RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 PLA2R1Q13018 1463 aa13.38□□□□□ -0.27
LCOR-209ENST00000540664 ZFYVE16Q7Z3T8 1539 aa13.38□□□□□ -0.27
LCOR-209ENST00000540664 INO80Q9ULG1 1556 aaPredicted RBP13.35□□□□□ -0.27
LCOR-209ENST00000540664 BCORL1Q5H9F3 1711 aa13.35□□□□□ -0.27
LCOR-209ENST00000540664 USP47Q96K76 1375 aa13.34□□□□□ -0.27
LCOR-209ENST00000540664 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
LCOR-209ENST00000540664 FANCAO15360 1455 aa13.34□□□□□ -0.27
LCOR-209ENST00000540664 KIF7Q2M1P5 1343 aa13.34□□□□□ -0.27
LCOR-209ENST00000540664 CCDC144AA2RUR9 1427 aa13.34□□□□□ -0.27
LCOR-209ENST00000540664 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
LCOR-209ENST00000540664 ARID4BQ4LE39 1312 aaPredicted RBP13.32□□□□□ -0.28
LCOR-209ENST00000540664 TRPM1Q7Z4N2 1603 aa13.31□□□□□ -0.28
LCOR-209ENST00000540664 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
LCOR-209ENST00000540664 ATP7AQ04656 1500 aa13.31□□□□□ -0.28
LCOR-209ENST00000540664 VWDEQ8N2E2 1590 aa13.29□□□□□ -0.28
LCOR-209ENST00000540664 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
LCOR-209ENST00000540664 EIF2AK4Q9P2K8 1649 aaKnown RBP13.29□□□□□ -0.28
LCOR-209ENST00000540664 A2MP01023 1474 aa13.29□□□□□ -0.28
LCOR-209ENST00000540664 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
LCOR-209ENST00000540664 E9PCH4 1651 aa13.29□□□□□ -0.28
LCOR-209ENST00000540664 LAMC1P11047 1609 aa13.29□□□□□ -0.28
LCOR-209ENST00000540664 ADGRL1O94910 1474 aa13.28□□□□□ -0.28
LCOR-209ENST00000540664 ZNF326Q5BKZ1 582 aaKnown RBP13.28□□□□□ -0.28
LCOR-209ENST00000540664 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
LCOR-209ENST00000540664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.289e-7■■■□□ 14.7
LCOR-209ENST00000540664 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
LCOR-209ENST00000540664 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 RIMBP3CA6NJZ7 1639 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 RIMBP3BA6NNM3 1639 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 RIMBP3Q9UFD9 1639 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 GPRASP1Q5JY77 1395 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 CFAP74Q9C0B2 1584 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 TET3O43151 1660 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 MSH5O43196 834 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 TRPM2O94759 1503 aa13.26□□□□□ -0.29
LCOR-209ENST00000540664 CARD11Q9BXL7 1154 aa13.25□□□□□ -0.29
LCOR-209ENST00000540664 PTPRTO14522 1441 aa13.25□□□□□ -0.29
LCOR-209ENST00000540664 PRDM15P57071 1507 aaPredicted RBP13.25□□□□□ -0.29
LCOR-209ENST00000540664 DHX29Q7Z478 1369 aaKnown RBP13.25□□□□□ -0.29
LCOR-209ENST00000540664 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
LCOR-209ENST00000540664 KIDINS220Q9ULH0 1771 aa13.24□□□□□ -0.29
LCOR-209ENST00000540664 SPHKAPQ2M3C7 1700 aa13.24□□□□□ -0.29
LCOR-209ENST00000540664 CD109Q6YHK3 1445 aa13.24□□□□□ -0.29
LCOR-209ENST00000540664 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
LCOR-209ENST00000540664 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
LCOR-209ENST00000540664 CEP152O94986 1710 aa13.23□□□□□ -0.29
LCOR-209ENST00000540664 ZNF518AQ6AHZ1 1483 aa13.22□□□□□ -0.29
LCOR-209ENST00000540664 RNF17Q9BXT8 1623 aaKnown RBP13.22□□□□□ -0.29
LCOR-209ENST00000540664 NEURL4Q96JN8 1562 aa13.22□□□□□ -0.29
LCOR-209ENST00000540664 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
LCOR-209ENST00000540664 ST20-MTHFSA0A0A6YYL1 179 aa13.2□□□□□ -0.3
LCOR-209ENST00000540664 CLTCL1P53675 1640 aa13.2□□□□□ -0.3
LCOR-209ENST00000540664 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
LCOR-209ENST00000540664 MADDQ8WXG6 1647 aa13.19□□□□□ -0.3
LCOR-209ENST00000540664 POGZQ7Z3K3 1410 aa13.19□□□□□ -0.3
LCOR-209ENST00000540664 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
LCOR-209ENST00000540664 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
LCOR-209ENST00000540664 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
LCOR-209ENST00000540664 KANK1Q14678 1352 aa13.18□□□□□ -0.3
LCOR-209ENST00000540664 MLH3Q9UHC1 1453 aa13.18□□□□□ -0.3
LCOR-209ENST00000540664 MAP3K4Q9Y6R4 1608 aa13.17□□□□□ -0.3
LCOR-209ENST00000540664 EFCAB6Q5THR3 1501 aa13.17□□□□□ -0.3
LCOR-209ENST00000540664 NBPF1Q3BBV0 1214 aa13.16□□□□□ -0.3
LCOR-209ENST00000540664 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
LCOR-209ENST00000540664 NEO1Q92859 1461 aa13.16□□□□□ -0.3
LCOR-209ENST00000540664 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
LCOR-209ENST00000540664 FRMPD1Q5SYB0 1578 aa13.16□□□□□ -0.3
LCOR-209ENST00000540664 GLI2P10070 1586 aa13.15□□□□□ -0.3
LCOR-209ENST00000540664 HECW2Q9P2P5 1572 aa13.15□□□□□ -0.3
LCOR-209ENST00000540664 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
LCOR-209ENST00000540664 KIF3BO15066 747 aa13.15□□□□□ -0.31
LCOR-209ENST00000540664 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
LCOR-209ENST00000540664 IQGAP1P46940 1657 aa13.13□□□□□ -0.31
LCOR-209ENST00000540664 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
LCOR-209ENST00000540664 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
LCOR-209ENST00000540664 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
LCOR-209ENST00000540664 KTN1Q86UP2 1357 aaKnown RBP13.12□□□□□ -0.31
LCOR-209ENST00000540664 TESK2Q96S53 571 aa13.12□□□□□ -0.31
LCOR-209ENST00000540664 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
LCOR-209ENST00000540664 ABCA6Q8N139 1617 aa13.12□□□□□ -0.31
LCOR-209ENST00000540664 DIP2BQ9P265 1576 aa13.1□□□□□ -0.31
LCOR-209ENST00000540664 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
LCOR-209ENST00000540664 MYOM2P54296 1465 aa13.1□□□□□ -0.31
LCOR-209ENST00000540664 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
LCOR-209ENST00000540664 POLR3GLQ9BT43 218 aa13.09□□□□□ -0.31
LCOR-209ENST00000540664 KIF1BO60333 1816 aa13.09□□□□□ -0.31
LCOR-209ENST00000540664 DISP3Q9P2K9 1392 aa13.08□□□□□ -0.32
LCOR-209ENST00000540664 UGGT1Q9NYU2 1555 aa13.08□□□□□ -0.32
LCOR-209ENST00000540664 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
LCOR-209ENST00000540664 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
LCOR-209ENST00000540664 DIP2CQ9Y2E4 1556 aa13.06□□□□□ -0.32
LCOR-209ENST00000540664 SCAF11Q99590 1463 aaKnown RBP13.06□□□□□ -0.32
LCOR-209ENST00000540664 NRXN1Q9ULB1 1477 aa13.06□□□□□ -0.32
LCOR-209ENST00000540664 ADGRB3O60242 1522 aa13.06□□□□□ -0.32
LCOR-209ENST00000540664 RALBP1Q15311 655 aa13.06□□□□□ -0.32
LCOR-209ENST00000540664 FAM9BQ8IZU0 186 aa13.06□□□□□ -0.32
LCOR-209ENST00000540664 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
LCOR-209ENST00000540664 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
LCOR-209ENST00000540664 ABCC3O15438 1527 aa13.05□□□□□ -0.32
LCOR-209ENST00000540664 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms