RNA–Protein interactions for RNA: ENST00000539972.5

MDM1-209, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-209ENST00000539972 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
MDM1-209ENST00000539972 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
MDM1-209ENST00000539972 ARIH1Q9Y4X5 557 aaPredicted RBP10.56□□□□□ -0.72
MDM1-209ENST00000539972 PHF14O94880 888 aa10.55□□□□□ -0.72
MDM1-209ENST00000539972 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
MDM1-209ENST00000539972 TYW1BQ6NUM6 668 aa10.53□□□□□ -0.72
MDM1-209ENST00000539972 PDIA6Q15084 440 aa10.52□□□□□ -0.73
MDM1-209ENST00000539972 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
MDM1-209ENST00000539972 EPAS1Q99814 870 aa10.5□□□□□ -0.73
MDM1-209ENST00000539972 SPDYE16A6NNV3 312 aaPredicted RBP10.49□□□□□ -0.73
MDM1-209ENST00000539972 PPP1R3GB7ZBB8 358 aa10.48□□□□□ -0.73
MDM1-209ENST00000539972 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
MDM1-209ENST00000539972 DDX12PQ92771 950 aa10.47□□□□□ -0.73
MDM1-209ENST00000539972 COL9A1P20849 921 aa10.46□□□□□ -0.73
MDM1-209ENST00000539972 STAC3Q96MF2 364 aa10.46□□□□□ -0.73
MDM1-209ENST00000539972 TULP1O00294 542 aaPredicted RBP10.45□□□□□ -0.74
MDM1-209ENST00000539972 SEMA3EO15041 775 aa10.45□□□□□ -0.74
MDM1-209ENST00000539972 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
MDM1-209ENST00000539972 C6orf132Q5T0Z8 1188 aa10.44□□□□□ -0.74
MDM1-209ENST00000539972 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
MDM1-209ENST00000539972 KCTD12Q96CX2 325 aaKnown RBP10.42□□□□□ -0.74
MDM1-209ENST00000539972 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
MDM1-209ENST00000539972 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
MDM1-209ENST00000539972 SMYD5Q6GMV2 418 aa10.4□□□□□ -0.74
MDM1-209ENST00000539972 RBM33Q96EV2 1170 aaKnown RBP10.4□□□□□ -0.74
MDM1-209ENST00000539972 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
MDM1-209ENST00000539972 RABGEF1Q9UJ41 708 aa10.4□□□□□ -0.74
MDM1-209ENST00000539972 MRPL50Q8N5N7 158 aaKnown RBP10.39□□□□□ -0.75
MDM1-209ENST00000539972 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
MDM1-209ENST00000539972 PRIM1P49642 420 aaKnown RBP10.36□□□□□ -0.75
MDM1-209ENST00000539972 MAP3K7O43318 606 aa10.35□□□□□ -0.75
MDM1-209ENST00000539972 MLLT3P42568 568 aaPredicted RBP10.35□□□□□ -0.75
MDM1-209ENST00000539972 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
MDM1-209ENST00000539972 LMOD2Q6P5Q4 547 aa10.35□□□□□ -0.75
MDM1-209ENST00000539972 GRXCR2A6NFK2 248 aa10.34□□□□□ -0.75
MDM1-209ENST00000539972 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
MDM1-209ENST00000539972 WNT2BQ93097 391 aa10.34□□□□□ -0.75
MDM1-209ENST00000539972 KIAA1468Q9P260 1216 aa10.34□□□□□ -0.75
MDM1-209ENST00000539972 GOLGA8CPA6NN73 597 aa10.33□□□□□ -0.76
MDM1-209ENST00000539972 TRIM6-TRIM34B2RNG4 842 aa10.33□□□□□ -0.76
MDM1-209ENST00000539972 OSBPP22059 807 aa10.33□□□□□ -0.76
MDM1-209ENST00000539972 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.33□□□□□ -0.76
MDM1-209ENST00000539972 LAPTM4BQ86VI4 370 aa10.33□□□□□ -0.76
MDM1-209ENST00000539972 TPRNQ4KMQ1 711 aa10.31□□□□□ -0.76
MDM1-209ENST00000539972 PTPN5P54829 565 aa10.3□□□□□ -0.76
MDM1-209ENST00000539972 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
MDM1-209ENST00000539972 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
MDM1-209ENST00000539972 CERKQ8TCT0 537 aa10.28□□□□□ -0.76
MDM1-209ENST00000539972 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
MDM1-209ENST00000539972 PRSS12P56730 875 aa10.26□□□□□ -0.77
MDM1-209ENST00000539972 ZFRQ96KR1 1074 aaKnown RBP10.26□□□□□ -0.77
MDM1-209ENST00000539972 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
MDM1-209ENST00000539972 SEPT9Q9UHD8 586 aaPredicted RBP10.26□□□□□ -0.77
MDM1-209ENST00000539972 FAM98CQ17RN3 349 aaKnown RBP10.25□□□□□ -0.77
MDM1-209ENST00000539972 RBM26Q5T8P6 1007 aaKnown RBP10.25□□□□□ -0.77
MDM1-209ENST00000539972 PACS2Q86VP3 889 aa10.25□□□□□ -0.77
MDM1-209ENST00000539972 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
MDM1-209ENST00000539972 FAM198AQ9UFP1 575 aa10.24□□□□□ -0.77
MDM1-209ENST00000539972 SOWAHBA6NEL2 793 aa10.23□□□□□ -0.77
MDM1-209ENST00000539972 PRKCSHP14314 528 aaPredicted RBP10.23□□□□□ -0.77
MDM1-209ENST00000539972 GPIHBP1Q8IV16 184 aa10.23□□□□□ -0.77
MDM1-209ENST00000539972 BCAMP50895 628 aa10.22□□□□□ -0.77
MDM1-209ENST00000539972 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
MDM1-209ENST00000539972 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
MDM1-209ENST00000539972 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
MDM1-209ENST00000539972 ZC3H15Q8WU90 426 aaKnown RBP10.19□□□□□ -0.78
MDM1-209ENST00000539972 NUTM2FA1L443 756 aa10.18□□□□□ -0.78
MDM1-209ENST00000539972 IFFO2Q5TF58 517 aa10.18□□□□□ -0.78
MDM1-209ENST00000539972 TTC13Q8NBP0 860 aa10.18□□□□□ -0.78
MDM1-209ENST00000539972 TATDN2Q93075 761 aa10.17□□□□□ -0.78
MDM1-209ENST00000539972 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
MDM1-209ENST00000539972 SMAPO00193 183 aa10.16□□□□□ -0.78
MDM1-209ENST00000539972 NYAP1Q6ZVC0 841 aa10.16□□□□□ -0.78
MDM1-209ENST00000539972 LRCH3Q96II8 777 aa10.16□□□□□ -0.78
MDM1-209ENST00000539972 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.16□□□□□ -0.78
MDM1-209ENST00000539972 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
MDM1-209ENST00000539972 PADI6Q6TGC4 694 aa10.14□□□□□ -0.79
MDM1-209ENST00000539972 PNMA3Q9UL41 463 aa10.14□□□□□ -0.79
MDM1-209ENST00000539972 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
MDM1-209ENST00000539972 NUDT18Q6ZVK8 323 aa10.12□□□□□ -0.79
MDM1-209ENST00000539972 HPS5Q9UPZ3 1129 aa10.12□□□□□ -0.79
MDM1-209ENST00000539972 GPR37O15354 613 aa10.11□□□□□ -0.79
MDM1-209ENST00000539972 ZMYND10O75800 440 aa10.11□□□□□ -0.79
MDM1-209ENST00000539972 FCHSD2O94868 740 aa10.11□□□□□ -0.79
MDM1-209ENST00000539972 ITGBL1O95965 494 aaPredicted RBP10.11□□□□□ -0.79
MDM1-209ENST00000539972 PTGDRQ13258 359 aa10.11□□□□□ -0.79
MDM1-209ENST00000539972 SAMD7Q7Z3H4 446 aa10.11□□□□□ -0.79
MDM1-209ENST00000539972 HIC1Q14526 733 aa10.09□□□□□ -0.79
MDM1-209ENST00000539972 BARGINQ6ZT62 677 aa10.07□□□□□ -0.8
MDM1-209ENST00000539972 EYA1Q99502 592 aa10.07□□□□□ -0.8
MDM1-209ENST00000539972 A0A0G2JS52 829 aa10.06□□□□□ -0.8
MDM1-209ENST00000539972 GNPATO15228 680 aa10.06□□□□□ -0.8
MDM1-209ENST00000539972 PPP4CP60510 307 aa10.06□□□□□ -0.8
MDM1-209ENST00000539972 KRI1Q8N9T8 703 aaKnown RBP10.05□□□□□ -0.8
MDM1-209ENST00000539972 HDGFP51858 240 aaKnown RBP10.03□□□□□ -0.8
MDM1-209ENST00000539972 SLC24A3Q9HC58 644 aa10.03□□□□□ -0.8
MDM1-209ENST00000539972 RGS20O76081 388 aa10.01□□□□□ -0.81
MDM1-209ENST00000539972 KCNC4Q03721 635 aa10.01□□□□□ -0.81
MDM1-209ENST00000539972 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
MDM1-209ENST00000539972 SWT1Q5T5J6 900 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms