RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 DISP3Q9P2K9 1392 aa18.85■□□□□ 0.61
INO80E-203ENST00000540562 KDM5CP41229 1560 aa18.85■□□□□ 0.61
INO80E-203ENST00000540562 ERICH6BQ5W0A0 696 aa18.85■□□□□ 0.61
INO80E-203ENST00000540562 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
INO80E-203ENST00000540562 RRP1P56182 461 aaKnown RBP18.84■□□□□ 0.61
INO80E-203ENST00000540562 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
INO80E-203ENST00000540562 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
INO80E-203ENST00000540562 AFAP1Q8N556 730 aa18.84■□□□□ 0.61
INO80E-203ENST00000540562 NLRP13Q86W25 1043 aa18.83■□□□□ 0.6
INO80E-203ENST00000540562 CDC42BPAQ5VT25 1732 aa18.82■□□□□ 0.6
INO80E-203ENST00000540562 ANP32AP39687 249 aaKnown RBP18.82■□□□□ 0.6
INO80E-203ENST00000540562 CCDC146Q8IYE0 955 aa18.82■□□□□ 0.6
INO80E-203ENST00000540562 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
INO80E-203ENST00000540562 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
INO80E-203ENST00000540562 RALGAPBQ86X10 1494 aa18.81■□□□□ 0.6
INO80E-203ENST00000540562 RALBP1Q15311 655 aa18.81■□□□□ 0.6
INO80E-203ENST00000540562 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
INO80E-203ENST00000540562 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
INO80E-203ENST00000540562 ARHGAP5Q13017 1502 aa18.8■□□□□ 0.6
INO80E-203ENST00000540562 ADGBQ8N7X0 1667 aa18.8■□□□□ 0.6
INO80E-203ENST00000540562 C20orf194Q5TEA3 1177 aa18.79■□□□□ 0.6
INO80E-203ENST00000540562 NUP160Q12769 1436 aa18.79■□□□□ 0.6
INO80E-203ENST00000540562 SYCP2Q9BX26 1530 aa18.79■□□□□ 0.6
INO80E-203ENST00000540562 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
INO80E-203ENST00000540562 TNNT2P45379 298 aaPredicted RBP18.78■□□□□ 0.6
INO80E-203ENST00000540562 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
INO80E-203ENST00000540562 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
INO80E-203ENST00000540562 PER1O15534 1290 aaPredicted RBP18.76■□□□□ 0.59
INO80E-203ENST00000540562 TESK2Q96S53 571 aa18.76■□□□□ 0.59
INO80E-203ENST00000540562 CRBNQ96SW2 442 aa18.76■□□□□ 0.59
INO80E-203ENST00000540562 DEKP35659 375 aaKnown RBP18.75■□□□□ 0.59
INO80E-203ENST00000540562 TMF1P82094 1093 aa18.75■□□□□ 0.59
INO80E-203ENST00000540562 ZBTB47Q9UFB7 747 aaPredicted RBP18.75■□□□□ 0.59
INO80E-203ENST00000540562 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
INO80E-203ENST00000540562 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
INO80E-203ENST00000540562 CROCC2H7BZ55 1655 aa18.74■□□□□ 0.59
INO80E-203ENST00000540562 PRAG1Q86YV5 1406 aa18.73■□□□□ 0.59
INO80E-203ENST00000540562 ABCA8O94911 1581 aa18.73■□□□□ 0.59
INO80E-203ENST00000540562 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
INO80E-203ENST00000540562 UHRF1BP1Q6BDS2 1440 aa18.73■□□□□ 0.59
INO80E-203ENST00000540562 PLA2R1Q13018 1463 aa18.72■□□□□ 0.59
INO80E-203ENST00000540562 ARID4BQ4LE39 1312 aaPredicted RBP18.72■□□□□ 0.59
INO80E-203ENST00000540562 SAMD9LQ8IVG5 1584 aa18.72■□□□□ 0.59
INO80E-203ENST00000540562 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
INO80E-203ENST00000540562 SLC4A3P48751 1232 aa18.71■□□□□ 0.59
INO80E-203ENST00000540562 WDR43Q15061 677 aaKnown RBP eCLIP18.71■□□□□ 0.59
INO80E-203ENST00000540562 NEUROD2Q15784 382 aa18.71■□□□□ 0.59
INO80E-203ENST00000540562 A2MP01023 1474 aa18.71■□□□□ 0.59
INO80E-203ENST00000540562 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
INO80E-203ENST00000540562 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
INO80E-203ENST00000540562 RNF123Q5XPI4 1314 aa18.69■□□□□ 0.58
INO80E-203ENST00000540562 IPO9Q96P70 1041 aaKnown RBP18.69■□□□□ 0.58
INO80E-203ENST00000540562 KIF3BO15066 747 aa18.68■□□□□ 0.58
INO80E-203ENST00000540562 POLR1AO95602 1720 aaPredicted RBP18.67■□□□□ 0.58
INO80E-203ENST00000540562 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
INO80E-203ENST00000540562 PDE4AP27815 886 aa18.66■□□□□ 0.58
INO80E-203ENST00000540562 RGS3P49796 1198 aa18.66■□□□□ 0.58
INO80E-203ENST00000540562 TTC37Q6PGP7 1564 aa18.66■□□□□ 0.58
INO80E-203ENST00000540562 ADCY10Q96PN6 1610 aa18.66■□□□□ 0.58
INO80E-203ENST00000540562 PARD3Q8TEW0 1356 aa18.66■□□□□ 0.58
INO80E-203ENST00000540562 KDM5DQ9BY66 1539 aa18.65■□□□□ 0.58
INO80E-203ENST00000540562 CFAP70Q5T0N1 1121 aa18.65■□□□□ 0.58
INO80E-203ENST00000540562 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
INO80E-203ENST00000540562 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.58
INO80E-203ENST00000540562 SHANK2Q9UPX8 1470 aa18.64■□□□□ 0.57
INO80E-203ENST00000540562 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.57
INO80E-203ENST00000540562 CDC42BPBQ9Y5S2 1711 aa18.63■□□□□ 0.57
INO80E-203ENST00000540562 TRAPPC8Q9Y2L5 1435 aa18.63■□□□□ 0.57
INO80E-203ENST00000540562 ARHGEF12Q9NZN5 1544 aa18.63■□□□□ 0.57
INO80E-203ENST00000540562 PPP2R1AP30153 589 aa18.63■□□□□ 0.57
INO80E-203ENST00000540562 RSPH4AQ5TD94 716 aa18.61■□□□□ 0.57
INO80E-203ENST00000540562 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
INO80E-203ENST00000540562 APAF1O14727 1248 aa18.6■□□□□ 0.57
INO80E-203ENST00000540562 SAFB2Q14151 953 aaKnown RBP eCLIP18.6■□□□□ 0.57
INO80E-203ENST00000540562 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
INO80E-203ENST00000540562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.57
INO80E-203ENST00000540562 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.56
INO80E-203ENST00000540562 BCAR3O75815 825 aa18.56■□□□□ 0.56
INO80E-203ENST00000540562 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
INO80E-203ENST00000540562 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
INO80E-203ENST00000540562 RTN4Q9NQC3 1192 aaKnown RBP18.55■□□□□ 0.56
INO80E-203ENST00000540562 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
INO80E-203ENST00000540562 TMEM132EQ6IEE7 984 aa18.55■□□□□ 0.56
INO80E-203ENST00000540562 GGT6Q6P531 493 aa18.55■□□□□ 0.56
INO80E-203ENST00000540562 MAGI2Q86UL8 1455 aa18.54■□□□□ 0.56
INO80E-203ENST00000540562 NEFMP07197 916 aa18.54■□□□□ 0.56
INO80E-203ENST00000540562 BCL2L13Q9BXK5 485 aa18.54■□□□□ 0.56
INO80E-203ENST00000540562 TRPM1Q7Z4N2 1603 aa18.54■□□□□ 0.56
INO80E-203ENST00000540562 ADGRF5Q8IZF2 1346 aa18.54■□□□□ 0.56
INO80E-203ENST00000540562 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
INO80E-203ENST00000540562 AMER1Q5JTC6 1135 aaPredicted RBP18.53■□□□□ 0.56
INO80E-203ENST00000540562 FRAT1Q92837 279 aaPredicted RBP18.53■□□□□ 0.56
INO80E-203ENST00000540562 TCERG1O14776 1098 aaKnown RBP18.52■□□□□ 0.56
INO80E-203ENST00000540562 BACH2Q9BYV9 841 aa18.52■□□□□ 0.56
INO80E-203ENST00000540562 PREX2Q70Z35 1606 aa18.52■□□□□ 0.55
INO80E-203ENST00000540562 GOLGA2Q08379 1002 aa18.51■□□□□ 0.55
INO80E-203ENST00000540562 SCAPERQ9BY12 1400 aa18.51■□□□□ 0.55
INO80E-203ENST00000540562 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
INO80E-203ENST00000540562 CANXP27824 592 aaKnown RBP18.51■□□□□ 0.55
INO80E-203ENST00000540562 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms