RNA–Protein interactions for RNA: ENST00000539988.1

AC008115.2-201, humanhuman

TSL 3 BASIC

Gene AC008115.2, Length 241 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008115.2-201ENST00000539988 DDX27Q96GQ7 796 aaKnown RBP3.99□□□□□ -1.77
AC008115.2-201ENST00000539988 C8orf37Q96NL8 207 aa3.99□□□□□ -1.77
AC008115.2-201ENST00000539988 PSMD1Q99460 953 aa3.99□□□□□ -1.77
AC008115.2-201ENST00000539988 PRDM16Q9HAZ2 1276 aa3.99□□□□□ -1.77
AC008115.2-201ENST00000539988 MYT1LQ9UL68 1186 aa3.99□□□□□ -1.77
AC008115.2-201ENST00000539988 TMEM88BA6NKF7 163 aa3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 ABCB7O75027 752 aa3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 DNAJC14Q6Y2X3 702 aaPredicted RBP3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 SREK1Q8WXA9 508 aaKnown RBP3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 GLMNQ92990 594 aa3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 TMUB1Q9BVT8 246 aa3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 VRTNQ9H8Y1 702 aa3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 BCCIPQ9P287 314 aaKnown RBP eCLIP3.98□□□□□ -1.77
AC008115.2-201ENST00000539988 CLSTN1O94985 981 aa3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 CSB-PGBD3P0DP91 1061 aa3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 ZNF16P17020 682 aaPredicted RBP3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 PDAP1Q13442 181 aaKnown RBP3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 TTLL12Q14166 644 aaPredicted RBP3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 CFAP70Q5T0N1 1121 aa3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 ZNF662Q6ZS27 426 aa3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 BANK1Q8NDB2 785 aa3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 GDPD2Q9HCC8 539 aa3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 GNEQ9Y223 722 aaKnown RBP3.97□□□□□ -1.77
AC008115.2-201ENST00000539988 LOC102724159A0A0B4J2E5 919 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 ANKRD62A6NC57 917 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 GNPATO15228 680 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 TCF3P15923 654 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 RFX1P22670 979 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 PWP2Q15269 919 aaKnown RBP3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 GIMAP6Q6P9H5 292 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 ZNF467Q7Z7K2 595 aaPredicted RBP3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 ADAMTS19Q8TE59 1207 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 CREBZFQ9NS37 354 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 PHF8Q9UPP1 1060 aa3.96□□□□□ -1.78
AC008115.2-201ENST00000539988 CAPN15O75808 1086 aa3.95□□□□□ -1.78
AC008115.2-201ENST00000539988 NLRP6P59044 892 aa3.95□□□□□ -1.78
AC008115.2-201ENST00000539988 IRX6P78412 446 aaPredicted RBP3.95□□□□□ -1.78
AC008115.2-201ENST00000539988 PDIA6Q15084 440 aa3.95□□□□□ -1.78
AC008115.2-201ENST00000539988 EFCAB3Q8N7B9 438 aa3.95□□□□□ -1.78
AC008115.2-201ENST00000539988 HIRIP3Q9BW71 556 aaPredicted RBP3.95□□□□□ -1.78
AC008115.2-201ENST00000539988 EMILIN3Q9NT22 766 aa3.95□□□□□ -1.78
AC008115.2-201ENST00000539988 POLR3EQ9NVU0 708 aa3.95□□□□□ -1.78
AC008115.2-201ENST00000539988 SPDYE16A6NNV3 312 aaPredicted RBP3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 DPYSL4O14531 572 aa3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 MARCH6O60337 910 aa3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 NCLP19338 710 aaKnown RBP3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 RFC5P40937 340 aa3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 TSR1Q2NL82 804 aaKnown RBP3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 MTMR14Q8NCE2 650 aa3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 SLC52A1Q9NWF4 448 aa3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 PCDHB8Q9UN66 801 aa3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 RIPOR2Q9Y4F9 1068 aa3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 PCDHB13Q9Y5F0 798 aa3.94□□□□□ -1.78
AC008115.2-201ENST00000539988 NUTM2FA1L443 756 aa3.93□□□□□ -1.78
AC008115.2-201ENST00000539988 PSEN1P49768 467 aa3.93□□□□□ -1.78
AC008115.2-201ENST00000539988 HDGFL1Q5TGJ6 251 aa3.93□□□□□ -1.78
AC008115.2-201ENST00000539988 NOL8Q76FK4 1167 aaKnown RBP3.93□□□□□ -1.78
AC008115.2-201ENST00000539988 ZNF526Q8TF50 670 aaPredicted RBP3.93□□□□□ -1.78
AC008115.2-201ENST00000539988 UBXN4Q92575 508 aa3.93□□□□□ -1.78
AC008115.2-201ENST00000539988 SOX12O15370 315 aa3.92□□□□□ -1.78
AC008115.2-201ENST00000539988 HIC1Q14526 733 aa3.92□□□□□ -1.78
AC008115.2-201ENST00000539988 MS4A4AQ96JQ5 239 aa3.92□□□□□ -1.78
AC008115.2-201ENST00000539988 SUGT1Q9Y2Z0 365 aa3.92□□□□□ -1.78
AC008115.2-201ENST00000539988 PLEKHD1A6NEE1 506 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 ATG7O95352 703 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 C7P10643 843 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 ERCC3P19447 782 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 OSBPP22059 807 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 SSTR3P32745 418 aaPredicted RBP3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 ABL2P42684 1182 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 ZC3H6P61129 1189 aaKnown RBP3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 NAALADL2Q58DX5 795 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 MYSM1Q5VVJ2 828 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 PHLDB3Q6NSJ2 640 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 TBC1D2Q9BYX2 928 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 PPP1R12CQ9BZL4 782 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 PPP1R1BQ9UD71 204 aaPredicted RBP3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 TBC1D2BQ9UPU7 963 aa3.91□□□□□ -1.78
AC008115.2-201ENST00000539988 FCHSD2O94868 740 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 VAMP1P23763 118 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 TMEM259Q4ZIN3 620 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 CDCA8Q53HL2 280 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 PPP1R15BQ5SWA1 713 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 PPP2R2DQ66LE6 453 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 DPH6Q7L8W6 267 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 RBM46Q8TBY0 533 aaKnown RBP3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 GIPC2Q8TF65 315 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 BEGAINQ9BUH8 593 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 BCL2L13Q9BXK5 485 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 FARP1Q9Y4F1 1045 aaPredicted RBP3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 PPME1Q9Y570 386 aa3.9□□□□□ -1.79
AC008115.2-201ENST00000539988 SBNO2Q9Y2G9 1366 aa3.89□□□□□ -1.79
AC008115.2-201ENST00000539988 GRXCR2A6NFK2 248 aa3.89□□□□□ -1.79
AC008115.2-201ENST00000539988 RAB11FIP3O75154 756 aa3.89□□□□□ -1.79
AC008115.2-201ENST00000539988 MICAL1Q8TDZ2 1067 aa3.89□□□□□ -1.79
AC008115.2-201ENST00000539988 GPATCH3Q96I76 525 aa3.89□□□□□ -1.79
AC008115.2-201ENST00000539988 PHOX2BQ99453 314 aa3.89□□□□□ -1.79
AC008115.2-201ENST00000539988 PALM3A6NDB9 673 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms