRB3-209ENST00000540804 RPRD2Q5VT52 1461 aaKnown RBP22.17■■□□□ 1.14
MSRB3-209ENST00000540804 TET3O43151 1660 aa22.17■■□□□ 1.14
MSRB3-209ENST00000540804 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
MSRB3-209ENST00000540804 NUP155O75694 1391 aa22.14■■□□□ 1.14
MSRB3-209ENST00000540804 KDM5AP29375 1690 aaKnown RBP22.14■■□□□ 1.14
MSRB3-209ENST00000540804 CHGAP10645 457 aaKnown RBP22.14■■□□□ 1.13
MSRB3-209ENST00000540804 BCANQ96GW7 911 aa22.12■■□□□ 1.13
MSRB3-209ENST00000540804 E9PCH4 1651 aa22.11■■□□□ 1.13
MSRB3-209ENST00000540804 NUTM2DQ5VT03 806 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms