RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PTPN23Q9H3S7 1636 aa16.08■□□□□ 0.17
CDCA3-208ENST00000540683 PTPRTO14522 1441 aa16.08■□□□□ 0.16
CDCA3-208ENST00000540683 DUOX2Q9NRD8 1548 aa16.08■□□□□ 0.16
CDCA3-208ENST00000540683 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.16
CDCA3-208ENST00000540683 PTPRKQ15262 1439 aa16.07■□□□□ 0.16
CDCA3-208ENST00000540683 FGD6Q6ZV73 1430 aa16.07■□□□□ 0.16
CDCA3-208ENST00000540683 ZNF142P52746 1687 aaPredicted RBP16.06■□□□□ 0.16
CDCA3-208ENST00000540683 PKD2Q13563 968 aa16.06■□□□□ 0.16
CDCA3-208ENST00000540683 PZPP20742 1482 aa16.05■□□□□ 0.16
CDCA3-208ENST00000540683 MYO3AQ8NEV4 1616 aa16.05■□□□□ 0.16
CDCA3-208ENST00000540683 RNF17Q9BXT8 1623 aaKnown RBP16.05■□□□□ 0.16
CDCA3-208ENST00000540683 PLA2R1Q13018 1463 aa16.04■□□□□ 0.16
CDCA3-208ENST00000540683 TCOF1Q13428 1488 aaKnown RBP16.04■□□□□ 0.16
CDCA3-208ENST00000540683 ERBINQ96RT1 1412 aa16.04■□□□□ 0.16
CDCA3-208ENST00000540683 CROCC2H7BZ55 1655 aa16.04■□□□□ 0.16
CDCA3-208ENST00000540683 NCOA1Q15788 1441 aa16.03■□□□□ 0.16
CDCA3-208ENST00000540683 ANKRD30AQ9BXX3 1397 aa16.03■□□□□ 0.16
CDCA3-208ENST00000540683 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
CDCA3-208ENST00000540683 CEP170BQ9Y4F5 1589 aaPredicted RBP16.03■□□□□ 0.16
CDCA3-208ENST00000540683 A2ML1A8K2U0 1454 aa16.03■□□□□ 0.16
CDCA3-208ENST00000540683 STRCQ7RTU9 1775 aa16.03■□□□□ 0.16
CDCA3-208ENST00000540683 KANK1Q14678 1352 aa16.02■□□□□ 0.16
CDCA3-208ENST00000540683 CAMSAP1Q5T5Y3 1602 aa16.02■□□□□ 0.16
CDCA3-208ENST00000540683 DAPK1P53355 1430 aa16.02■□□□□ 0.15
CDCA3-208ENST00000540683 TNRQ92752 1358 aa16.01■□□□□ 0.15
CDCA3-208ENST00000540683 KIF15Q9NS87 1388 aa16.01■□□□□ 0.15
CDCA3-208ENST00000540683 CERKQ8TCT0 537 aa16.01■□□□□ 0.15
CDCA3-208ENST00000540683 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
CDCA3-208ENST00000540683 ABCC5O15440 1437 aa16■□□□□ 0.15
CDCA3-208ENST00000540683 THEMISQ8N1K5 641 aaPredicted RBP15.98■□□□□ 0.15
CDCA3-208ENST00000540683 ABCC3O15438 1527 aa15.96■□□□□ 0.15
CDCA3-208ENST00000540683 FAM50AQ14320 339 aaKnown RBP15.96■□□□□ 0.15
CDCA3-208ENST00000540683 RRP7BPQ9NSQ0 103 aa15.96■□□□□ 0.15
CDCA3-208ENST00000540683 IQSEC2Q5JU85 1478 aa15.95■□□□□ 0.14
CDCA3-208ENST00000540683 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
CDCA3-208ENST00000540683 ADRA2BP18089 450 aa15.94■□□□□ 0.14
CDCA3-208ENST00000540683 ARHGAP31Q2M1Z3 1444 aa15.94■□□□□ 0.14
CDCA3-208ENST00000540683 ADGRL2O95490 1459 aa15.93■□□□□ 0.14
CDCA3-208ENST00000540683 ANKLE2Q86XL3 938 aa15.93■□□□□ 0.14
CDCA3-208ENST00000540683 SPATA31D1Q6ZQQ2 1576 aa15.92■□□□□ 0.14
CDCA3-208ENST00000540683 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
CDCA3-208ENST00000540683 DEPDC5O75140 1603 aa15.91■□□□□ 0.14
CDCA3-208ENST00000540683 FBXO31Q5XUX0 539 aaPredicted RBP15.91■□□□□ 0.14
CDCA3-208ENST00000540683 POLR1AO95602 1720 aaPredicted RBP15.9■□□□□ 0.14
CDCA3-208ENST00000540683 NCKAP5LQ9HCH0 1330 aa15.9■□□□□ 0.14
CDCA3-208ENST00000540683 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
CDCA3-208ENST00000540683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.89■□□□□ 0.137e-9■■■□□ 17.5
CDCA3-208ENST00000540683 CHIC2Q9UKJ5 165 aa15.89■□□□□ 0.13
CDCA3-208ENST00000540683 ERVK-7P63135 1459 aa15.89■□□□□ 0.13
CDCA3-208ENST00000540683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDCA3-208ENST00000540683 CEP152O94986 1710 aa15.88■□□□□ 0.13
CDCA3-208ENST00000540683 LMTK2Q8IWU2 1503 aa15.87■□□□□ 0.13
CDCA3-208ENST00000540683 ROCK1Q13464 1354 aa15.87■□□□□ 0.13
CDCA3-208ENST00000540683 ANKRD50Q9ULJ7 1429 aa15.86■□□□□ 0.13
CDCA3-208ENST00000540683 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
CDCA3-208ENST00000540683 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
CDCA3-208ENST00000540683 RPRD2Q5VT52 1461 aaKnown RBP15.84■□□□□ 0.13
CDCA3-208ENST00000540683 LTBP4Q8N2S1 1624 aa15.83■□□□□ 0.13
CDCA3-208ENST00000540683 MED14O60244 1454 aa15.83■□□□□ 0.12
CDCA3-208ENST00000540683 CPS1P31327 1500 aa15.83■□□□□ 0.12
CDCA3-208ENST00000540683 VWDEQ8N2E2 1590 aa15.82■□□□□ 0.12
CDCA3-208ENST00000540683 KDM5AP29375 1690 aaKnown RBP15.82■□□□□ 0.12
CDCA3-208ENST00000540683 NPHP4O75161 1426 aaPredicted RBP15.81■□□□□ 0.12
CDCA3-208ENST00000540683 SLC52A1Q9NWF4 448 aa15.81■□□□□ 0.12
CDCA3-208ENST00000540683 CFAP65Q6ZU64 1925 aaKnown RBP15.8■□□□□ 0.12
CDCA3-208ENST00000540683 EFCAB6Q5THR3 1501 aa15.79■□□□□ 0.12
CDCA3-208ENST00000540683 ZNF335Q9H4Z2 1342 aaPredicted RBP15.79■□□□□ 0.12
CDCA3-208ENST00000540683 HDGFP51858 240 aaKnown RBP15.79■□□□□ 0.12
CDCA3-208ENST00000540683 UBR1Q8IWV7 1749 aa15.79■□□□□ 0.12
CDCA3-208ENST00000540683 IQGAP1P46940 1657 aa15.78■□□□□ 0.12
CDCA3-208ENST00000540683 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
CDCA3-208ENST00000540683 NEURL4Q96JN8 1562 aa15.77■□□□□ 0.11
CDCA3-208ENST00000540683 SLIT1O75093 1534 aa15.77■□□□□ 0.11
CDCA3-208ENST00000540683 TET3O43151 1660 aa15.76■□□□□ 0.11
CDCA3-208ENST00000540683 UNC13BO14795 1591 aa15.75■□□□□ 0.11
CDCA3-208ENST00000540683 TXNDC2Q86VQ3 553 aa15.75■□□□□ 0.11
CDCA3-208ENST00000540683 GCC2Q8IWJ2 1684 aa15.75■□□□□ 0.11
CDCA3-208ENST00000540683 TOM1O60784 492 aa15.74■□□□□ 0.11
CDCA3-208ENST00000540683 KCNA4P22459 653 aa15.74■□□□□ 0.11
CDCA3-208ENST00000540683 NOS1P29475 1434 aa15.74■□□□□ 0.11
CDCA3-208ENST00000540683 ARHGAP23Q9P227 1491 aa15.73■□□□□ 0.11
CDCA3-208ENST00000540683 TMEM2Q9UHN6 1383 aa15.73■□□□□ 0.11
CDCA3-208ENST00000540683 PIK3C2BO00750 1634 aa15.72■□□□□ 0.11
CDCA3-208ENST00000540683 UBAP1LF5GYI3 381 aa15.72■□□□□ 0.11
CDCA3-208ENST00000540683 RRBP1Q9P2E9 1410 aaKnown RBP15.71■□□□□ 0.11
CDCA3-208ENST00000540683 ITGAEP38570 1179 aa15.71■□□□□ 0.11
CDCA3-208ENST00000540683 IDI1Q13907 227 aa15.71■□□□□ 0.11
CDCA3-208ENST00000540683 ADGRB3O60242 1522 aa15.7■□□□□ 0.1
CDCA3-208ENST00000540683 IQGAP3Q86VI3 1631 aa15.7■□□□□ 0.1
CDCA3-208ENST00000540683 SYNMO15061 1565 aa15.7■□□□□ 0.1
CDCA3-208ENST00000540683 NUP155O75694 1391 aa15.69■□□□□ 0.1
CDCA3-208ENST00000540683 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
CDCA3-208ENST00000540683 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.68■□□□□ 0.1
CDCA3-208ENST00000540683 PPP1R15AO75807 674 aaPredicted RBP15.65■□□□□ 0.1
CDCA3-208ENST00000540683 FOXD1Q16676 465 aa15.65■□□□□ 0.1
CDCA3-208ENST00000540683 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
CDCA3-208ENST00000540683 LTKP29376 864 aa15.64■□□□□ 0.09
CDCA3-208ENST00000540683 BCANQ96GW7 911 aa15.64■□□□□ 0.09
CDCA3-208ENST00000540683 E9PCH4 1651 aa15.62■□□□□ 0.09
CDCA3-208ENST00000540683 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms