RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 DHX29Q7Z478 1369 aaKnown RBP31.86■■■□□ 2.69
HOMER3-204ENST00000539827 GLI2P10070 1586 aa31.86■■■□□ 2.69
HOMER3-204ENST00000539827 KDM5CP41229 1560 aa31.84■■■□□ 2.69
HOMER3-204ENST00000539827 KIF3BO15066 747 aa31.83■■■□□ 2.69
HOMER3-204ENST00000539827 FAM69CQ0P6D2 419 aa31.82■■■□□ 2.68
HOMER3-204ENST00000539827 PLA2R1Q13018 1463 aa31.81■■■□□ 2.68
HOMER3-204ENST00000539827 DEPDC5O75140 1603 aa31.81■■■□□ 2.68
HOMER3-204ENST00000539827 RAPGEF3O95398 923 aa31.79■■■□□ 2.68
HOMER3-204ENST00000539827 HSPA5P11021 654 aaKnown RBP31.78■■■□□ 2.68
HOMER3-204ENST00000539827 CCDC144AA2RUR9 1427 aa31.78■■■□□ 2.68
HOMER3-204ENST00000539827 DIP2BQ9P265 1576 aa31.78■■■□□ 2.68
HOMER3-204ENST00000539827 EIF2AK4Q9P2K8 1649 aaKnown RBP31.78■■■□□ 2.68
HOMER3-204ENST00000539827 MLH3Q9UHC1 1453 aa31.77■■■□□ 2.68
HOMER3-204ENST00000539827 HECW2Q9P2P5 1572 aa31.76■■■□□ 2.68
HOMER3-204ENST00000539827 DDX10Q13206 875 aaKnown RBP31.76■■■□□ 2.67
HOMER3-204ENST00000539827 ZNF326Q5BKZ1 582 aaKnown RBP31.76■■■□□ 2.67
HOMER3-204ENST00000539827 A2MP01023 1474 aa31.75■■■□□ 2.67
HOMER3-204ENST00000539827 KANK1Q14678 1352 aa31.74■■■□□ 2.67
HOMER3-204ENST00000539827 EIF4G2P78344 907 aaKnown RBP eCLIP31.74■■■□□ 2.67
HOMER3-204ENST00000539827 E9PCH4 1651 aa31.72■■■□□ 2.67
HOMER3-204ENST00000539827 KDM2AQ9Y2K7 1162 aa31.7■■■□□ 2.67
HOMER3-204ENST00000539827 VWDEQ8N2E2 1590 aa31.7■■■□□ 2.67
HOMER3-204ENST00000539827 MROH1Q8NDA8 1641 aa31.7■■■□□ 2.66
HOMER3-204ENST00000539827 ATP10AO60312 1499 aa31.69■■■□□ 2.66
HOMER3-204ENST00000539827 ABCA6Q8N139 1617 aa31.68■■■□□ 2.66
HOMER3-204ENST00000539827 DCAF11Q8TEB1 546 aa31.68■■■□□ 2.66
HOMER3-204ENST00000539827 PRDM15P57071 1507 aaPredicted RBP31.67■■■□□ 2.66
HOMER3-204ENST00000539827 TET3O43151 1660 aa31.67■■■□□ 2.66
HOMER3-204ENST00000539827 RICTORQ6R327 1708 aa31.66■■■□□ 2.66
HOMER3-204ENST00000539827 TSPOAP1O95153 1857 aa31.66■■■□□ 2.66
HOMER3-204ENST00000539827 FRMPD1Q5SYB0 1578 aa31.66■■■□□ 2.66
HOMER3-204ENST00000539827 UHRF1BP1Q6BDS2 1440 aa31.66■■■□□ 2.66
HOMER3-204ENST00000539827 RGL3Q3MIN7 710 aa31.65■■■□□ 2.66
HOMER3-204ENST00000539827 PPRC1Q5VV67 1664 aaKnown RBP31.6■■■□□ 2.65
HOMER3-204ENST00000539827 RNF17Q9BXT8 1623 aaKnown RBP31.59■■■□□ 2.65
HOMER3-204ENST00000539827 DIP2CQ9Y2E4 1556 aa31.58■■■□□ 2.65
HOMER3-204ENST00000539827 SPHKAPQ2M3C7 1700 aa31.58■■■□□ 2.65
HOMER3-204ENST00000539827 PTPRTO14522 1441 aa31.57■■■□□ 2.64
HOMER3-204ENST00000539827 TRPM2O94759 1503 aa31.56■■■□□ 2.64
HOMER3-204ENST00000539827 GGT6Q6P531 493 aa31.56■■■□□ 2.64
HOMER3-204ENST00000539827 RALGAPBQ86X10 1494 aa31.55■■■□□ 2.64
HOMER3-204ENST00000539827 SPATA31E1Q6ZUB1 1445 aa31.55■■■□□ 2.64
HOMER3-204ENST00000539827 CEP152O94986 1710 aa31.54■■■□□ 2.64
HOMER3-204ENST00000539827 YEATS2Q9ULM3 1422 aa31.53■■■□□ 2.64
HOMER3-204ENST00000539827 WASHC2AQ641Q2 1341 aa31.53■■■□□ 2.64
HOMER3-204ENST00000539827 BCORL1Q5H9F3 1711 aa31.51■■■□□ 2.63
HOMER3-204ENST00000539827 CLTCL1P53675 1640 aa31.5■■■□□ 2.63
HOMER3-204ENST00000539827 EFCAB6Q5THR3 1501 aa31.5■■■□□ 2.63
HOMER3-204ENST00000539827 LMTK2Q8IWU2 1503 aa31.5■■■□□ 2.63
HOMER3-204ENST00000539827 KIF13AQ9H1H9 1805 aa31.5■■■□□ 2.63
HOMER3-204ENST00000539827 C11orf95C9JLR9 678 aaPredicted RBP31.49■■■□□ 2.63
HOMER3-204ENST00000539827 PRAG1Q86YV5 1406 aa31.49■■■□□ 2.63
HOMER3-204ENST00000539827 YTHDC1Q96MU7 727 aaKnown RBP31.48■■■□□ 2.63
HOMER3-204ENST00000539827 USP47Q96K76 1375 aa31.48■■■□□ 2.63
HOMER3-204ENST00000539827 CARD11Q9BXL7 1154 aa31.47■■■□□ 2.63
HOMER3-204ENST00000539827 ZMYM4Q5VZL5 1548 aa31.44■■■□□ 2.62
HOMER3-204ENST00000539827 CCDC7Q96M83 1385 aa31.42■■■□□ 2.62
HOMER3-204ENST00000539827 TRPM1Q7Z4N2 1603 aa31.41■■■□□ 2.62
HOMER3-204ENST00000539827 ROCK2O75116 1388 aaKnown RBP31.41■■■□□ 2.62
HOMER3-204ENST00000539827 WASHC2CQ9Y4E1 1318 aa31.41■■■□□ 2.62
HOMER3-204ENST00000539827 ABCC3O15438 1527 aa31.39■■■□□ 2.62
HOMER3-204ENST00000539827 UGGT1Q9NYU2 1555 aa31.39■■■□□ 2.62
HOMER3-204ENST00000539827 NBPF1Q3BBV0 1214 aa31.36■■■□□ 2.61
HOMER3-204ENST00000539827 NPATQ14207 1427 aa31.35■■■□□ 2.61
HOMER3-204ENST00000539827 KIF7Q2M1P5 1343 aa31.35■■■□□ 2.61
HOMER3-204ENST00000539827 ANP32CO43423 234 aa31.34■■■□□ 2.61
HOMER3-204ENST00000539827 CFAP65Q6ZU64 1925 aaKnown RBP31.34■■■□□ 2.61
HOMER3-204ENST00000539827 POLR1AO95602 1720 aaPredicted RBP31.33■■■□□ 2.61
HOMER3-204ENST00000539827 CENPBP07199 599 aaPredicted RBP31.32■■■□□ 2.6
HOMER3-204ENST00000539827 CAMSAP1Q5T5Y3 1602 aa31.31■■■□□ 2.6
HOMER3-204ENST00000539827 COL17A1Q9UMD9 1497 aaPredicted RBP31.3■■■□□ 2.6
HOMER3-204ENST00000539827 KIF1BO60333 1816 aa31.29■■■□□ 2.6
HOMER3-204ENST00000539827 ST20-MTHFSA0A0A6YYL1 179 aa31.28■■■□□ 2.6
HOMER3-204ENST00000539827 CNTLNQ9NXG0 1405 aa31.27■■■□□ 2.6
HOMER3-204ENST00000539827 GPRASP1Q5JY77 1395 aa31.27■■■□□ 2.6
HOMER3-204ENST00000539827 MADDQ8WXG6 1647 aa31.26■■■□□ 2.59
HOMER3-204ENST00000539827 NEURL4Q96JN8 1562 aa31.25■■■□□ 2.59
HOMER3-204ENST00000539827 POLR3GLQ9BT43 218 aa31.23■■■□□ 2.59
HOMER3-204ENST00000539827 MROH2AA6NES4 1674 aa31.23■■■□□ 2.59
HOMER3-204ENST00000539827 ZC3H13Q5T200 1668 aaKnown RBP31.22■■■□□ 2.59
HOMER3-204ENST00000539827 CHGAP10645 457 aaKnown RBP31.22■■■□□ 2.59
HOMER3-204ENST00000539827 LAMC1P11047 1609 aa31.22■■■□□ 2.59
HOMER3-204ENST00000539827 SIGLEC1Q9BZZ2 1709 aa31.22■■■□□ 2.59
HOMER3-204ENST00000539827 STAC3Q96MF2 364 aa31.21■■■□□ 2.59
HOMER3-204ENST00000539827 TRHP20396 242 aaPredicted RBP31.19■■■□□ 2.58
HOMER3-204ENST00000539827 REREQ9P2R6 1566 aa31.19■■■□□ 2.58
HOMER3-204ENST00000539827 NOS1P29475 1434 aa31.18■■■□□ 2.58
HOMER3-204ENST00000539827 ARHGAP31Q2M1Z3 1444 aa31.17■■■□□ 2.58
HOMER3-204ENST00000539827 CCER2I3L3R5 266 aa31.16■■■□□ 2.58
HOMER3-204ENST00000539827 ADGRB3O60242 1522 aa31.15■■■□□ 2.58
HOMER3-204ENST00000539827 AGLP35573 1532 aa31.15■■■□□ 2.58
HOMER3-204ENST00000539827 ARID4BQ4LE39 1312 aaPredicted RBP31.15■■■□□ 2.58
HOMER3-204ENST00000539827 SYNMO15061 1565 aa31.13■■■□□ 2.57
HOMER3-204ENST00000539827 IFT172Q9UG01 1749 aa31.13■■■□□ 2.57
HOMER3-204ENST00000539827 ARHGEF40Q8TER5 1519 aa31.12■■■□□ 2.57
HOMER3-204ENST00000539827 ADGRF5Q8IZF2 1346 aa31.12■■■□□ 2.57
HOMER3-204ENST00000539827 MYOM2P54296 1465 aa31.11■■■□□ 2.57
HOMER3-204ENST00000539827 MLECQ14165 292 aa31.08■■■□□ 2.57
HOMER3-204ENST00000539827 PIK3C2BO00750 1634 aa31.07■■■□□ 2.56
HOMER3-204ENST00000539827 PREX1Q8TCU6 1659 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms