RNA–Protein interactions for RNA: ENST00000540106.5

LMNTD1-208, Transcript of lamin tail domain containing 1, humanhuman

TSL 4

Gene LMNTD1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-208ENST00000540106 PCDHGA10Q9Y5H3 936 aa11.49□□□□□ -0.57
LMNTD1-208ENST00000540106 ZFRQ96KR1 1074 aaKnown RBP11.48□□□□□ -0.57
LMNTD1-208ENST00000540106 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
LMNTD1-208ENST00000540106 KIAA1468Q9P260 1216 aa11.47□□□□□ -0.57
LMNTD1-208ENST00000540106 LAPTM4AQ15012 233 aa11.46□□□□□ -0.57
LMNTD1-208ENST00000540106 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
LMNTD1-208ENST00000540106 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
LMNTD1-208ENST00000540106 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
LMNTD1-208ENST00000540106 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
LMNTD1-208ENST00000540106 GFRA3O60609 400 aa11.42□□□□□ -0.58
LMNTD1-208ENST00000540106 TRAF7Q6Q0C0 670 aa11.42□□□□□ -0.58
LMNTD1-208ENST00000540106 SEPT9Q9UHD8 586 aaPredicted RBP11.42□□□□□ -0.58
LMNTD1-208ENST00000540106 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.58
LMNTD1-208ENST00000540106 LCE2BO14633 110 aa11.39□□□□□ -0.59
LMNTD1-208ENST00000540106 PHF14O94880 888 aa11.39□□□□□ -0.59
LMNTD1-208ENST00000540106 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
LMNTD1-208ENST00000540106 TSR3Q9UJK0 312 aaKnown RBP11.38□□□□□ -0.59
LMNTD1-208ENST00000540106 HPS5Q9UPZ3 1129 aa11.38□□□□□ -0.59
LMNTD1-208ENST00000540106 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
LMNTD1-208ENST00000540106 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
LMNTD1-208ENST00000540106 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.37□□□□□ -0.59
LMNTD1-208ENST00000540106 LRCH3Q96II8 777 aa11.36□□□□□ -0.59
LMNTD1-208ENST00000540106 MFSD10Q14728 455 aa11.35□□□□□ -0.59
LMNTD1-208ENST00000540106 FAM98CQ17RN3 349 aaKnown RBP11.35□□□□□ -0.59
LMNTD1-208ENST00000540106 C6orf132Q5T0Z8 1188 aa11.35□□□□□ -0.59
LMNTD1-208ENST00000540106 TRIM6-TRIM34B2RNG4 842 aa11.33□□□□□ -0.6
LMNTD1-208ENST00000540106 EPAS1Q99814 870 aa11.3□□□□□ -0.6
LMNTD1-208ENST00000540106 PRKD2Q9BZL6 878 aa11.3□□□□□ -0.6
LMNTD1-208ENST00000540106 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
LMNTD1-208ENST00000540106 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
LMNTD1-208ENST00000540106 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
LMNTD1-208ENST00000540106 NRG2O14511 850 aaPredicted RBP11.27□□□□□ -0.61
LMNTD1-208ENST00000540106 PPP4CP60510 307 aa11.27□□□□□ -0.61
LMNTD1-208ENST00000540106 TJAP1Q5JTD0 557 aa11.23□□□□□ -0.61
LMNTD1-208ENST00000540106 PACS2Q86VP3 889 aa11.23□□□□□ -0.61
LMNTD1-208ENST00000540106 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
LMNTD1-208ENST00000540106 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
LMNTD1-208ENST00000540106 DPYSL4O14531 572 aa11.2□□□□□ -0.62
LMNTD1-208ENST00000540106 DDX12PQ92771 950 aa11.2□□□□□ -0.62
LMNTD1-208ENST00000540106 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
LMNTD1-208ENST00000540106 MTRQ99707 1265 aa11.19□□□□□ -0.62
LMNTD1-208ENST00000540106 TSKSQ9UJT2 592 aa11.19□□□□□ -0.62
LMNTD1-208ENST00000540106 IL21Q9HBE4 155 aa11.18□□□□□ -0.62
LMNTD1-208ENST00000540106 SAMD7Q7Z3H4 446 aa11.17□□□□□ -0.62
LMNTD1-208ENST00000540106 CADPS2Q86UW7 1296 aa11.16□□□□□ -0.62
LMNTD1-208ENST00000540106 PDZRN3Q9UPQ7 1066 aa11.16□□□□□ -0.62
LMNTD1-208ENST00000540106 SMAPO00193 183 aa11.15□□□□□ -0.62
LMNTD1-208ENST00000540106 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.62
LMNTD1-208ENST00000540106 MAP3K7O43318 606 aa11.14□□□□□ -0.63
LMNTD1-208ENST00000540106 TSR1Q2NL82 804 aaKnown RBP11.14□□□□□ -0.63
LMNTD1-208ENST00000540106 CAMK2BQ13554 666 aa11.13□□□□□ -0.63
LMNTD1-208ENST00000540106 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
LMNTD1-208ENST00000540106 ZNF775Q96BV0 537 aaPredicted RBP11.13□□□□□ -0.63
LMNTD1-208ENST00000540106 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
LMNTD1-208ENST00000540106 NBR1Q14596 966 aa11.12□□□□□ -0.63
LMNTD1-208ENST00000540106 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
LMNTD1-208ENST00000540106 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
LMNTD1-208ENST00000540106 RNF40O75150 1001 aa11.09□□□□□ -0.63
LMNTD1-208ENST00000540106 PRSS12P56730 875 aa11.06□□□□□ -0.64
LMNTD1-208ENST00000540106 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
LMNTD1-208ENST00000540106 GGCXP38435 758 aa11.05□□□□□ -0.64
LMNTD1-208ENST00000540106 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
LMNTD1-208ENST00000540106 TATDN2Q93075 761 aa11.05□□□□□ -0.64
LMNTD1-208ENST00000540106 FAM198AQ9UFP1 575 aa11.05□□□□□ -0.64
LMNTD1-208ENST00000540106 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
LMNTD1-208ENST00000540106 APLP1P51693 650 aa11.04□□□□□ -0.64
LMNTD1-208ENST00000540106 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
LMNTD1-208ENST00000540106 C3orf80F5H4A9 247 aa11.02□□□□□ -0.65
LMNTD1-208ENST00000540106 COPS2P61201 443 aa11.01□□□□□ -0.65
LMNTD1-208ENST00000540106 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
LMNTD1-208ENST00000540106 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
LMNTD1-208ENST00000540106 PDIA6Q15084 440 aa10.99□□□□□ -0.65
LMNTD1-208ENST00000540106 NUDT18Q6ZVK8 323 aa10.98□□□□□ -0.65
LMNTD1-208ENST00000540106 SPRYD3Q8NCJ5 442 aa10.98□□□□□ -0.65
LMNTD1-208ENST00000540106 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
LMNTD1-208ENST00000540106 PKDCCQ504Y2 493 aa10.96□□□□□ -0.65
LMNTD1-208ENST00000540106 NECTIN2Q92692 538 aa10.95□□□□□ -0.66
LMNTD1-208ENST00000540106 SPDYE16A6NNV3 312 aaPredicted RBP10.94□□□□□ -0.66
LMNTD1-208ENST00000540106 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
LMNTD1-208ENST00000540106 SLC19A1P41440 591 aa10.93□□□□□ -0.66
LMNTD1-208ENST00000540106 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
LMNTD1-208ENST00000540106 TRIM67Q6ZTA4 783 aa10.93□□□□□ -0.66
LMNTD1-208ENST00000540106 ZPR1O75312 459 aa10.92□□□□□ -0.66
LMNTD1-208ENST00000540106 MYT1Q01538 1121 aa10.91□□□□□ -0.66
LMNTD1-208ENST00000540106 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
LMNTD1-208ENST00000540106 POTECB2RU33 542 aa10.9□□□□□ -0.66
LMNTD1-208ENST00000540106 DGAT1O75907 488 aa10.9□□□□□ -0.66
LMNTD1-208ENST00000540106 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
LMNTD1-208ENST00000540106 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
LMNTD1-208ENST00000540106 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
LMNTD1-208ENST00000540106 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
LMNTD1-208ENST00000540106 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
LMNTD1-208ENST00000540106 SLC4A3P48751 1232 aa10.87□□□□□ -0.67
LMNTD1-208ENST00000540106 RBM27Q9P2N5 1060 aaKnown RBP10.87□□□□□ -0.67
LMNTD1-208ENST00000540106 SPRYD7Q5W111 196 aa10.86□□□□□ -0.67
LMNTD1-208ENST00000540106 EMID1Q96A84 441 aaPredicted RBP10.85□□□□□ -0.67
LMNTD1-208ENST00000540106 PCDHB3Q9Y5E6 796 aa10.85□□□□□ -0.67
LMNTD1-208ENST00000540106 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
LMNTD1-208ENST00000540106 PRR14Q9BWN1 585 aa10.83□□□□□ -0.68
LMNTD1-208ENST00000540106 FAM187AA6NFU0 413 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms