RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 ANKRD30AQ9BXX3 1397 aa13.56□□□□□ -0.24
GPD2-213ENST00000540309 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
GPD2-213ENST00000540309 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
GPD2-213ENST00000540309 DAXXQ9UER7 740 aaPredicted RBP13.55□□□□□ -0.24
GPD2-213ENST00000540309 RAPGEF6Q8TEU7 1601 aa13.55□□□□□ -0.24
GPD2-213ENST00000540309 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
GPD2-213ENST00000540309 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
GPD2-213ENST00000540309 CARD11Q9BXL7 1154 aa13.54□□□□□ -0.24
GPD2-213ENST00000540309 PTPRGP23470 1445 aa13.53□□□□□ -0.24
GPD2-213ENST00000540309 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
GPD2-213ENST00000540309 KIAA0556O60303 1618 aa13.53□□□□□ -0.24
GPD2-213ENST00000540309 PDS5BQ9NTI5 1447 aa13.53□□□□□ -0.24
GPD2-213ENST00000540309 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
GPD2-213ENST00000540309 GPRASP1Q5JY77 1395 aa13.52□□□□□ -0.24
GPD2-213ENST00000540309 NUP153P49790 1475 aaKnown RBP13.52□□□□□ -0.24
GPD2-213ENST00000540309 TRPM1Q7Z4N2 1603 aa13.52□□□□□ -0.25
GPD2-213ENST00000540309 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.25
GPD2-213ENST00000540309 ANKRD50Q9ULJ7 1429 aa13.52□□□□□ -0.25
GPD2-213ENST00000540309 KIAA0586Q9BVV6 1533 aa13.51□□□□□ -0.25
GPD2-213ENST00000540309 PER1O15534 1290 aaPredicted RBP13.51□□□□□ -0.25
GPD2-213ENST00000540309 PKD2Q13563 968 aa13.5□□□□□ -0.25
GPD2-213ENST00000540309 GPATCH8Q9UKJ3 1502 aaKnown RBP13.5□□□□□ -0.25
GPD2-213ENST00000540309 ZNF608Q9ULD9 1512 aaPredicted RBP13.5□□□□□ -0.25
GPD2-213ENST00000540309 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
GPD2-213ENST00000540309 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
GPD2-213ENST00000540309 FRAT1Q92837 279 aaPredicted RBP13.49□□□□□ -0.25
GPD2-213ENST00000540309 ZMYM3Q14202 1370 aa13.49□□□□□ -0.25
GPD2-213ENST00000540309 COL17A1Q9UMD9 1497 aaPredicted RBP13.48□□□□□ -0.25
GPD2-213ENST00000540309 CCDC144AA2RUR9 1427 aa13.48□□□□□ -0.25
GPD2-213ENST00000540309 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
GPD2-213ENST00000540309 BRPF3Q9ULD4 1205 aa13.48□□□□□ -0.25
GPD2-213ENST00000540309 EIF2AK4Q9P2K8 1649 aaKnown RBP13.47□□□□□ -0.25
GPD2-213ENST00000540309 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
GPD2-213ENST00000540309 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
GPD2-213ENST00000540309 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
GPD2-213ENST00000540309 PRDM15P57071 1507 aaPredicted RBP13.46□□□□□ -0.25
GPD2-213ENST00000540309 C8orf34Q49A92 452 aa13.45□□□□□ -0.26
GPD2-213ENST00000540309 NGEFQ8N5V2 710 aa13.45□□□□□ -0.26
GPD2-213ENST00000540309 NUP160Q12769 1436 aa13.45□□□□□ -0.26
GPD2-213ENST00000540309 PRAG1Q86YV5 1406 aa13.45□□□□□ -0.26
GPD2-213ENST00000540309 ARHGEF5Q12774 1597 aa13.45□□□□□ -0.26
GPD2-213ENST00000540309 L1TD1Q5T7N2 865 aaKnown RBP13.44□□□□□ -0.26
GPD2-213ENST00000540309 POLR3GLQ9BT43 218 aa13.44□□□□□ -0.26
GPD2-213ENST00000540309 CFDP1Q9UEE9 299 aaPredicted RBP13.44□□□□□ -0.26
GPD2-213ENST00000540309 ZNF644Q9H582 1327 aaPredicted RBP13.43□□□□□ -0.26
GPD2-213ENST00000540309 AAMPQ13685 434 aa13.43□□□□□ -0.26
GPD2-213ENST00000540309 CDC42BPAQ5VT25 1732 aa13.43□□□□□ -0.26
GPD2-213ENST00000540309 NINLQ9Y2I6 1382 aa13.43□□□□□ -0.26
GPD2-213ENST00000540309 ABCC10Q5T3U5 1492 aa13.42□□□□□ -0.26
GPD2-213ENST00000540309 ZNF521Q96K83 1311 aa13.42□□□□□ -0.26
GPD2-213ENST00000540309 NUP155O75694 1391 aa13.42□□□□□ -0.26
GPD2-213ENST00000540309 CDCA7LQ96GN5 454 aa13.41□□□□□ -0.26
GPD2-213ENST00000540309 BECN1Q14457 450 aa13.4□□□□□ -0.27
GPD2-213ENST00000540309 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.27
GPD2-213ENST00000540309 C9orf84Q5VXU9 1444 aa13.39□□□□□ -0.27
GPD2-213ENST00000540309 NPC1L1Q9UHC9 1359 aa13.39□□□□□ -0.27
GPD2-213ENST00000540309 SYNJ2O15056 1496 aa13.39□□□□□ -0.27
GPD2-213ENST00000540309 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
GPD2-213ENST00000540309 TRMT2AQ8IZ69 625 aaKnown RBP13.38□□□□□ -0.27
GPD2-213ENST00000540309 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
GPD2-213ENST00000540309 MAPK8IP3Q9UPT6 1336 aa13.38□□□□□ -0.27
GPD2-213ENST00000540309 GLIPR1L2Q4G1C9 344 aa13.38□□□□□ -0.27
GPD2-213ENST00000540309 ATP10AO60312 1499 aa13.38□□□□□ -0.27
GPD2-213ENST00000540309 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
GPD2-213ENST00000540309 PIK3C2GO75747 1445 aa13.37□□□□□ -0.27
GPD2-213ENST00000540309 FRAT2O75474 233 aaPredicted RBP13.37□□□□□ -0.27
GPD2-213ENST00000540309 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
GPD2-213ENST00000540309 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
GPD2-213ENST00000540309 RNF17Q9BXT8 1623 aaKnown RBP13.37□□□□□ -0.27
GPD2-213ENST00000540309 ABCC2Q92887 1545 aa13.36□□□□□ -0.27
GPD2-213ENST00000540309 PRG4Q92954 1404 aaPredicted RBP13.36□□□□□ -0.27
GPD2-213ENST00000540309 PLIN1O60240 522 aa13.36□□□□□ -0.27
GPD2-213ENST00000540309 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
GPD2-213ENST00000540309 DCAF11Q8TEB1 546 aa13.36□□□□□ -0.27
GPD2-213ENST00000540309 ERBINQ96RT1 1412 aa13.35□□□□□ -0.27
GPD2-213ENST00000540309 FAM135AQ9P2D6 1515 aa13.35□□□□□ -0.27
GPD2-213ENST00000540309 UNC13BO14795 1591 aa13.35□□□□□ -0.27
GPD2-213ENST00000540309 TESK2Q96S53 571 aa13.35□□□□□ -0.27
GPD2-213ENST00000540309 TMF1P82094 1093 aa13.34□□□□□ -0.27
GPD2-213ENST00000540309 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
GPD2-213ENST00000540309 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
GPD2-213ENST00000540309 STAC3Q96MF2 364 aa13.34□□□□□ -0.27
GPD2-213ENST00000540309 CGNL1Q0VF96 1302 aa13.34□□□□□ -0.27
GPD2-213ENST00000540309 SYNMO15061 1565 aa13.33□□□□□ -0.28
GPD2-213ENST00000540309 MAST1Q9Y2H9 1570 aa13.33□□□□□ -0.28
GPD2-213ENST00000540309 NKTRP30414 1462 aaKnown RBP13.33□□□□□ -0.28
GPD2-213ENST00000540309 SLFN5Q08AF3 891 aa13.32□□□□□ -0.28
GPD2-213ENST00000540309 EIF5BO60841 1220 aaKnown RBP13.32□□□□□ -0.28
GPD2-213ENST00000540309 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
GPD2-213ENST00000540309 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
GPD2-213ENST00000540309 SENP3Q9H4L4 574 aaPredicted RBP13.32□□□□□ -0.28
GPD2-213ENST00000540309 MYO5CQ9NQX4 1742 aa13.32□□□□□ -0.28
GPD2-213ENST00000540309 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
GPD2-213ENST00000540309 C20orf194Q5TEA3 1177 aa13.31□□□□□ -0.28
GPD2-213ENST00000540309 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
GPD2-213ENST00000540309 USP19O94966 1318 aa13.31□□□□□ -0.28
GPD2-213ENST00000540309 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
GPD2-213ENST00000540309 CNGB1Q14028 1251 aaPredicted RBP13.31□□□□□ -0.28
GPD2-213ENST00000540309 A2MP01023 1474 aa13.3□□□□□ -0.28
GPD2-213ENST00000540309 IQGAP3Q86VI3 1631 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms