RNA–Protein interactions for RNA: ENST00000539893.5

VTCN1-207, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

TSL 2 BASIC

Gene VTCN1, Length 2,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-207ENST00000539893 HNRNPMP52272 730 aaKnown RBP eCLIP9.68□□□□□ -0.86
VTCN1-207ENST00000539893 PKD2Q13563 968 aa9.68□□□□□ -0.86
VTCN1-207ENST00000539893 ABCC1P33527 1531 aa9.68□□□□□ -0.86
VTCN1-207ENST00000539893 TSPY4P0CV99 314 aa9.68□□□□□ -0.86
VTCN1-207ENST00000539893 TSPY10P0CW01 314 aa9.68□□□□□ -0.86
VTCN1-207ENST00000539893 NUP155O75694 1391 aa9.68□□□□□ -0.86
VTCN1-207ENST00000539893 MAGI2Q86UL8 1455 aa9.67□□□□□ -0.86
VTCN1-207ENST00000539893 RALGAPBQ86X10 1494 aa9.67□□□□□ -0.86
VTCN1-207ENST00000539893 ARAP3Q8WWN8 1544 aa9.67□□□□□ -0.86
VTCN1-207ENST00000539893 BCANQ96GW7 911 aa9.67□□□□□ -0.86
VTCN1-207ENST00000539893 PLCH2O75038 1416 aa9.66□□□□□ -0.86
VTCN1-207ENST00000539893 C11orf95C9JLR9 678 aaPredicted RBP9.66□□□□□ -0.86
VTCN1-207ENST00000539893 DUOX2Q9NRD8 1548 aa9.65□□□□□ -0.86
VTCN1-207ENST00000539893 TRPM1Q7Z4N2 1603 aa9.64□□□□□ -0.87
VTCN1-207ENST00000539893 KDM2AQ9Y2K7 1162 aa9.64□□□□□ -0.87
VTCN1-207ENST00000539893 SUPT16HQ9Y5B9 1047 aaKnown RBP9.64□□□□□ -0.87
VTCN1-207ENST00000539893 ABCA9Q8IUA7 1624 aa9.63□□□□□ -0.87
VTCN1-207ENST00000539893 LAMC1P11047 1609 aa9.63□□□□□ -0.87
VTCN1-207ENST00000539893 E9PCH4 1651 aa9.63□□□□□ -0.87
VTCN1-207ENST00000539893 ERBINQ96RT1 1412 aa9.62□□□□□ -0.87
VTCN1-207ENST00000539893 KIF7Q2M1P5 1343 aa9.62□□□□□ -0.87
VTCN1-207ENST00000539893 PIAS4Q8N2W9 510 aaPredicted RBP9.62□□□□□ -0.87
VTCN1-207ENST00000539893 DEPDC5O75140 1603 aa9.61□□□□□ -0.87
VTCN1-207ENST00000539893 USP47Q96K76 1375 aa9.61□□□□□ -0.87
VTCN1-207ENST00000539893 ATP10AO60312 1499 aa9.61□□□□□ -0.87
VTCN1-207ENST00000539893 PLA2R1Q13018 1463 aa9.61□□□□□ -0.87
VTCN1-207ENST00000539893 ZFYVE16Q7Z3T8 1539 aa9.6□□□□□ -0.87
VTCN1-207ENST00000539893 INO80Q9ULG1 1556 aaPredicted RBP9.6□□□□□ -0.87
VTCN1-207ENST00000539893 ARID4BQ4LE39 1312 aaPredicted RBP9.59□□□□□ -0.87
VTCN1-207ENST00000539893 WDR7Q9Y4E6 1490 aa9.59□□□□□ -0.87
VTCN1-207ENST00000539893 TRAPPC8Q9Y2L5 1435 aa9.59□□□□□ -0.87
VTCN1-207ENST00000539893 RTEL1-TNFRSF6BF6WH68 1400 aa9.58□□□□□ -0.88
VTCN1-207ENST00000539893 DHX29Q7Z478 1369 aaKnown RBP9.58□□□□□ -0.88
VTCN1-207ENST00000539893 CEP152O94986 1710 aa9.58□□□□□ -0.88
VTCN1-207ENST00000539893 RNF17Q9BXT8 1623 aaKnown RBP9.58□□□□□ -0.88
VTCN1-207ENST00000539893 PRKRIP1Q9H875 184 aaPredicted RBP9.58□□□□□ -0.88
VTCN1-207ENST00000539893 SPHKAPQ2M3C7 1700 aa9.58□□□□□ -0.88
VTCN1-207ENST00000539893 EIF2AK4Q9P2K8 1649 aaKnown RBP9.57□□□□□ -0.88
VTCN1-207ENST00000539893 PRAG1Q86YV5 1406 aa9.57□□□□□ -0.88
VTCN1-207ENST00000539893 A2MP01023 1474 aa9.57□□□□□ -0.88
VTCN1-207ENST00000539893 EFCAB2Q5VUJ9 269 aa9.57□□□□□ -0.88
VTCN1-207ENST00000539893 CCDC144AA2RUR9 1427 aa9.57□□□□□ -0.88
VTCN1-207ENST00000539893 TET3O43151 1660 aa9.56□□□□□ -0.88
VTCN1-207ENST00000539893 VWDEQ8N2E2 1590 aa9.56□□□□□ -0.88
VTCN1-207ENST00000539893 PRDM15P57071 1507 aaPredicted RBP9.56□□□□□ -0.88
VTCN1-207ENST00000539893 GPRASP1Q5JY77 1395 aa9.55□□□□□ -0.88
VTCN1-207ENST00000539893 ATP7AQ04656 1500 aa9.54□□□□□ -0.88
VTCN1-207ENST00000539893 ROCK2O75116 1388 aaKnown RBP9.54□□□□□ -0.88
VTCN1-207ENST00000539893 CCDC184Q52MB2 194 aa9.54□□□□□ -0.88
VTCN1-207ENST00000539893 TRPM2O94759 1503 aa9.54□□□□□ -0.88
VTCN1-207ENST00000539893 MROH1Q8NDA8 1641 aa9.53□□□□□ -0.88
VTCN1-207ENST00000539893 MADDQ8WXG6 1647 aa9.53□□□□□ -0.88
VTCN1-207ENST00000539893 KIDINS220Q9ULH0 1771 aa9.52□□□□□ -0.88
VTCN1-207ENST00000539893 FANCAO15360 1455 aa9.52□□□□□ -0.88
VTCN1-207ENST00000539893 IQGAP1P46940 1657 aa9.52□□□□□ -0.88
VTCN1-207ENST00000539893 NEURL4Q96JN8 1562 aa9.52□□□□□ -0.89
VTCN1-207ENST00000539893 ZNF326Q5BKZ1 582 aaKnown RBP9.52□□□□□ -0.89
VTCN1-207ENST00000539893 CLTCL1P53675 1640 aa9.52□□□□□ -0.89
VTCN1-207ENST00000539893 DCAF11Q8TEB1 546 aa9.52□□□□□ -0.89
VTCN1-207ENST00000539893 CARD11Q9BXL7 1154 aa9.52□□□□□ -0.89
VTCN1-207ENST00000539893 PTPRTO14522 1441 aa9.51□□□□□ -0.89
VTCN1-207ENST00000539893 CFAP74Q9C0B2 1584 aa9.51□□□□□ -0.89
VTCN1-207ENST00000539893 KIAA1210Q9ULL0 1709 aa9.5□□□□□ -0.89
VTCN1-207ENST00000539893 ASXL2Q76L83 1435 aa9.5□□□□□ -0.89
VTCN1-207ENST00000539893 SPAG9O60271 1321 aaKnown RBP9.5□□□□□ -0.89
VTCN1-207ENST00000539893 HNRNPUQ00839 825 aaKnown RBP eCLIP9.5□□□□□ -0.89
VTCN1-207ENST00000539893 IFT172Q9UG01 1749 aa9.5□□□□□ -0.89
VTCN1-207ENST00000539893 COL17A1Q9UMD9 1497 aaPredicted RBP9.49□□□□□ -0.89
VTCN1-207ENST00000539893 CNKSR2Q8WXI2 1034 aa9.49□□□□□ -0.89
VTCN1-207ENST00000539893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.49□□□□□ -0.89
VTCN1-207ENST00000539893 ADGRL1O94910 1474 aa9.49□□□□□ -0.89
VTCN1-207ENST00000539893 KIF1BO60333 1816 aa9.48□□□□□ -0.89
VTCN1-207ENST00000539893 ST20-MTHFSA0A0A6YYL1 179 aa9.48□□□□□ -0.89
VTCN1-207ENST00000539893 SLC4A2P04920 1241 aa9.48□□□□□ -0.89
VTCN1-207ENST00000539893 MRS2Q9HD23 443 aa9.48□□□□□ -0.89
VTCN1-207ENST00000539893 KTN1Q86UP2 1357 aaKnown RBP9.47□□□□□ -0.89
VTCN1-207ENST00000539893 AFAP1Q8N556 730 aa9.47□□□□□ -0.89
VTCN1-207ENST00000539893 ZBED9Q6R2W3 1325 aa9.47□□□□□ -0.89
VTCN1-207ENST00000539893 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
VTCN1-207ENST00000539893 SCAPERQ9BY12 1400 aa9.46□□□□□ -0.89
VTCN1-207ENST00000539893 PPRC1Q5VV67 1664 aaKnown RBP9.46□□□□□ -0.9
VTCN1-207ENST00000539893 EFCAB6Q5THR3 1501 aa9.46□□□□□ -0.9
VTCN1-207ENST00000539893 LMTK2Q8IWU2 1503 aa9.46□□□□□ -0.9
VTCN1-207ENST00000539893 NBPF1Q3BBV0 1214 aa9.45□□□□□ -0.9
VTCN1-207ENST00000539893 MROH2AA6NES4 1674 aa9.45□□□□□ -0.9
VTCN1-207ENST00000539893 NEFLP07196 543 aa9.45□□□□□ -0.9
VTCN1-207ENST00000539893 ZNF518AQ6AHZ1 1483 aa9.44□□□□□ -0.9
VTCN1-207ENST00000539893 RGL3Q3MIN7 710 aa9.44□□□□□ -0.9
VTCN1-207ENST00000539893 TESK2Q96S53 571 aa9.44□□□□□ -0.9
VTCN1-207ENST00000539893 FRMPD1Q5SYB0 1578 aa9.44□□□□□ -0.9
VTCN1-207ENST00000539893 HECW2Q9P2P5 1572 aa9.44□□□□□ -0.9
VTCN1-207ENST00000539893 FAM9BQ8IZU0 186 aa9.43□□□□□ -0.9
VTCN1-207ENST00000539893 MAP3K4Q9Y6R4 1608 aa9.43□□□□□ -0.9
VTCN1-207ENST00000539893 MYOM1P52179 1685 aa9.43□□□□□ -0.9
VTCN1-207ENST00000539893 BRD4O60885 1362 aaPredicted RBP9.42□□□□□ -0.9
VTCN1-207ENST00000539893 LRPPRCP42704 1394 aaKnown RBP9.42□□□□□ -0.9
VTCN1-207ENST00000539893 ABCA6Q8N139 1617 aa9.42□□□□□ -0.9
VTCN1-207ENST00000539893 KANK1Q14678 1352 aa9.42□□□□□ -0.9
VTCN1-207ENST00000539893 PARD3Q8TEW0 1356 aa9.42□□□□□ -0.9
VTCN1-207ENST00000539893 DISP3Q9P2K9 1392 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms