RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	TPM2	P07951	284 aa		11.16	□□□□□ -0.62
ECHDC2-222	ENST00000539680	NLRP13	Q86W25	1043 aa		11.16	□□□□□ -0.62
ECHDC2-222	ENST00000539680	ABCC8	Q09428	1581 aa		11.16	□□□□□ -0.62
ECHDC2-222	ENST00000539680	MFAP1	P55081	439 aa	Known RBP	11.16	□□□□□ -0.62
ECHDC2-222	ENST00000539680	CEP89	Q96ST8	783 aa		11.16	□□□□□ -0.62
ECHDC2-222	ENST00000539680	RTN4	Q9NQC3	1192 aa	Known RBP	11.15	□□□□□ -0.62
ECHDC2-222	ENST00000539680		A0A0U1RQG5	324 aa	Predicted RBP	11.15	□□□□□ -0.62
ECHDC2-222	ENST00000539680	AMPH	P49418	695 aa		11.15	□□□□□ -0.62
ECHDC2-222	ENST00000539680	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.15	□□□□□ -0.62
ECHDC2-222	ENST00000539680	RBM19	Q9Y4C8	960 aa	Known RBP	11.15	□□□□□ -0.62
ECHDC2-222	ENST00000539680	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.15	□□□□□ -0.62
ECHDC2-222	ENST00000539680	NGDN	Q8NEJ9	315 aa	Known RBP	11.15	□□□□□ -0.62
ECHDC2-222	ENST00000539680	ATP6V1D	Q9Y5K8	247 aa		11.14	□□□□□ -0.63
ECHDC2-222	ENST00000539680	CCDC9	Q9Y3X0	531 aa	Known RBP	11.14	□□□□□ -0.63
ECHDC2-222	ENST00000539680	WASHC2C	Q9Y4E1	1318 aa		11.14	□□□□□ -0.63
ECHDC2-222	ENST00000539680	KIF3B	O15066	747 aa		11.13	□□□□□ -0.63
ECHDC2-222	ENST00000539680	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.13	□□□□□ -0.63
ECHDC2-222	ENST00000539680	CCDC144A	A2RUR9	1427 aa		11.13	□□□□□ -0.63
ECHDC2-222	ENST00000539680	AMOTL1	Q8IY63	956 aa		11.13	□□□□□ -0.63
ECHDC2-222	ENST00000539680	IPO9	Q96P70	1041 aa	Known RBP	11.13	□□□□□ -0.63
ECHDC2-222	ENST00000539680	ROCK1	Q13464	1354 aa		11.12	□□□□□ -0.63
ECHDC2-222	ENST00000539680	MARCH6	O60337	910 aa		11.12	□□□□□ -0.63
ECHDC2-222	ENST00000539680	MROH2B	Q7Z745	1585 aa		11.12	□□□□□ -0.63
ECHDC2-222	ENST00000539680	C1orf141	Q5JVX7	400 aa		11.11	□□□□□ -0.63
ECHDC2-222	ENST00000539680	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.11	□□□□□ -0.63
ECHDC2-222	ENST00000539680	NGEF	Q8N5V2	710 aa		11.11	□□□□□ -0.63
ECHDC2-222	ENST00000539680	TSR1	Q2NL82	804 aa	Known RBP	11.11	□□□□□ -0.63
ECHDC2-222	ENST00000539680	EVC2	Q86UK5	1308 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	TPM1	P09493	284 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	CGNL1	Q0VF96	1302 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680		H3BQV1	296 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	IFFO2	Q5TF58	517 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	SLC4A10	Q6U841	1118 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	SF3A1	Q15459	793 aa	Known RBP	11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	CCDC70	Q6NSX1	233 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	NOL10	Q9BSC4	688 aa	Known RBP	11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680		E9PSI1	815 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	AKAP17A	Q02040	695 aa	Known RBP	11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	SYNE3	Q6ZMZ3	975 aa		11.1	□□□□□ -0.63
ECHDC2-222	ENST00000539680	FOXD1	Q16676	465 aa		11.09	□□□□□ -0.63
ECHDC2-222	ENST00000539680	TPD52L1	Q16890	204 aa	Predicted RBP	11.09	□□□□□ -0.63
ECHDC2-222	ENST00000539680	NCBP3	Q53F19	620 aa	Known RBP	11.09	□□□□□ -0.63
ECHDC2-222	ENST00000539680	SET	Q01105	290 aa	Predicted RBP	11.09	□□□□□ -0.63
ECHDC2-222	ENST00000539680	KANK4	Q5T7N3	995 aa	Predicted RBP	11.09	□□□□□ -0.63
ECHDC2-222	ENST00000539680	COG3	Q96JB2	828 aa		11.09	□□□□□ -0.63
ECHDC2-222	ENST00000539680	RUFY2	Q8WXA3	655 aa		11.09	□□□□□ -0.63
ECHDC2-222	ENST00000539680	FRAT2	O75474	233 aa	Predicted RBP	11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	SLK	Q9H2G2	1235 aa	Predicted RBP	11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	CCDC47	Q96A33	483 aa	Known RBP	11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	PRM3	Q9NNZ6	103 aa		11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	VGF	O15240	615 aa	Predicted RBP	11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	TNNT3	P45378	269 aa	Predicted RBP	11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	FAM184A	Q8NB25	1140 aa		11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	CUX1	P39880	1505 aa		11.08	□□□□□ -0.64
ECHDC2-222	ENST00000539680	GTF2E1	P29083	439 aa	Predicted RBP	11.07	□□□□□ -0.64
ECHDC2-222	ENST00000539680	TOMM22	Q9NS69	142 aa		11.07	□□□□□ -0.64
ECHDC2-222	ENST00000539680	CADPS	Q9ULU8	1353 aa		11.07	□□□□□ -0.64
ECHDC2-222	ENST00000539680	FHOD3	Q2V2M9	1422 aa		11.07	□□□□□ -0.64
ECHDC2-222	ENST00000539680	GPS2	Q13227	327 aa		11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	VPS53	Q5VIR6	699 aa		11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	GZF1	Q9H116	711 aa	Predicted RBP	11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	HOOK1	Q9UJC3	728 aa	Known RBP	11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	ZKSCAN2	Q63HK3	967 aa		11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	CCDC146	Q8IYE0	955 aa		11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	TDRD9	Q8NDG6	1382 aa	Known RBP	11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	WWC1	Q8IX03	1113 aa		11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	TRIM34	Q9BYJ4	488 aa		11.06	□□□□□ -0.64
ECHDC2-222	ENST00000539680	NEXN	Q0ZGT2	675 aa		11.05	□□□□□ -0.64
ECHDC2-222	ENST00000539680	GOLGA6L19	H0YKK7	550 aa		11.05	□□□□□ -0.64
ECHDC2-222	ENST00000539680	TRIM29	Q14134	588 aa		11.05	□□□□□ -0.64
ECHDC2-222	ENST00000539680	CPLX2	Q6PUV4	134 aa	Known RBP	11.05	□□□□□ -0.64
ECHDC2-222	ENST00000539680	L3MBTL2	Q969R5	705 aa		11.05	□□□□□ -0.64
ECHDC2-222	ENST00000539680	FAM161A	Q3B820	660 aa		11.05	□□□□□ -0.64
ECHDC2-222	ENST00000539680	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.05	□□□□□ -0.64
ECHDC2-222	ENST00000539680	STAC3	Q96MF2	364 aa		11.04	□□□□□ -0.64
ECHDC2-222	ENST00000539680	TTC5	Q8N0Z6	440 aa		11.04	□□□□□ -0.64
ECHDC2-222	ENST00000539680	AAMP	Q13685	434 aa		11.04	□□□□□ -0.64
ECHDC2-222	ENST00000539680	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
ECHDC2-222	ENST00000539680	ANKRD20A12P	Q8NF67	263 aa		11.04	□□□□□ -0.64
ECHDC2-222	ENST00000539680	TCEAL9	Q9UHQ7	104 aa		11.04	□□□□□ -0.64
ECHDC2-222	ENST00000539680	DIAPH3	Q9NSV4	1193 aa		11.03	□□□□□ -0.64
ECHDC2-222	ENST00000539680	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.03	□□□□□ -0.64
ECHDC2-222	ENST00000539680	DDX58	O95786	925 aa	Known RBP	11.03	□□□□□ -0.64
ECHDC2-222	ENST00000539680	CREBRF	Q8IUR6	639 aa		11.03	□□□□□ -0.64
ECHDC2-222	ENST00000539680	REC8	O95072	547 aa		11.03	□□□□□ -0.64
ECHDC2-222	ENST00000539680	WIZ	O95785	1651 aa		11.02	□□□□□ -0.64
ECHDC2-222	ENST00000539680	EVA1C	P58658	441 aa		11.02	□□□□□ -0.64
ECHDC2-222	ENST00000539680	API5	Q9BZZ5	524 aa	Known RBP	11.02	□□□□□ -0.65
ECHDC2-222	ENST00000539680	DDX19B	Q9UMR2	479 aa		11.02	□□□□□ -0.65
ECHDC2-222	ENST00000539680	RNF20	Q5VTR2	975 aa		11.01	□□□□□ -0.65
ECHDC2-222	ENST00000539680	RILPL2	Q969X0	211 aa		11.01	□□□□□ -0.65
ECHDC2-222	ENST00000539680	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.01	□□□□□ -0.65
ECHDC2-222	ENST00000539680	ZKSCAN1	P17029	563 aa	Predicted RBP	11.01	□□□□□ -0.65
ECHDC2-222	ENST00000539680	HSP90AB4P	Q58FF6	505 aa		11.01	□□□□□ -0.65
ECHDC2-222	ENST00000539680	MIA2	Q96PC5	1412 aa		11.01	□□□□□ -0.65
ECHDC2-222	ENST00000539680	BECN2	A8MW95	431 aa		11.01	□□□□□ -0.65
ECHDC2-222	ENST00000539680	PANK3	Q9H999	370 aa		11.01	□□□□□ -0.65
ECHDC2-222	ENST00000539680	NOL8	Q76FK4	1167 aa	Known RBP	11	□□□□□ -0.65
ECHDC2-222	ENST00000539680	TEF	Q10587	303 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms