RNA–Protein interactions for RNA: ENST00000540240.1

C16orf62-212, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 3

Gene C16orf62, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-212ENST00000540240 NUP160Q12769 1436 aa13.7□□□□□ -0.22
C16orf62-212ENST00000540240 FHAD1B1AJZ9 1412 aa13.69□□□□□ -0.22
C16orf62-212ENST00000540240 ADAMTS12P58397 1594 aa13.68□□□□□ -0.22
C16orf62-212ENST00000540240 CEP170Q5SW79 1584 aa13.67□□□□□ -0.22
C16orf62-212ENST00000540240 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
C16orf62-212ENST00000540240 BIVM-ERCC5R4GMW8 1640 aa13.67□□□□□ -0.22
C16orf62-212ENST00000540240 NUDT7P0C024 238 aa13.66□□□□□ -0.22
C16orf62-212ENST00000540240 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
C16orf62-212ENST00000540240 RNF166Q96A37 237 aaPredicted RBP13.65□□□□□ -0.22
C16orf62-212ENST00000540240 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
C16orf62-212ENST00000540240 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
C16orf62-212ENST00000540240 TMC2Q8TDI7 906 aa13.62□□□□□ -0.23
C16orf62-212ENST00000540240 MYT1LQ9UL68 1186 aa13.62□□□□□ -0.23
C16orf62-212ENST00000540240 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
C16orf62-212ENST00000540240 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
C16orf62-212ENST00000540240 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
C16orf62-212ENST00000540240 LHX6Q9UPM6 363 aa13.6□□□□□ -0.23
C16orf62-212ENST00000540240 PRG4Q92954 1404 aaPredicted RBP13.58□□□□□ -0.24
C16orf62-212ENST00000540240 SLC34A2O95436 690 aa13.58□□□□□ -0.24
C16orf62-212ENST00000540240 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
C16orf62-212ENST00000540240 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.24
C16orf62-212ENST00000540240 HS6ST3Q8IZP7 471 aa13.54□□□□□ -0.24
C16orf62-212ENST00000540240 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
C16orf62-212ENST00000540240 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
C16orf62-212ENST00000540240 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
C16orf62-212ENST00000540240 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
C16orf62-212ENST00000540240 ABCC10Q5T3U5 1492 aa13.48□□□□□ -0.25
C16orf62-212ENST00000540240 CHGAP10645 457 aaKnown RBP13.48□□□□□ -0.25
C16orf62-212ENST00000540240 MAPKBP1O60336 1514 aa13.47□□□□□ -0.25
C16orf62-212ENST00000540240 KIAA0586Q9BVV6 1533 aa13.47□□□□□ -0.25
C16orf62-212ENST00000540240 KDM4FA0A1W2PPD8 638 aa13.46□□□□□ -0.25
C16orf62-212ENST00000540240 PTGER2P43116 358 aa13.46□□□□□ -0.25
C16orf62-212ENST00000540240 PLPP6Q8IY26 295 aa13.46□□□□□ -0.25
C16orf62-212ENST00000540240 PBX2P40425 430 aa13.45□□□□□ -0.26
C16orf62-212ENST00000540240 FOXK1P85037 733 aa13.45□□□□□ -0.26
C16orf62-212ENST00000540240 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
C16orf62-212ENST00000540240 DSG2Q14126 1118 aa13.44□□□□□ -0.26
C16orf62-212ENST00000540240 KIF27Q86VH2 1401 aa13.44□□□□□ -0.26
C16orf62-212ENST00000540240 IGF1RP08069 1367 aa13.44□□□□□ -0.26
C16orf62-212ENST00000540240 PTCD2Q8WV60 388 aaKnown RBP13.43□□□□□ -0.26
C16orf62-212ENST00000540240 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
C16orf62-212ENST00000540240 CUL7Q14999 1698 aa13.42□□□□□ -0.26
C16orf62-212ENST00000540240 ADCY10Q96PN6 1610 aa13.41□□□□□ -0.26
C16orf62-212ENST00000540240 DIP2BQ9P265 1576 aa13.41□□□□□ -0.26
C16orf62-212ENST00000540240 PTPRGP23470 1445 aa13.39□□□□□ -0.27
C16orf62-212ENST00000540240 CARMIL2Q6F5E8 1435 aa13.37□□□□□ -0.27
C16orf62-212ENST00000540240 KDM6BO15054 1643 aa13.36□□□□□ -0.27
C16orf62-212ENST00000540240 ARHGAP33O14559 1287 aa13.36□□□□□ -0.27
C16orf62-212ENST00000540240 CARMIL1Q5VZK9 1371 aa13.35□□□□□ -0.27
C16orf62-212ENST00000540240 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
C16orf62-212ENST00000540240 PSEN2P49810 448 aa13.34□□□□□ -0.27
C16orf62-212ENST00000540240 DMRTA1Q5VZB9 504 aa13.34□□□□□ -0.27
C16orf62-212ENST00000540240 ADGRD1Q6QNK2 874 aa13.33□□□□□ -0.28
C16orf62-212ENST00000540240 PSDA5PKW4 1024 aaPredicted RBP13.32□□□□□ -0.28
C16orf62-212ENST00000540240 ABCC2Q92887 1545 aa13.31□□□□□ -0.28
C16orf62-212ENST00000540240 PLB1Q6P1J6 1458 aa13.3□□□□□ -0.28
C16orf62-212ENST00000540240 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
C16orf62-212ENST00000540240 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
C16orf62-212ENST00000540240 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
C16orf62-212ENST00000540240 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
C16orf62-212ENST00000540240 CRISPLD2Q9H0B8 497 aa13.28□□□□□ -0.28
C16orf62-212ENST00000540240 GLI2P10070 1586 aa13.28□□□□□ -0.28
C16orf62-212ENST00000540240 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
C16orf62-212ENST00000540240 TBC1D12O60347 775 aa13.27□□□□□ -0.29
C16orf62-212ENST00000540240 OXER1Q8TDS5 423 aa13.27□□□□□ -0.29
C16orf62-212ENST00000540240 ASXL2Q76L83 1435 aa13.27□□□□□ -0.29
C16orf62-212ENST00000540240 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
C16orf62-212ENST00000540240 UACAQ9BZF9 1416 aa13.26□□□□□ -0.29
C16orf62-212ENST00000540240 HRO43593 1189 aa13.25□□□□□ -0.29
C16orf62-212ENST00000540240 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
C16orf62-212ENST00000540240 TK2O00142 265 aa13.22□□□□□ -0.29
C16orf62-212ENST00000540240 PPP1R15BQ5SWA1 713 aa13.22□□□□□ -0.29
C16orf62-212ENST00000540240 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
C16orf62-212ENST00000540240 KCNK17Q96T54 332 aa13.21□□□□□ -0.29
C16orf62-212ENST00000540240 DISP1Q96F81 1524 aa13.21□□□□□ -0.29
C16orf62-212ENST00000540240 KDM5BQ9UGL1 1544 aa13.21□□□□□ -0.29
C16orf62-212ENST00000540240 UGGT2Q9NYU1 1516 aa13.2□□□□□ -0.3
C16orf62-212ENST00000540240 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
C16orf62-212ENST00000540240 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
C16orf62-212ENST00000540240 RYDENQ9NUL5 291 aaKnown RBP13.19□□□□□ -0.3
C16orf62-212ENST00000540240 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
C16orf62-212ENST00000540240 PPRC1Q5VV67 1664 aaKnown RBP13.18□□□□□ -0.3
C16orf62-212ENST00000540240 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
C16orf62-212ENST00000540240 MAP3K4Q9Y6R4 1608 aa13.17□□□□□ -0.3
C16orf62-212ENST00000540240 ZNF454Q8N9F8 522 aa13.16□□□□□ -0.3
C16orf62-212ENST00000540240 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
C16orf62-212ENST00000540240 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
C16orf62-212ENST00000540240 ZCCHC11Q5TAX3 1644 aaKnown RBP13.14□□□□□ -0.31
C16orf62-212ENST00000540240 PDE4AP27815 886 aa13.14□□□□□ -0.31
C16orf62-212ENST00000540240 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
C16orf62-212ENST00000540240 ADGRL1O94910 1474 aa13.14□□□□□ -0.31
C16orf62-212ENST00000540240 KCTD12Q96CX2 325 aaKnown RBP13.13□□□□□ -0.31
C16orf62-212ENST00000540240 GOLGA3Q08378 1498 aa13.12□□□□□ -0.31
C16orf62-212ENST00000540240 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
C16orf62-212ENST00000540240 VPS9D1Q9Y2B5 631 aa13.12□□□□□ -0.31
C16orf62-212ENST00000540240 WDR7Q9Y4E6 1490 aa13.11□□□□□ -0.31
C16orf62-212ENST00000540240 FOSBP53539 338 aa13.11□□□□□ -0.31
C16orf62-212ENST00000540240 LARP6Q9BRS8 491 aaKnown RBP13.11□□□□□ -0.31
C16orf62-212ENST00000540240 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
C16orf62-212ENST00000540240 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms